BLAST/PSIBLAST alignment of GI: 254781102 and GI: 209550179 at iteration 1
>gi|209550179|ref|YP_002282096.1| UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 505
>gi|209535935|gb|ACI55870.1| UDP-N-acetylmuramyl-tripeptide synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 505
 Score =  448 bits (1153), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/471 (49%), Positives = 314/471 (66%), Gaps = 14/471 (2%)

Query: 1   MKLQDLIYKDFPELINQLSIFPMQWRERKINEVSSDSRHIQAGWIFVAIVGNKEDGHLFI 60
           MKL+DL    FPE+  QL   P    +  I+ +SSDSRH+  G  FVA+ G K DG  FI
Sbjct: 21  MKLRDLAGDQFPEIEAQLE-GPAGLLD--ISGLSSDSRHVAPGNAFVAVAGTKADGAGFI 77

Query: 61  PQAIAQGAEAIVVSSAYSLQDFSATIRSNTPILVVDNTRKFLSLFASRLYGKHPENILAV 120
             A  +GA   + S A         + ++ P+L V   R+FLS+ ASR +G+ PE ++AV
Sbjct: 78  ADAAGRGAAVAIASQA---------VETSIPVLAVKEPRRFLSIAASRFFGRQPETMVAV 128

Query: 121 TGTSGKSSVASFVQQICQRSGLSSFQIGPTSTISSFAQD-NRLTTPSPIYLAKALSYLSS 179
           TGT+GK+SVASF +QI   +G ++  IG T  +S    +   LTTP P+ L K L+ L+ 
Sbjct: 129 TGTAGKTSVASFTRQIWAHAGHAAAMIGTTGVVSPTRNEYGALTTPDPVSLHKLLAELAG 188

Query: 180 QGVTHVSVEASSHGLDQHRLDGIKLIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLP 239
           +GVTH ++EASSHGLDQ RLDG+KL A +FTNLGRDH+DYH T +AY  AKMRLF+ LLP
Sbjct: 189 EGVTHAAMEASSHGLDQSRLDGVKLAAAAFTNLGRDHMDYHPTVEAYMAAKMRLFQ-LLP 247

Query: 240 KESPAIIYADDAYSKEVMKRAHNAGCRVLSVGYQGKFIHLKKVCAIHNKQQVTISVEGKD 299
           K +PA+I+ADD +S + +K A +AG  V +VG +G ++ LK+V    +KQ   I ++G+ 
Sbjct: 248 KGAPAVIFADDPWSAQAIKAAADAGHDVRTVGRKGDYLTLKRVEHFRHKQTAEIHIDGEI 307

Query: 300 FDFLFPLPGEFQVYNALVAAGLCIAIGIDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIY 359
           F+   PL G+FQV NALVAAGL ++ G++  + +  LEKL    GR E VG    G   Y
Sbjct: 308 FEVDIPLAGDFQVANALVAAGLAMSTGVEPKVAMAALEKLVGASGRLELVGHTKDGALAY 367

Query: 360 VDYAHTSNSLEMILKNIRTITSGRIIVVFGCGGDRDQGKRPIMGKIALDLADIAIVTDDN 419
           VDYAH  ++LE +L ++R  T+GR++VVFGCGGDRD+GKRPIMG+IA  LAD+ IVTDDN
Sbjct: 368 VDYAHKPDALENVLGSVRPFTTGRVVVVFGCGGDRDRGKRPIMGEIACRLADVVIVTDDN 427

Query: 420 PRSEDPEKIRAEIIHGIPGFIEKGNRIEAIRTAIEMLNKQDVLVVAGKGHE 470
           PRSE+P  IRAEI+    G  E  +R +AIR A+ ML   D L+VAGKGHE
Sbjct: 428 PRSEEPAAIRAEIMAAASGASEIADRAKAIREAVGMLRSGDTLIVAGKGHE 478