RPSBLAST alignment for GI: 254781102 and conserved domain: PRK00141
>gnl|CDD|178896 PRK00141, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 473
Score = 55.9 bits (135), Expect = 3e-08
Identities = 96/439 (21%), Positives = 158/439 (35%), Gaps = 85/439 (19%)
Query: 43 GWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYS-LQDFSATI-----RSNTPILVVD 96
G V N+ H I G I + A L FS + R ++P+LV
Sbjct: 38 GCDVVVADDNETARHKLIEVT---GVADISTAEASDQLDSFSLVVTSPGWRPDSPLLVDA 94
Query: 97 NTRKF-------LSLFASR--LYGKHPENILAVTGTSGKSSVASFVQQICQRSGLSSFQI 147
++ L+ + ++G+ P LAVTGT+GK++ + + + Q G ++ +
Sbjct: 95 QSQGLEVIGDVELAWRLDQAGVFGE-PRTWLAVTGTNGKTTTTAMLAAMMQEGGFAAQAV 153
Query: 148 GPTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVTHVSVEASSHGLDQHRLDGIKLIAG 207
G S A L I + A E SS L H + G
Sbjct: 154 GNIGVPVSAA----LVAQPRIDVLVA--------------ELSSFQL--HWSPTLTPDVG 193
Query: 208 SFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNAGCRV 267
NL DHID+H + + Y K ++ + A+I ADD Y ++ A +G
Sbjct: 194 VVLNLAEDHIDWHGSMRDYAADKAKVL-----RGPVAVIGADDEYVVQLTSAADLSGLIG 248
Query: 268 LSVGYQGKFIHLKKVCAIHNKQQVTI----SVEGKDFDFLFPLPGEFQVYNALVAAGLCI 323
++G + + + V +V + + P G V +AL AA +
Sbjct: 249 FTMGEPA-----AGQVGVRDGELVDNAFGQNVVLASAEGISP-AGPAGVLDALAAAAVAR 302
Query: 324 AIGIDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSN---------SLEMI-- 372
+ G+ + L V R + V + GG ++D + +N E +
Sbjct: 303 SQGVAPEAIARALSSFEVAGHRGQVVAEH--GGVTWIDNSKATNPHAADAALAGHESVVW 360
Query: 373 -----LKN------IRTITSGRIIVVFGCGGDRDQGKRPIMGKIALDLADIAIVTDDN-- 419
LK IRT + RI G DR + I+ +A D + D+
Sbjct: 361 VAGGQLKGADIDDLIRTH-APRIKAAVVLGVDRAE----IVAALAEHAPDAPVTVTDSTD 415
Query: 420 PRSEDPEKIRAEIIHGIPG 438
P E + A + PG
Sbjct: 416 PEEAMEEAVSAAVSLAEPG 434