RPSBLAST alignment of GI: 254781102 and protein with PDBid: 1gg4

>1gg4_A UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase...; alpha/beta sheet; 2.30A {Escherichia coli} SCOP: c.98.1.1 c.59.1.1 c.72.2.1 Length = 452

 Score =  209 bits (531), Expect = 2e-54
 Identities = 87/446 (19%), Positives = 157/446 (35%), Gaps = 35/446 (7%)

Query: 27  ERKINEVSSDSRHIQAGWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYSLQDFSATI 86
           +  ++ V++D+R +  G +FVA+ G + D H F  QA A GA A++VS           +
Sbjct: 21  DITLDAVTTDTRKLTPGCLFVALKGERFDAHDFADQAKAGGAGALLVSRP---------L 71

Query: 87  RSNTPILVVDNTRKFLSLFASRLYGKHPENILAVTGTSGKSSVASFVQQICQRSGLSSFQ 146
             + P L+V +TR      A+ +  + P  ++A+TG+SGK+SV      I  + G + + 
Sbjct: 72  DIDLPQLIVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYT 131

Query: 147 IGPTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVTHVSVEASSHGLDQHRLDGIKLIA 206
            G                         L          + + A+  G     +   +  A
Sbjct: 132 AGN-------------LNNDIGVPMTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEA 178

Query: 207 GSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNAGCR 266
               NL   H++   +      AK  +F   LP+   AI+ AD+           +    
Sbjct: 179 ALVNNLAAAHLEGFGSLAGVAKAKGEIFSG-LPENGIAIMNADNNDWLNWQSVIGSRKVW 237

Query: 267 VLSVGYQGKFIHLKKVCAIHNKQQVTISVEGKDFDFLFPLPGEFQVYNALVAAGLCIAIG 326
             S            +    +  + T+       D L PLPG   + NAL AA L +++G
Sbjct: 238 RFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLPLPGRHNIANALAAAALSMSVG 297

Query: 327 IDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVDYAHTSNSLEMILKNIRTITSGR--I 384
                +   L  L  VPGR   +        +   Y     S+   ++ +  +   R  +
Sbjct: 298 ATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAEMPGYRVLV 357

Query: 385 IVVFGCGGDRDQGKRPIMGKIALDLA-DIAIVTDDNPRSEDPEKIRAEIIHGIPGFIEKG 443
           +      G   +     +G+ A     D  +       +        E            
Sbjct: 358 VGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGKQSHAISTASGVGEHFA--------- 408

Query: 444 NRIEAIRTAIEMLNKQDVLVVAGKGH 469
           ++   I     ++ +Q V+ +  KG 
Sbjct: 409 DKTALITRLKLLIAEQQVITILVKGS 434