HHsearch alignment for GI: 254781103 and conserved domain: PRK11113
>PRK11113 D-alanyl-D-alanine carboxypeptidase/endopeptidase; Provisional.
Probab=94.63 E-value=0.018 Score=34.48 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=23.6
Q ss_pred EEEEECCEEEECCCCCCCCCCCEEEEEEEEECCCCE-EEEEEEEEC
Q ss_conf 576672403512688766886217999997428880-999999807
Q gi|254781103|r 516 EVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQ-YIVLSFMDS 560 (598)
Q Consensus 516 ~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~~dP~-~~v~V~v~~ 560 (598)
T Consensus 413 ~v~aKTGTL~-----------gV~sLAGYv~~~~G~~l~Fsi~vNn 447 (477)
T PRK11113 413 KVSAKTGSLQ-----------GVYNLAGFITTASGQRMAFVQFLSG 447 (477)
T ss_pred EEEEEEECCC-----------CCEEEEEEEECCCCCEEEEEEEECC
T ss_conf 6999874356-----------8357179999899599999999789