HHsearch results for GI: 254781102 and protein with PDBid: 2x5o_A

>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2jfg_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=100.00  E-value=0  Score=378.10  Aligned_cols=375  Identities=22%  Similarity=0.238  Sum_probs=256.6

Q ss_pred             EEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCC--CCCCCCCCCCCCEEEECCHHHHHHHHHHHHH
Q ss_conf             45302314689889980388767688899999859889998473223--3343223479709997998999999999982
Q gi|254781102|r   33 VSSDSRHIQAGWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYSL--QDFSATIRSNTPILVVDNTRKFLSLFASRLY  110 (497)
Q Consensus        33 i~~DSr~v~~g~lFval~G~~~dGh~fi~~A~~~GA~~~i~~~~~~~--~~~~~~~~~~~p~i~V~d~~~aL~~la~~~~  110 (497)
                      ..+|.|...+..-++...+....|+. -+ ..-+++.++|++...+.  +........++|++-  ..     +++..+ 
T Consensus        32 ~~~D~~~~~~~~~~l~~~~~~~~~~~-~~-~~~~~~d~vV~SpgI~~~~p~l~~a~~~~i~i~~--~~-----el~~~~-  101 (439)
T 2x5o_A           32 RVMDTRMTPPGLDKLPEAVERHTGSL-ND-EWLMAADLIVASPGIALAHPSLSAAADAGIEIVG--DI-----ELFCRE-  101 (439)
T ss_dssp             EEEESSSSCTTGGGSCTTSCEEESSC-CH-HHHHTCSEEEECTTSCTTCHHHHHHHHTTCEEEC--HH-----HHHHHH-
T ss_pred             EEEECCCCCCHHHHHHHCCCEEECCC-CH-HHCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEE--HH-----HHHHHH-
T ss_conf             99979899215899984898763687-97-7858998999899139999999999985992874--68-----888763-


Q ss_pred             CCCCCCEEEEEEEECCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             76200224565430652000123333321023222223454433235544576753122111111101122333335667
Q gi|254781102|r  111 GKHPENILAVTGTSGKSSVASFVQQICQRSGLSSFQIGPTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVTHVSVEAS  190 (497)
Q Consensus       111 ~~~~~~vIgITGTnGKTTt~~~l~~iL~~~g~~~~~~g~~~~~~~~~~~~~~TtP~~~~l~~~l~~~~~~g~~~~vlEvS  190 (497)
                        .+.++||||||||||||++|++++|+..|..+...|+.+...            .        .....+.+++++|+|
T Consensus       102 --~~~~~IaVTGT~GKTTTt~~l~~iL~~~~~~~~~~g~~g~~~------------~--------~~~~~~~~~~vve~~  159 (439)
T 2x5o_A          102 --AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPA------------L--------MLLDDECELYVLELS  159 (439)
T ss_dssp             --CCSCEEEEECSSSHHHHHHHHHHHHHHTTCCEEEEESSSBCH------------H--------HHCCTTCCEEEEECC
T ss_pred             --CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCC------------C--------CCCCCCCCEEEEECC
T ss_conf             --567689987899844799999999876386501135546730------------1--------033578878999900


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf             666555431043212111232154554321101-1223455421000000122321112542000122210235653222
Q gi|254781102|r  191 SHGLDQHRLDGIKLIAGSFTNLGRDHIDYHQTQ-QAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNAGCRVLS  269 (497)
Q Consensus       191 S~gl~~~rl~~i~~diaviTNI~~dHLd~~gs~-e~y~~aK~~If~~~~~~~~~~ViN~Dd~~~~~l~~~~~~~~~~~~~  269 (497)
                      |+.+.  +.....|+++|||||++||||+|+++ |+|+.+|.+|+..    .+..|+|.||+....+.    ....++++
T Consensus       160 ~~~~~--~~~~~~p~iavitNi~~dHld~~~~~~e~y~~~k~~i~~~----~~~~v~n~dd~~~~~~~----~~~~~~~~  229 (439)
T 2x5o_A          160 SFQLE--TTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYEN----AKVCVVNADDALTMPIR----GADERCVS  229 (439)
T ss_dssp             HHHHH--TCCCCCCSEEEECCCCSCCGGGCTTHHHHHHHHHHGGGTT----CSEEEEETTCGGGSCSC----CCSSCCEE
T ss_pred             CCCCC--CCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCC----CCEEEECCCHHHHHHHH----HCCCCEEE
T ss_conf             35534--5544476500102655410353111479999998653036----73366435148899987----43674467


Q ss_pred             CCCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             22333322000000145444321122210010122343322211057788877520267676311123443345521000
Q gi|254781102|r  270 VGYQGKFIHLKKVCAIHNKQQVTISVEGKDFDFLFPLPGEFQVYNALVAAGLCIAIGIDSALVLEHLEKLHVVPGRFEFV  349 (497)
Q Consensus       270 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~l~G~hni~NalaAia~a~~lGi~~~~i~~~L~~f~~~~gR~E~i  349 (497)
                      |+.+......   ........+.+........++++++|.||++|+++|++++..+|+++++|.++|++|++++||||.+
T Consensus       230 ~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~l~G~hn~~NalaAia~~~~lGi~~~~i~~~L~~f~gv~~R~e~~  306 (439)
T 2x5o_A          230 FGVNMGDYHL---NHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVV  306 (439)
T ss_dssp             ECSSSSSEEE---EEETTEEEEEETTEEEEEGGGCSCCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHCCCCTTSSEEE
T ss_pred             EECCCCCCCC---CCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEE
T ss_conf             5024443320---0036615998358512222211556605577787799999983996999999997577974426899


Q ss_pred             CCCCCCCEEEEC-CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCHHHH
Q ss_conf             135578602300-0378689999741211002344403540266546004689999998619899990887989898999
Q gi|254781102|r  350 GTNSRGGRIYVD-YAHTSNSLEMILKNIRTITSGRIIVVFGCGGDRDQGKRPIMGKIALDLADIAIVTDDNPRSEDPEKI  428 (497)
Q Consensus       350 ~~~~~~~~viiD-yahNP~s~~~aL~~l~~~~~~r~i~V~G~~Gdrd~~kr~~mg~~a~~~ad~vi~t~d~~r~e~~~~I  428 (497)
                      ... ++.++|+| |||||+|++++|++++....  +++++ .|.+|+...++ +++.+.+..+.+++.     +|+...|
T Consensus       307 ~~~-~g~~~idD~~a~np~a~~~al~~~~~~~~--~~~i~-~g~~~~~~~~~-l~~~~~~~~~~v~~~-----G~~~~~i  376 (439)
T 2x5o_A          307 LEH-NGVRWINDSKATNVGSTEAALNGLHVDGT--LHLLL-GGDGKSADFSP-LARYLNGDNVRLYCF-----GRDGAQL  376 (439)
T ss_dssp             EEE-TTEEEEECTTCCSHHHHHHHHTTCCCSSC--EEEEE-ESBCTTCCCGG-GGGGSCSSSEEEEEE-----STTHHHH
T ss_pred             EEE-CCEEEEEECCCCCHHHHHHHHHHHHHCCC--CEEEE-CCCCCCCCHHH-HHHHHHCCCCEEEEE-----CCCHHHH
T ss_conf             950-99899995379998999999996664488--66997-47886447899-999985048899998-----9898999


Q ss_pred             HHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             9999834798099789899999999965898899994
Q gi|254781102|r  429 RAEIIHGIPGFIEKGNRIEAIRTAIEMLNKQDVLVVA  465 (497)
Q Consensus       429 ~~~i~~g~~~~~~~~dr~eAi~~A~~~a~~gDvili~  465 (497)
                      ... .  -.....+.|++||++.|.++++|||+||+.
T Consensus       377 ~~~-~--~~~~~~~~~l~eav~~a~~~~~~gDvVLlS  410 (439)
T 2x5o_A          377 AAL-R--PEVAEQTETMEQAMRLLAPRVQPGDMVLLS  410 (439)
T ss_dssp             HTT-S--GGGEEECSSHHHHHHHHGGGCCTTCEEEEC
T ss_pred             HHH-C--CCCEEECCCHHHHHHHHHHHCCCCCEEEEC
T ss_conf             853-7--777177598999999999858992999979