RPSBLAST alignment for GI: 254781102 and conserved domain: PRK11929
>gnl|CDD|183385 PRK11929, PRK11929, putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase; Provisional. Length = 958
Score = 107 bits (270), Expect = 6e-24
Identities = 91/373 (24%), Positives = 154/373 (41%), Gaps = 37/373 (9%)
Query: 28 RKINEVSSDSRHIQAGWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYSLQDFSATIR 87
VS+DSR + G +FVA+ G DGH ++PQA A GA A VV + D
Sbjct: 524 PHAGAVSTDSRSVGRGELFVALRGENFDGHDYLPQAFAAGACAAVVERQVADVDL----- 578
Query: 88 SNTPILVVDNTRKFLSLFASRLYGKHPENILAVTGTSGKSSVASFVQQICQRSGLSSFQI 147
P +VVD+TR L A+ + ++A+TG++GK++ + I L+++Q
Sbjct: 579 ---PQIVVDDTRAALGRLATAWRARFSLPVVAITGSNGKTTTKEMIAAI-----LAAWQG 630
Query: 148 GPTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVTHVSV-EASSHGLDQ-HRLDGI-KL 204
+ +N + P L+ L + +V E + + L I
Sbjct: 631 EDRVLATEGNFNNEIGVP--------LTLLRLRAQHRAAVFELGMNHPGEIAYLAAIAAP 682
Query: 205 IAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNAG 264
TN R+H ++ + +A AK + LP++ A++ DD Y+ K A
Sbjct: 683 TVALVTNAQREHQEFMHSVEAVARAKGEIIAA-LPEDGVAVVNGDDPYTAIWAKLA--GA 739
Query: 265 CRVLSVGYQ-GKFIHLKKVCAIHNKQQVT-----ISVEGKDFDFLFPLPGEFQVYNALVA 318
RVL G Q G ++ +K+ + + + + PL GE + NAL A
Sbjct: 740 RRVLRFGLQPGADVYAEKIAKDISVGEAGGTRCQVVTPAGSAEVYLPLIGEHNLRNALAA 799
Query: 319 AGLCIAIGIDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSNSLEM--ILKNI 376
+A G + LE+ V GR + + G +D + +N M + +
Sbjct: 800 IACALAAGASLKQIRAGLERFQPVAGRMQRRRLS--CGTRIIDDTYNANPDSMRAAIDVL 857
Query: 377 RTITSGRIIVVFG 389
+ +G +V G
Sbjct: 858 AELPNGPRALVLG 870