HHsearch alignment for GI: 254781102 and conserved domain: TIGR01499

>TIGR01499 folC FolC bifunctional protein; InterPro: IPR001645 Folylpolyglutamate synthase 6.3.2.17 from EC (FPGS) is responsible for the addition of a polyglutamate tail to folate and folate derivatives, is an ATP-dependent enzyme isolated from eukaryotic and bacterial sources, where it plays a key role in the retention of the intracellular folate pool Its sequence is moderately conserved between prokaryotes (gene folC) and eukaryotes. FPGS belongs to a protein family that contains a number of related peptidoglycan synthetases (Mur) 6.3.2. from EC (see ). A crystal structure of the MgATP complex of the enzyme from Lactobacillus casei reveals that folylpolyglutamate synthetase is a modular protein consisting of two domains, one with a typical mononucleotide-binding fold and the other strikingly similar to the folate-binding enzyme dihydrofolate reductase. The active site of the enzyme is located in a large interdomain cleft adjacent to an ATP-binding P-loop motif. Opposite this site, in the C domain, a cavity likely to be the folate binding site has been identified, and inspection of this cavity and the surrounding protein structure suggests that the glutamate tail of the substrate may project into the active site. A further feature of the structure is a well defined Omega loop, which contributes both to the active site and to interdomain interactions .; GO: 0004326 tetrahydrofolylpolyglutamate synthase activity, 0005524 ATP binding, 0009396 folic acid and derivative biosynthetic process.
Probab=100.00  E-value=7.6e-43  Score=297.44  Aligned_cols=336  Identities=24%  Similarity=0.301  Sum_probs=244.9

Q ss_pred             CCEEEEEEEECCCEEHHHHHHHH-HHCCCCCCCCCCCCC--------CCC-CCCCC-----------------CCCCC--
Q ss_conf             02245654306520001233333-210232222234544--------332-35544-----------------57675--
Q gi|254781102|r  115 ENILAVTGTSGKSSVASFVQQIC-QRSGLSSFQIGPTST--------ISS-FAQDN-----------------RLTTP--  165 (497)
Q Consensus       115 ~~vIgITGTnGKTTt~~~l~~iL-~~~g~~~~~~g~~~~--------~~~-~~~~~-----------------~~TtP--  165 (497)
T Consensus        21 ~~~IHVaGTNGKGST~a~l~~iL~~~~G~~VG~fTSPHl~~f~ERI~~nG~~i~d~~~~~~~~~~~~~~~~~~~~~~~~~  100 (460)
T TIGR01499        21 LPVIHVAGTNGKGSTCAFLESILREAAGYKVGLFTSPHLVSFNERIRVNGEPISDEELAQAFEQVRPILKKLSQETEYSQ  100 (460)
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEEEECCEECCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             97799972068758999999998875397788887373874223478988576889999999999998753310135877


Q ss_pred             ----CHHHHHHHHHHHCC-CCCCCCCCCCCHHHHHHHHHCCC---C-CCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHH
Q ss_conf             ----31221111111011-22333335667666555431043---2-121112321545543211-01122345542100
Q gi|254781102|r  166 ----SPIYLAKALSYLSS-QGVTHVSVEASSHGLDQHRLDGI---K-LIAGSFTNLGRDHIDYHQ-TQQAYFNAKMRLFE  235 (497)
Q Consensus       166 ----~~~~l~~~l~~~~~-~g~~~~vlEvSS~gl~~~rl~~i---~-~diaviTNI~~dHLd~~g-s~e~y~~aK~~If~  235 (497)
T Consensus       101 ~t~FE~~T~~-Af~~F~~~~~vd~av~EV---GlG-GrlDaTNv~~~p~~~~iT~ig~DH~~~LG~t~~~IA~eKAGI~k  175 (460)
T TIGR01499       101 PTFFELLTLL-AFLYFAQLAQVDVAVLEV---GLG-GRLDATNVVEKPLVSVITSIGLDHTEILGDTLEEIAWEKAGIIK  175 (460)
T ss_pred             CCHHHHHHHH-HHHHHHHHCCCCEEEEEE---CCC-CCCCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf             7789999999-999999850882899987---376-54455441138637997277768886505337999997457621


Q ss_pred             HCCCCCCCCCCCC-CCC-CHHHHHHHCCCCC-CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEE-EC--CCCCCCC
Q ss_conf             0000122321112-542-0001222102356-532222233332200000014544432112221001-01--2234332
Q gi|254781102|r  236 ELLPKESPAIIYA-DDA-YSKEVMKRAHNAG-CRVLSVGYQGKFIHLKKVCAIHNKQQVTISVEGKDF-DF--LFPLPGE  309 (497)
Q Consensus       236 ~~~~~~~~~ViN~-Dd~-~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~--~l~l~G~  309 (497)
T Consensus       176 ~g~----P~v~~~~~~~ea~~v~~~~A~~~~~~~l~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~G~  248 (460)
T TIGR01499       176 EGV----PIVTGEVQEPEALEVLKKKAEEKGAAPLQVVGKD---FDIKEKDENLNGEKFSFSGENLFLEPLLAKLSLLGD  248 (460)
T ss_pred             CCC----CEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCC---CCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCHH
T ss_conf             676----5687148866899999999997168604650341---322111122465212223555421001355565679


Q ss_pred             CCCCHHHHHHHHHHHCCC------CHHHHH-HHHHHHHHHHHHHCCCCCCC----CCCEEEECCCCCHHHHHHHHHHHH-
Q ss_conf             221105778887752026------767631-11234433455210001355----786023000378689999741211-
Q gi|254781102|r  310 FQVYNALVAAGLCIAIGI------DSALVL-EHLEKLHVVPGRFEFVGTNS----RGGRIYVDYAHTSNSLEMILKNIR-  377 (497)
Q Consensus       310 hni~NalaAia~a~~lGi------~~~~i~-~~L~~f~~~~gR~E~i~~~~----~~~~viiDyahNP~s~~~aL~~l~-  377 (497)
T Consensus       249 ~Q~~Na~~A~~~~~~l~~~~~~~~~~~~~~~~GL~~~~w-pGR~e~~~~~~~~~~~~p~~~lDGAHNp~~~~~l~~~~~~  327 (460)
T TIGR01499       249 HQAENAALALAALEVLGKQSSEKLSEAAIRSEGLASTIW-PGRLEILSEDKDAKAANPNILLDGAHNPHSAEALVEWLKE  327 (460)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC-CCCEEEEECCCCHHHCCCEEEEECCCCHHHHHHHHHHHHH
T ss_conf             999999999999998502356666766788898885111-2201133035412233871799527687899999999999


Q ss_pred             -HCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCE-----EEEC-CCCCCCCCHHHHHHHHHHCCCC-----EEEECCH
Q ss_conf             -00234440354026654600468999999861989-----9990-8879898989999999834798-----0997898
Q gi|254781102|r  378 -TITSGRIIVVFGCGGDRDQGKRPIMGKIALDLADI-----AIVT-DDNPRSEDPEKIRAEIIHGIPG-----FIEKGNR  445 (497)
Q Consensus       378 -~~~~~r~i~V~G~~Gdrd~~kr~~mg~~a~~~ad~-----vi~t-~d~~r~e~~~~I~~~i~~g~~~-----~~~~~dr  445 (497)
T Consensus       328 ~~~~~~~~~~~~~~l~~Kd~~---~~l~~L~~~~~~i~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (460)
T TIGR01499       328 KEFNGRPITLLFGALADKDAA---AMLALLRELVPKIFEEIVYVTPFDYPRALDAADLEAAAEAFGSEELEKAAETVSSW  404 (460)
T ss_pred             HHHCCCCCEEEEEECCCCCHH---HHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             862699718888611368878---99888787435652217686177862336757899999740541566778767308


Q ss_pred             HHHHHHH---------------------HH--HCCCCCEEEEEC
Q ss_conf             9999999---------------------99--658988999944
Q gi|254781102|r  446 IEAIRTA---------------------IE--MLNKQDVLVVAG  466 (497)
Q Consensus       446 ~eAi~~A---------------------~~--~a~~gDvili~G  466 (497)
T Consensus       405 ~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~lVtG  448 (460)
T TIGR01499       405 REALELAEKLDEAQKVSALIEIAYLLVALEKEKAKADDLILVTG  448 (460)
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEE
T ss_conf             99997166787655102457789888888750567677378872