RPSBLAST alignment of GI: 254781102 and protein with PDBid: 1p3d

>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A* Length = 475
 Score =  137 bits (346), Expect = 5e-33
 Identities = 78/418 (18%), Positives = 140/418 (33%), Gaps = 48/418 (11%)

Query: 66  QGAEAIVVSSAYSLQDFSATIRSNTPILV--VDNTRKFLSLFASRLYGKHPENILAVTGT 123
           +GA  +VVSSA         I+ + P LV         +             + +AV GT
Sbjct: 76  EGASVVVVSSA---------IKDDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGT 126

Query: 124 SGKSSVASFVQQICQRSGLSSFQIGPTSTISSFAQDNRLTTPSPIYLAKALSYLSSQGVT 183
            GK++  + +  I  ++ L    +     + S  ++  L                     
Sbjct: 127 HGKTTTTAMISMIYTQAKLDPTFVN-GGLVKSAGKNAHLGASR----------------- 168

Query: 184 HVSVEASSHGLDQHRLDGIKLIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESP 243
           ++  EA         L   + +    TN+  DH+D ++       A    F   LP    
Sbjct: 169 YLIAEADESDASFLHL---QPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGL 225

Query: 244 AIIYADDAYSKEVMKRAHNAGCRVLSVGYQGKFIHLKKVCAIHNKQ--QVTISVEGKDFD 301
           A++ ADD     +M+     G +V++ G+  +  +  +       Q     I    +  +
Sbjct: 226 AVMCADDPV---LMELVPKVGRQVITYGFSEQADYRIEDYEQTGFQGHYTVICPNNERIN 282

Query: 302 FLFPLPGEFQVYNALVAAGLCIAIGIDSALVLEHLEKLHVVPGRFEFVGTNSRGG---RI 358
            L  +PG+    NA  A  +    GI +  +LE L        RF+ +G   R     R+
Sbjct: 283 VLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRL 342

Query: 359 YVDYAHTSNSLEMILKNIRTITSG-RIIVVFGCGGDRDQGKRPIMGKIALDLADIAIVTD 417
             DY H    + + +K  R      RI+++F                  L   D  I+ D
Sbjct: 343 VDDYGHHPTEVGVTIKAAREGWGDKRIVMIFQPHRYSRTRDLFDDFVQVLSQVDALIMLD 402

Query: 418 DNPRSEDPEKI--RAEIIHGIPGF-----IEKGNRIEAIRTAIEMLNKQDVLVVAGKG 468
                E P        +   I        I   +  +      +++   D+++  G G
Sbjct: 403 VYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDGDLILAQGAG 460