HHsearch alignment for GI: 254781102 and conserved domain: pfam08245

Probab=100.00  E-value=1.3e-39  Score=276.51  Aligned_cols=185  Identities=31%  Similarity=0.505  Sum_probs=154.6

Q ss_pred             EEEEECCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             65430652000123333321023222223454433235544576753122111111101122333335667666555431
Q gi|254781102|r  120 VTGTSGKSSVASFVQQICQRSGLSSFQIGPTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVTHVSVEASSHGLDQHRL  199 (497)
Q Consensus       120 ITGTnGKTTt~~~l~~iL~~~g~~~~~~g~~~~~~~~~~~~~~TtP~~~~l~~~l~~~~~~g~~~~vlEvSS~gl~~~rl  199 (497)
T Consensus         1 VTGT~GKTTt~~ml~~iL~~~g~~~~~~g~~--------------~~~ig~~~~~~~~~~~~~~~~V~E~~~~~~~~~~l   66 (188)
T pfam08245         1 ITGTNGKTTTTELIAALLSAAGGVVGTGGNT--------------NNAIGLPLLLALMERKGADYAVLELSSFGLGEGRL   66 (188)
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCEEEECCC--------------CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
T ss_conf             9375868999999999998389989983884--------------74577999997666469968999832777107655


Q ss_pred             CCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC-CCC
Q ss_conf             043-212111232154554321101122345542100000012232111254200012221023565322222333-322
Q gi|254781102|r  200 DGI-KLIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNAGCRVLSVGYQG-KFI  277 (497)
Q Consensus       200 ~~i-~~diaviTNI~~dHLd~~gs~e~y~~aK~~If~~~~~~~~~~ViN~Dd~~~~~l~~~~~~~~~~~~~~g~~~-~~~  277 (497)
T Consensus        67 ~~~~~P~iaviTNi~~DHld~~~s~e~~~~~K~~i~~~-~~~~g~~v~n~Dd~~~~~~~~~---~~~~~~t~g~~~~~d~  142 (188)
T pfam08245        67 EGLAKPDIAVITNISPDHLDYHGTMENYAAAKAEIFEG-LPEDGIAVINADDPELAKRLKN---AGAKVITFGLENEADD  142 (188)
T ss_pred             CCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHC-CCCCCEEEEECCCHHHHHHHHH---CCCCEEEEECCCCCCE
T ss_conf             27778999999457655646621799999999999972-9999999998988889999986---6984699856876560


Q ss_pred             CCCEECCCCCCCCCCC-CCCCCEEECCCCCCCCCCCCHHHHHHHHH
Q ss_conf             0000001454443211-22210010122343322211057788877
Q gi|254781102|r  278 HLKKVCAIHNKQQVTI-SVEGKDFDFLFPLPGEFQVYNALVAAGLC  322 (497)
Q Consensus       278 ~~~~~~~~~~~~~~~i-~~~~~~~~~~l~l~G~hni~NalaAia~a  322 (497)
T Consensus       143 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~l~G~HNv~NalaAia~A  188 (188)
T pfam08245       143 RAANIYVSSEGGKIVLFTVPGGELEISLPLPGRHNVYNALAALAAA  188 (188)
T ss_pred             EEEEEEECCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHC
T ss_conf             4467899589968999962993899998866399999999999959