RPSBLAST alignment for GI: 254781102 and conserved domain: PRK02006
>gnl|CDD|179359 PRK02006, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 498
Score = 58.5 bits (142), Expect = 3e-09
Identities = 71/296 (23%), Positives = 107/296 (36%), Gaps = 84/296 (28%)
Query: 102 LSLFASRLY-----GKHPENILAVTGTSGKSSVASFVQQICQRSGLSSFQIGPTSTISSF 156
+ LFA L G P+ +LA+TGT+GK++ + +C+R+G + IS
Sbjct: 104 IELFAQALAALGASGYAPK-VLAITGTNGKTTTTALTGLLCERAGKK---VAVAGNIS-- 157
Query: 157 AQDNRLTTPSPIYLAKALSYLSSQGVTHVSV-EASS------HGLDQHRLDGIKLIAGSF 209
P L K + + + + V V E SS H L A +
Sbjct: 158 ----------PAALDKLMEAIDAGALPDVWVLELSSFQLETTHTLAPD--------AATV 199
Query: 210 TNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAH-NAGCRVL 268
N+ +DH+D+H + AY AK R+F + ++ DDA VM A +
Sbjct: 200 LNITQDHLDWHGSMAAYAAAKARIF----GPRTVRVLNRDDA---RVMAMAPPGGAADAV 252
Query: 269 SVG-----YQGKFIHLKKVCAIHNKQQVTISVEGKDFDFLFPLP---------------- 307
+ G G + + + VE +D D P P
Sbjct: 253 TFGLDEPAADGDY-------GLLRDNGMAWLVEAEDRDAADPAPSRRRKKDAAPPPDIRL 305
Query: 308 ------------GEFQVYNALVAAGLCIAIGIDSALVLEHLEKLHVVPGRFEFVGT 351
G NAL A L AIG+ +A +L L + P R E V T
Sbjct: 306 KRLMPADALRIRGLHNAANALAALALARAIGLPAAPLLHGLREYRGEPHRVELVAT 361