HHsearch alignment for GI: 254781103 and conserved domain: PRK11669

>PRK11669 pbpG D-alanyl-D-alanine endopeptidase; Provisional.
Probab=98.40  E-value=6.2e-07  Score=62.89  Aligned_cols=109  Identities=17%  Similarity=0.167  Sum_probs=70.7

Q ss_pred             CCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCC--C
Q ss_conf             34311122302320321112100147311134443232222233245664320123565443024032044213367--6
Q gi|254781103|r  281 AESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGIDSGLFTVKDLFDTRN--P  358 (598)
Q Consensus       281 a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaLe~g~i~~~~~~~~~~--~  358 (598)
T Consensus        38 i~A~sail~D~~TG~VLy~k-------------------n--~d~~~~pAS~TKlMTalv~le~~-~~ld~~v~v~~~~~   95 (308)
T PRK11669         38 LASGSAMVVDLNTNKVIYSS-------------------N--PDLVVPIASITKLMTAMVVLDAK-LPLDEKLKVDISQT   95 (308)
T ss_pred             CCCEEEEEEECCCCCEEEEE-------------------C--CCCCCCCHHHHHHHHHHHHHHCC-CCCCCEEEEEHHHH
T ss_conf             45408999999999690015-------------------8--29984878999999999998178-99887699767762


Q ss_pred             CCCCCCCCCCCCCCCCCCCHH----HHHHCCCCCEEEEEEECCC------CCCCHHHCCCCCCCC
Q ss_conf             322210112345432300399----9855036712354320233------332001101222576
Q gi|254781103|r  359 IKVGKHVIHDYHPQNRILTIP----EIFRYSSNIGAAQIADAMG------IQGHKEFLYRLGLLS  413 (598)
Q Consensus       359 ~~~~~~~i~~~~~~~g~it~~----~al~~S~Nv~~~~i~~~lg------~~~~~~~~~~fG~g~  413 (598)
T Consensus        96 ~~~~~~~-s~l~-~G~~~tv~dLl~~~li~S~NdAA~aLAe~i~Gs~~~Fv~~MN~kA~eLGm~~  158 (308)
T PRK11669         96 PEMKGVY-SRVR-LNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKALGMKN  158 (308)
T ss_pred             HHCCCCC-CCCC-CCCEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             0006874-4334-7988889999999987465299999999707679999999999999829998