RPSBLAST alignment of GI: 254781102 and protein with PDBid: 1e8c
>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.0A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1 Length = 498
Score = 351 bits (902), Expect = 2e-97
Identities = 165/480 (34%), Positives = 246/480 (51%), Gaps = 14/480 (2%)
Query: 27 ERKINEVSSDSRHIQAGWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYSLQDFSATI 86
R + E++ DSR AG +FVA+VG++ DG +IPQAIAQG AI+ + D
Sbjct: 18 SRALREMTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGVAAIIAEAKDEATDGEIRE 77
Query: 87 RSNTPILVVDNTRKFLSLFASRLYGKHPENI--LAVTGTSGKSSVASFVQQICQRSGLSS 144
P++ + + LS A R Y + +N+ + VTGT+GK++ + Q Q G S
Sbjct: 78 MHGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGEIS 137
Query: 145 FQIG-PTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVTHVSVEASSHGLDQHRLDGIK 203
+G + + TT S + + L+ L QG T ++E SSHGL QHR+ +K
Sbjct: 138 AVMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALK 197
Query: 204 LIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNA 263
A FTNL RDH+DYH + Y AK L+ AII ADD + + + +A
Sbjct: 198 FAASVFTNLSRDHLDYHGDMEHYEAAKWLLYS--EHHCGQAIINADDEVGRRWLAKLPDA 255
Query: 264 ----GCRVLSVGYQGKFIHLKKVCAIHNKQQVTISVEGKDFDFLFPLPGEFQVYNALVAA 319
++ G+++ +V + + S D + L G F V N L+A
Sbjct: 256 VAVSMEDHINPNCHGRWLKATEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLAL 315
Query: 320 GLCIAIGIDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSNSLEMILKNIRTI 379
+A+G A +L+ +L V GR E + VDYAHT ++LE L+ R
Sbjct: 316 ATLLALGYPLADLLKTAARLQPVCGRMEVFTAP-GKPTVVVDYAHTPDALEKALQAARLH 374
Query: 380 TSGRIIVVFGCGGDRDQGKRPIMGKIALDLADIAIVTDDNPRSEDPEKIRAEIIHGIPGF 439
+G++ VFGCGGDRD+GKRP+MG IA + AD+A+VTDDNPR+E+P I +I+ G+
Sbjct: 375 CAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDA 434
Query: 440 IEK---GNRIEAIRTAIEMLNKQDVLVVAGKGHETVHIVTNGEKKMSVDCDIIREILGLI 496
R EA+ A+ + DV++VAGKGHE IV ++ D + +LG+I
Sbjct: 435 GHAKVMEGRAEAVTCAVMQAKENDVVLVAGKGHEDYQIV-GNQRLDYSDRVTVARLLGVI 493