HHsearch alignment for GI: 254781103 and conserved domain: PRK11240
>PRK11240 penicillin-binding protein 1C; Provisional.
Probab=100.00 E-value=0 Score=384.19 Aligned_cols=296 Identities=18% Similarity=0.214 Sum_probs=241.4
Q ss_pred CCCCEEEEHHHHHHHHHHHHHHHCCCCCC-CCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86742555257677777644210011323-43111223023203211121001473111344432322222332456643
Q gi|254781103|r 253 LQPIRLALDLRIQNIVHQELVENKKKYNA-ESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGS 331 (598)
Q Consensus 253 g~dI~lTID~~lQ~~~e~~l~~~~~~~~a-~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGS 331 (598)
T Consensus 269 ~~~I~TTlD~~lQ~~~e~~~~~~~~~l~~~~~~A~vviD~~tg~V~A~VG~~d~~~~~~-----~g~-vd~~~A~RqPGS 342 (770)
T PRK11240 269 SDKIVTTLDAGLQRRLEDLAQNWKGRLPERSSLAMIVVDHTDMAVRGWVGSVDLNDDSR-----FGH-VDMVNAIRSPGS 342 (770)
T ss_pred CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCC-----CCC-CCCCCCCCCCCC
T ss_conf 97499575999999999999877751687556359999789980899983766675444-----676-330203568962
Q ss_pred CCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCC
Q ss_conf 20123565443024032044213367632221011234543-23003999855036712354320233332001101222
Q gi|254781103|r 332 IFKVFTIAMGIDSGLFTVKDLFDTRNPIKVGKHVIHDYHPQ-NRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRLG 410 (598)
Q Consensus 332 tfKp~t~aaaLe~g~i~~~~~~~~~~~~~~~~~~i~~~~~~-~g~it~~~al~~S~Nv~~~~i~~~lg~~~~~~~~~~fG 410 (598)
T Consensus 343 tlKPfvYa~Ale~G~i~p~s~l~D-~P~~~g~y~P~Nfd~~~~G~vt~r~AL~~SlNipAV~ll~~~G~~~~~~~l~~~G 421 (770)
T PRK11240 343 VLKPFVYGLALDDGLIHPASLLQD-VPRRTGDYRPGNFDSGFHGPVSMSEALVRSLNLPAVQVLEAYGPKRFAAKLRNVG 421 (770)
T ss_pred HHHHHHHHHHHHCCCCCCCCEECC-CCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCC
T ss_conf 388999999997699998878416-8701488687027887206110999998654799999999879699999999739
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCCCCCCCCHHH
Q ss_conf 57634468654211112233554410011468752130010022110011078230108999863078850320189999
Q gi|254781103|r 411 LLSKLETELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKNT 490 (598)
Q Consensus 411 ~g~~t~idlp~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~~~~vis~~~ 490 (598)
T Consensus 422 i~~~----l~~~~~---~-------~LslaLG-g~evtl~eLa~aYa~~An~G~~~~~~~~~----~~~~~~~~v~s~~a 482 (770)
T PRK11240 422 LPLY----LPAGAA---P-------NLSLILG-GAGARLEDMAAAYSAFARHGKAAKLRLQP----DDPLLERPLMSPGA 482 (770)
T ss_pred CCCC----CCCCCC---C-------CCCEECC-CCCCCHHHHHHHHHHHHCCCEECCCEECC----CCCCCCCCCCCHHH
T ss_conf 9756----787778---9-------8533315-76888999999999997798433517715----88633213688888
Q ss_pred HHHHHHHHHHHHCCCCEEECCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCC
Q ss_conf 99999999987338846410479735766724035126887668862179999974288809999998078888888743
Q gi|254781103|r 491 VKTMRSLLREGVTGGSGRRAFVPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKIKERNQLT 570 (598)
Q Consensus 491 a~~l~~~l~~vv~~GTg~~a~~~g~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~~dP~~~v~V~v~~p~~~~~~~~~ 570 (598)
T Consensus 483 a~~~~~iL~~~~r~~~~~~-l~~~~pvAgKTGTS~---------g~RDaWfvG~tp----~ytvgVWvGn~Dg~p~~~~~ 548 (770)
T PRK11240 483 AWIIRRIMADEAQPLPDAA-LPRVVPLAWKTGTSY---------GYRDAWAIGVNA----RYVIGIWTGRPDGTPVVGQF 548 (770)
T ss_pred HHHHHHHHHHCCCCCHHHH-CCCCCCCEECCCCCC---------CCCCEEEEEECC----CEEEEEEEECCCCCCCCCCC
T ss_conf 9999999875044430110-023776244346788---------873338986359----85999998689999387740
Q ss_pred CHHHHHHHHHHHHHHHHH
Q ss_conf 214678999999999999
Q gi|254781103|r 571 AGINVAPMVGNIIRRSAS 588 (598)
Q Consensus 571 Gg~~AaPi~~~I~~~~~~ 588 (598)
T Consensus 549 G~~~AaPllf~i~~~L~~ 566 (770)
T PRK11240 549 GFASAVPLLNQVNNLLLS 566 (770)
T ss_pred CHHHHHHHHHHHHHHHHH
T ss_conf 602358799999998532