HHsearch alignment for GI: 254781103 and conserved domain: PRK09506
>PRK09506 mrcB penicillin-binding protein 1b; Reviewed.
Probab=100.00 E-value=0 Score=421.18 Aligned_cols=302 Identities=17% Similarity=0.213 Sum_probs=250.0
Q ss_pred CCCCCEEEEHHHHHHHHHHHHHHHCCCCC------CCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88674255525767777764421001132------343111223023203211121001473111344432322222332
Q gi|254781103|r 252 NLQPIRLALDLRIQNIVHQELVENKKKYN------AESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYG 325 (598)
Q Consensus 252 ~g~dI~lTID~~lQ~~~e~~l~~~~~~~~------a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~ 325 (598)
T Consensus 432 ~GLkI~TTLDp~~Q~~AE~av~~~l~~l~~~~~~~~lq~A~VviD~~TG~V~AmVGG~d~~---------~sgfNRA~~A 502 (839)
T PRK09506 432 SGVKIFTTFDSVAQDAAEKAVVEGIPALKKQRKLSDLETAMVVVDRFSGEVRAMVGGSEPQ---------FAGYNRAMQA 502 (839)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCC---------CCCCEEEEEC
T ss_conf 7706996389999999999999867887642277664057999978998599997488877---------6676134546
Q ss_pred CCCCCCCCHHHHHHHHHHC-CCEECCCCCCCCCCCCC---CC--CCCCCCCCC-CCCCCHHHHHHCCCCCEEEEEEECCC
Q ss_conf 4566432012356544302-40320442133676322---21--011234543-23003999855036712354320233
Q gi|254781103|r 326 IFEMGSIFKVFTIAMGIDS-GLFTVKDLFDTRNPIKV---GK--HVIHDYHPQ-NRILTIPEIFRYSSNIGAAQIADAMG 398 (598)
Q Consensus 326 ~yePGStfKp~t~aaaLe~-g~i~~~~~~~~~~~~~~---~~--~~i~~~~~~-~g~it~~~al~~S~Nv~~~~i~~~lg 398 (598)
T Consensus 503 ~RQ~GSt~KPfvY~aAL~~~~~~~~~T~l~D~-Pi~~~~~~G~~W~P~Nyd~~~~G~VtLr~ALa~S~N~paVrL~~~vG 581 (839)
T PRK09506 503 RRSIGSLAKPATYLTALSQPDKYRLNTWIADA-PISLRQPNGQVWSPQNDDRRYSGRVMLVDALTRSMNVPTVNLGMALG 581 (839)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCEECCC-CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHC
T ss_conf 77997651189999998667997776452453-54864689874388648998657121999998583899999999879
Q ss_pred CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCC
Q ss_conf 33200110122257634468654211112233554410011468752130010022110011078230108999863078
Q gi|254781103|r 399 IQGHKEFLYRLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREES 478 (598)
Q Consensus 399 ~~~~~~~~~~fG~g~~t~idlp~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~ 478 (598)
T Consensus 582 l~~v~~~~~~lGi~~~~---~~--------------~~pSlaLG-a~evSplemA~AYatfAN~G~~~~p~~I~~V~d~~ 643 (839)
T PRK09506 582 LPAVTDTWIKLGVPKDQ---LN--------------PVPAMLLG-ALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAED 643 (839)
T ss_pred HHHHHHHHHHCCCCCCC---CC--------------CCCCEEEC-CCCCCHHHHHHHHHHHHCCCEECCCEEEEEEECCC
T ss_conf 89999999986998666---88--------------88673107-78888999999999997598773888999999899
Q ss_pred CCC-------CCCCCCHHHHHHHHHHHHHHHCCCCEEEC--CCCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEEECCC
Q ss_conf 850-------32018999999999999987338846410--479735766724035126887668862179999974288
Q gi|254781103|r 479 EKV-------SRIVLKKNTVKTMRSLLREGVTGGSGRRA--FVPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTD 549 (598)
Q Consensus 479 ~~~-------~~~vis~~~a~~l~~~l~~vv~~GTg~~a--~~~g~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~~d 549 (598)
T Consensus 644 G~vl~~~~p~~~rvis~~~A~l~~~~L~~Vv~~GTgr~l~~~~p~~~vAGKTGTT---------nd~rDaWFvG~T~--- 711 (839)
T PRK09506 644 GKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTT---------NNNVDTWFAGIDG--- 711 (839)
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEECCCC---------CCCEEEEEEEECC---
T ss_conf 9988306998650379999999999999986525524466248998514788887---------9982169985369---
Q ss_pred CEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH--HHCCCCCC
Q ss_conf 80999999807888888874321467899999999999--98189985
Q gi|254781103|r 550 PQYIVLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSA--SMLGVKPV 595 (598)
Q Consensus 550 P~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~~~I~~~~~--~~~~i~P~ 595 (598)
T Consensus 712 -~~v~~VWvG~DdN~p-~~ltG~sgAl~iw~~~m~~~~~~~l~~~~p~ 757 (839)
T PRK09506 712 -SEVTITWVGRDNNQP-TKLYGASGAMTIYQRYLANQTPTPLNLTPPE 757 (839)
T ss_pred -CEEEEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf -959999982568998-7886413279999999973699776678999