RPSBLAST alignment for GI: 254781102 and conserved domain: PRK11929
>gnl|CDD|183385 PRK11929, PRK11929, putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase; Provisional. Length = 958
Score = 387 bits (995), Expect = e-108
Identities = 183/476 (38%), Positives = 256/476 (53%), Gaps = 24/476 (5%)
Query: 23 MQWRERKINEVSSDSRHIQAGWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYSLQDF 82
++ ++ DSR +Q G +FVA G DG FI QA+A+GA A++V + Q
Sbjct: 22 LRGCVAATADLRLDSREVQPGDLFVACRGAASDGRAFIDQALARGAAAVLVEAEGEDQVA 81
Query: 83 SATIRSNTPILVVDNTRKFLSLFASRLYGKHPE--NILAVTGTSGKSSVASFVQQICQRS 140
+A +L V + RK L A+R YG+ E +++AVTGT+GK+S A + Q+ R
Sbjct: 82 AADAL----VLPVADLRKALGELAARWYGRPSEQLSLVAVTGTNGKTSCAQLLAQLLTRL 137
Query: 141 GLSSFQIGPTST-ISSFAQDNRLTTPSPIYLAKALSYLSSQGVTHVSVEASSHGLDQHRL 199
G IG + LTTP I L + L+ + + G V++EASSHGL+Q RL
Sbjct: 138 GKPCGSIGTLGARLDGRLIPGSLTTPDAIILHRILARMRAAGADAVAMEASSHGLEQGRL 197
Query: 200 DGIKLIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKR 259
DG+++ FTNL RDH+DYH T Q Y AK LF +L P A+I ADD + R
Sbjct: 198 DGLRIAVAGFTNLTRDHLDYHGTMQDYEEAKAALFSKL-PGLGAAVINADDPAAA----R 252
Query: 260 AHNAGCRVLSVGYQ----GKFIHLKKVCAIHNKQQVTISVEGKDFDFLFPLPGEFQVYNA 315
A R L VGY G + + + A + Q T++ + + L G F V N
Sbjct: 253 LLAALPRGLKVGYSPQNAGADVQARDLRATAHGQVFTLATPDGSYQLVTRLLGRFNVSNL 312
Query: 316 LVAAGLCIAIGIDSALVLEHLEKLHVVPGRFEFVG--TNSRGGRIYVDYAHTSNSLEMIL 373
L+ A +G+ A + L + VPGR E VG ++G + VDYAHT ++L L
Sbjct: 313 LLVAAALKKLGLPLAQIARALAAVSPVPGRMERVGPTAGAQGPLVVVDYAHTPDALAKAL 372
Query: 374 KNIRTIT---SGRIIVVFGCGGDRDQGKRPIMGKIALDLADIAIVTDDNPRSEDPEKIRA 430
+R + +GR++ VFGCGGDRD+GKRP MG+IA +LAD +VT DNPRSE PE I
Sbjct: 373 TALRPVAQARNGRLVCVFGCGGDRDKGKRPEMGRIAAELADRVVVTSDNPRSEAPEAIID 432
Query: 431 EIIHGIPG---FIEKGNRIEAIRTAIEMLNKQDVLVVAGKGHETVHIVTNGEKKMS 483
+I+ GIP +R EAIR AI M DV+++AGKGHET + +
Sbjct: 433 QILAGIPAGARVFVISDRAEAIRQAIWMAAPGDVILIAGKGHETYQEIGGRKLFFD 488