HHsearch alignment for GI: 254781102 and conserved domain: PRK11929

>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional.
Probab=100.00  E-value=0  Score=600.64  Aligned_cols=412  Identities=22%  Similarity=0.285  Sum_probs=335.6

Q ss_pred             CCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHH
Q ss_conf             57430024530231468988998038876768889999985988999847322333432234797099979989999999
Q gi|254781102|r   26 RERKINEVSSDSRHIQAGWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYSLQDFSATIRSNTPILVVDNTRKFLSLF  105 (497)
Q Consensus        26 ~d~~i~~i~~DSr~v~~g~lFval~G~~~dGh~fi~~A~~~GA~~~i~~~~~~~~~~~~~~~~~~p~i~V~d~~~aL~~l  105 (497)
T Consensus       510 ~~~~~~~isiDSR~v~~GdlFvAlkG~~~DGH~Fi~~Ai~~GA~~~vv~~~~~--------~~~~p~I~V~Dt~~AL~~l  581 (953)
T PRK11929        510 LKEISGAVSTDSRSIGRGEIFVALKGENFDGHAYLPQAFSAGACAAVVAHQVA--------DVALPQLVLGDTLAALGRM  581 (953)
T ss_pred             HHHHCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCC--------CCCCCEEEECCHHHHHHHH
T ss_conf             78761856743773688988999714877779999999986997999925666--------6788979968989999999


Q ss_pred             HHHHHCCCCCCEEEEEEEECCCEEHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             9998276200224565430652000123333321023222-223454433235544576753122111111101122333
Q gi|254781102|r  106 ASRLYGKHPENILAVTGTSGKSSVASFVQQICQRSGLSSF-QIGPTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVTH  184 (497)
Q Consensus       106 a~~~~~~~~~~vIgITGTnGKTTt~~~l~~iL~~~g~~~~-~~g~~~~~~~~~~~~~~TtP~~~~l~~~l~~~~~~g~~~  184 (497)
T Consensus       582 A~~~r~~~~~~vIgITGSnGKTTTKeml~~iLs~~~~~~~~v~~t~gN~NN-----~iGvP--ltll~l-----~~~~~~  649 (953)
T PRK11929        582 ATAWRSSFSLPVIAITGSNGKTTTKEMIAAILAQWQGDDGRVTATEGNFNN-----EIGVP--LTLLRL-----RARHRA  649 (953)
T ss_pred             HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC-----CCCCC--HHHHCC-----CCCCHH
T ss_conf             999997579978999678850789999999998517778438855674378-----66671--787579-----963465


Q ss_pred             CCCCCC-HHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             335667-66655543104-3212111232154554321101122345542100000012232111254200012221023
Q gi|254781102|r  185 VSVEAS-SHGLDQHRLDG-IKLIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHN  262 (497)
Q Consensus       185 ~vlEvS-S~gl~~~rl~~-i~~diaviTNI~~dHLd~~gs~e~y~~aK~~If~~~~~~~~~~ViN~Dd~~~~~l~~~~~~  262 (497)
T Consensus       650 aVlEmGms~~GEI~~L~~i~~PdiaVITNIg~aHLe~fgs~e~Ia~aK~eIf~~-l~~~g~aIlN~DD~~~~~~~~~~~~  728 (953)
T PRK11929        650 AVFELGMNHPGEIARLAAIAAPTVALVTNAQREHQEFLHSVEAVARANGALINA-LPEDGIAVVNGDDPYAAIWAKLAGA  728 (953)
T ss_pred             HHHHHCCCCCCHHHHHHCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHC-CCCCCEEEEECCCHHHHHHHHHHCC
T ss_conf             787652896226998606258977887445699876618999999999999831-5879799993886889999998457


Q ss_pred             CCCCCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf             56532222233-33220000001454443211222100101223433222110577888775202676763111234433
Q gi|254781102|r  263 AGCRVLSVGYQ-GKFIHLKKVCAIHNKQQVTISVEGKDFDFLFPLPGEFQVYNALVAAGLCIAIGIDSALVLEHLEKLHV  341 (497)
Q Consensus       263 ~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~l~G~hni~NalaAia~a~~lGi~~~~i~~~L~~f~~  341 (497)
T Consensus       729 ~~i~~fg~~~~~~adi~~~~i~~~~~g~~~~~~~~~~~~~v~l~l~G~hnv~NaLaAiAva~~lGi~~~~i~~~L~~~~~  808 (953)
T PRK11929        729 RRVLRFGLSLQPGLDVYAEDIVTQAAGTLCFVVTPAGSAYVDLPVPGEHNLRNALAAIAIGLAAGAPLHQIIAALEGFQA  808 (953)
T ss_pred             CCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             87599985258987689999898689649999978956999956897999999999999999939999999999866999


Q ss_pred             HHHHHCCCCCCCCCCEEEEC-CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCC---CCCHHHHHHHHHHH-HCCEEEEC
Q ss_conf             45521000135578602300-037868999974121100234440354026654---60046899999986-19899990
Q gi|254781102|r  342 VPGRFEFVGTNSRGGRIYVD-YAHTSNSLEMILKNIRTITSGRIIVVFGCGGDR---DQGKRPIMGKIALD-LADIAIVT  416 (497)
Q Consensus       342 ~~gR~E~i~~~~~~~~viiD-yahNP~s~~~aL~~l~~~~~~r~i~V~G~~Gdr---d~~kr~~mg~~a~~-~ad~vi~t  416 (497)
T Consensus       809 ~~gR~e~~~~-~~g~~iIDDsYNANP~Sm~aAl~~L~~~~~~~kiaVLGdM~ELG~~s~~~H~~ig~~~~~~~id~v~~v  887 (953)
T PRK11929        809 VKGRMQRRQL-SDGTVIIDDTYNANPDSMRAAIDVLARLPGPKRALVLGDMLELGDNGPAMHREVGDYAREHSIDALITL  887 (953)
T ss_pred             CCCCCEEEEE-CCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             9998789995-799799997848889999999999852879986999848500245789999999999997599999998


Q ss_pred             CCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf             88798989899999998347980997898999999999658988999944
Q gi|254781102|r  417 DDNPRSEDPEKIRAEIIHGIPGFIEKGNRIEAIRTAIEMLNKQDVLVVAG  466 (497)
Q Consensus       417 ~d~~r~e~~~~I~~~i~~g~~~~~~~~dr~eAi~~A~~~a~~gDvili~G  466 (497)
T Consensus       888 G-----~~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~l~~~d~VLVKG  930 (953)
T PRK11929        888 G-----EASRDAAHAF--GKAARACFASVDEIIAALRGLLPSSDIVLIKG  930 (953)
T ss_pred             C-----HHHHHHHHHC--CCCCEEEECCHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             6-----5799998656--84657883999999999985589999999971