RPSBLAST alignment of GI: 254781102 and protein with PDBid: 1e8c

>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.0A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1 Length = 498
 Score =  351 bits (902), Expect = 2e-97
 Identities = 165/480 (34%), Positives = 246/480 (51%), Gaps = 14/480 (2%)

Query: 27  ERKINEVSSDSRHIQAGWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYSLQDFSATI 86
            R + E++ DSR   AG +FVA+VG++ DG  +IPQAIAQG  AI+  +     D     
Sbjct: 18  SRALREMTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGVAAIIAEAKDEATDGEIRE 77

Query: 87  RSNTPILVVDNTRKFLSLFASRLYGKHPENI--LAVTGTSGKSSVASFVQQICQRSGLSS 144
               P++ +    + LS  A R Y +  +N+  + VTGT+GK++    + Q  Q  G  S
Sbjct: 78  MHGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGEIS 137

Query: 145 FQIG-PTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVTHVSVEASSHGLDQHRLDGIK 203
             +G   + +         TT S + +   L+ L  QG T  ++E SSHGL QHR+  +K
Sbjct: 138 AVMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALK 197

Query: 204 LIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNA 263
             A  FTNL RDH+DYH   + Y  AK  L+         AII ADD   +  + +  +A
Sbjct: 198 FAASVFTNLSRDHLDYHGDMEHYEAAKWLLYS--EHHCGQAIINADDEVGRRWLAKLPDA 255

Query: 264 ----GCRVLSVGYQGKFIHLKKVCAIHNKQQVTISVEGKDFDFLFPLPGEFQVYNALVAA 319
                   ++    G+++   +V    +   +  S    D +    L G F V N L+A 
Sbjct: 256 VAVSMEDHINPNCHGRWLKATEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLAL 315

Query: 320 GLCIAIGIDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSNSLEMILKNIRTI 379
              +A+G   A +L+   +L  V GR E          + VDYAHT ++LE  L+  R  
Sbjct: 316 ATLLALGYPLADLLKTAARLQPVCGRMEVFTAP-GKPTVVVDYAHTPDALEKALQAARLH 374

Query: 380 TSGRIIVVFGCGGDRDQGKRPIMGKIALDLADIAIVTDDNPRSEDPEKIRAEIIHGIPGF 439
            +G++  VFGCGGDRD+GKRP+MG IA + AD+A+VTDDNPR+E+P  I  +I+ G+   
Sbjct: 375 CAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDA 434

Query: 440 IEK---GNRIEAIRTAIEMLNKQDVLVVAGKGHETVHIVTNGEKKMSVDCDIIREILGLI 496
                   R EA+  A+    + DV++VAGKGHE   IV   ++    D   +  +LG+I
Sbjct: 435 GHAKVMEGRAEAVTCAVMQAKENDVVLVAGKGHEDYQIV-GNQRLDYSDRVTVARLLGVI 493