HHsearch alignment for GI: 254781103 and conserved domain: COG2367
>COG2367 PenP Beta-lactamase class A [Defense mechanisms].
Probab=97.81 E-value=5.8e-05 Score=50.34 Aligned_cols=253 Identities=20% Similarity=0.224 Sum_probs=133.2
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---CCCEECCCCCCC
Q ss_conf 32343111223023203211121001473111344432322222332456643201235654430---240320442133
Q gi|254781103|r 279 YNAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGID---SGLFTVKDLFDT 355 (598)
Q Consensus 279 ~~a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaLe---~g~i~~~~~~~~ 355 (598)
T Consensus 60 ~~~~~~~~~v~d~~t~~~~~------~n----------------~~~~fp~aSt~K~~v~~a~l~~v~~G~~~l~e~~ti 117 (329)
T COG2367 60 ATDGRVGVYVLDVDTGELIA------IN----------------GDERFPAASTIKLPVLAALLEQVDAGRIGLDERLTI 117 (329)
T ss_pred CCCCEEEEEEEECCCCCEEE------EC----------------CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 57852679999668873131------15----------------775212578999999999999714575575542010
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHH----HHHCCCCCEEEEEEECCCCC-CCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6763222101123454323003999----85503671235432023333-200110122257634468654211112233
Q gi|254781103|r 356 RNPIKVGKHVIHDYHPQNRILTIPE----IFRYSSNIGAAQIADAMGIQ-GHKEFLYRLGLLSKLETELPEIQAPSYPSQ 430 (598)
Q Consensus 356 ~~~~~~~~~~i~~~~~~~g~it~~~----al~~S~Nv~~~~i~~~lg~~-~~~~~~~~fG~g~~t~idlp~e~~g~~p~~ 430 (598)
T Consensus 118 ~~d~~~~~s~~~~~~~~g~~~t~~el~~~mi~~SDNtAtnmLi~rlg~~~~v~~~l~~~Gl~~-t~~~~~~~~~l-n~~~ 195 (329)
T COG2367 118 TKDDRVGGSGVLQYLVGGGGSTLRELLTKMITASDNTATNMLIERLGGPKALNEWLRSIGLPN-TRLRRPYMPDL-NRFN 195 (329)
T ss_pred CHHHHCCCCCHHEEECCCCCEEHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCC-CCCHHHCCCCC-CCCC
T ss_conf 433322576111131578835799999652221402888999999358199999999818832-23100026620-0266
Q ss_pred CCCCCCEECCCCCCCEEEHHHCC-CCCCHHHHCCEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 55441001146875213001002-21100110782301089998630788503201899999999999998733884641
Q gi|254781103|r 431 WKRIHSLTISFGHGLSTTPLQTA-VAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKNTVKTMRSLLREGVTGGSGRR 509 (598)
Q Consensus 431 ~~~~~~~~~~~Gqg~~~TPlqla-~~~atiAN~G~~~~P~lv~~~~~~~~~~~~~vis~~~a~~l~~~l~~vv~~GTg~~ 509 (598)
T Consensus 196 ~-~~d----~~~~~~~~t~a~~~~~L~q~i~~~-~~~~~----------~~~--~~~~~~~~~~--~~~~~~~g~~~~~r 255 (329)
T COG2367 196 G-PYD----PRDSGKTTTPADDAATLLQLILGA-VLSPS----------DRA--TGLSGYLAEW--ALLANTIGRDWLLR 255 (329)
T ss_pred C-CCC----CCCCCCCCCHHHHHHHHHHHHHCC-CCCCC----------CCC--CCCHHHHHHH--HHHHHCCCCCCCHH
T ss_conf 7-766----333556568789999999987335-57854----------223--4405888878--99862668643201
Q ss_pred CC-CCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEEECCCCE-EEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 04-7973576672403512688766886217999997428880-999999807888888874321467899999999999
Q gi|254781103|r 510 AF-VPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQ-YIVLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSA 587 (598)
Q Consensus 510 a~-~~g~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~~dP~-~~v~V~v~~p~~~~~~~~~Gg~~AaPi~~~I~~~~~ 587 (598)
T Consensus 256 ~~~~~~~~ia~K~G~~l~-------~~~~D---~~~~~~~~~~~~v~~~~~~~~~~~~d----~~~~~~~~~~~~~~~~~ 321 (329)
T COG2367 256 AGLPFDWAIAHKTGTGLG-------GTAND---VGIIWAPVPKPIVAAVIGERPGKKAD----ATAVYTALPAELAREVA 321 (329)
T ss_pred CCCCCCHHHHCCCCCCCC-------CCCCC---EEEEECCCCCEEEEEEEECCCCCCCC----CCCCCCHHHHHHHHHHH
T ss_conf 038744223046563467-------88776---37885698844899997347676777----54100104899999985
Q ss_pred HH
Q ss_conf 98
Q gi|254781103|r 588 SM 589 (598)
Q Consensus 588 ~~ 589 (598)
T Consensus 322 ~~ 323 (329)
T COG2367 322 GL 323 (329)
T ss_pred HC
T ss_conf 02