RPSBLAST alignment for GI: 254781102 and conserved domain: PRK00141

>gnl|CDD|178896 PRK00141, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 473
 Score = 55.9 bits (135), Expect = 3e-08
 Identities = 96/439 (21%), Positives = 158/439 (35%), Gaps = 85/439 (19%)

Query: 43  GWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYS-LQDFSATI-----RSNTPILVVD 96
           G   V    N+   H  I      G   I  + A   L  FS  +     R ++P+LV  
Sbjct: 38  GCDVVVADDNETARHKLIEVT---GVADISTAEASDQLDSFSLVVTSPGWRPDSPLLVDA 94

Query: 97  NTRKF-------LSLFASR--LYGKHPENILAVTGTSGKSSVASFVQQICQRSGLSSFQI 147
            ++         L+    +  ++G+ P   LAVTGT+GK++  + +  + Q  G ++  +
Sbjct: 95  QSQGLEVIGDVELAWRLDQAGVFGE-PRTWLAVTGTNGKTTTTAMLAAMMQEGGFAAQAV 153

Query: 148 GPTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVTHVSVEASSHGLDQHRLDGIKLIAG 207
           G      S A    L     I +  A              E SS  L  H    +    G
Sbjct: 154 GNIGVPVSAA----LVAQPRIDVLVA--------------ELSSFQL--HWSPTLTPDVG 193

Query: 208 SFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNAGCRV 267
              NL  DHID+H + + Y   K ++      +   A+I ADD Y  ++   A  +G   
Sbjct: 194 VVLNLAEDHIDWHGSMRDYAADKAKVL-----RGPVAVIGADDEYVVQLTSAADLSGLIG 248

Query: 268 LSVGYQGKFIHLKKVCAIHNKQQVTI----SVEGKDFDFLFPLPGEFQVYNALVAAGLCI 323
            ++G             + + + V      +V     + + P  G   V +AL AA +  
Sbjct: 249 FTMGEPA-----AGQVGVRDGELVDNAFGQNVVLASAEGISP-AGPAGVLDALAAAAVAR 302

Query: 324 AIGIDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSN---------SLEMI-- 372
           + G+    +   L    V   R + V  +  GG  ++D +  +N           E +  
Sbjct: 303 SQGVAPEAIARALSSFEVAGHRGQVVAEH--GGVTWIDNSKATNPHAADAALAGHESVVW 360

Query: 373 -----LKN------IRTITSGRIIVVFGCGGDRDQGKRPIMGKIALDLADIAIVTDDN-- 419
                LK       IRT  + RI      G DR +    I+  +A    D  +   D+  
Sbjct: 361 VAGGQLKGADIDDLIRTH-APRIKAAVVLGVDRAE----IVAALAEHAPDAPVTVTDSTD 415

Query: 420 PRSEDPEKIRAEIIHGIPG 438
           P     E + A +    PG
Sbjct: 416 PEEAMEEAVSAAVSLAEPG 434