HHsearch alignment for GI: 254781103 and conserved domain: TIGR02074

>TIGR02074 PBP_1a_fam penicillin-binding protein, 1A family; InterPro: IPR011816 Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (IPR011813 from INTERPRO). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages.; GO: 0008233 peptidase activity, 0016763 transferase activity transferring pentosyl groups, 0009252 peptidoglycan biosynthetic process, 0046677 response to antibiotic.
Probab=100.00  E-value=0  Score=467.89  Aligned_cols=313  Identities=25%  Similarity=0.368  Sum_probs=260.1

Q ss_pred             CCCCCCEEEEHHHHHHHHHHHHHHHCCCC----CC---------------------------------------------
Q ss_conf             68867425552576777776442100113----23---------------------------------------------
Q gi|254781103|r  251 KNLQPIRLALDLRIQNIVHQELVENKKKY----NA---------------------------------------------  281 (598)
Q Consensus       251 ~~g~dI~lTID~~lQ~~~e~~l~~~~~~~----~a---------------------------------------------  281 (598)
T Consensus       239 ~~Gl~iyTtlD~~~Q~~Ae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (700)
T TIGR02074       239 QGGLKIYTTLDLDMQKAAEKVLREGLREAGKQAGVRKSSESIILEELYEEKELLSLLSGLKTLLAKVRKVKKDAKKERVV  318 (700)
T ss_pred             HCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCHHCCC
T ss_conf             38989999448689999999997210223542014776112221232238887555414510133110011001110001


Q ss_pred             ------------------------------------------------CCCEEEEEECCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             ------------------------------------------------43111223023203211121001473111344
Q gi|254781103|r  282 ------------------------------------------------ESVGTVILNVSTGEVISMVSIPDYDPHEAFKG  313 (598)
Q Consensus       282 ------------------------------------------------~~gavVvmd~~TGeILAmas~P~~dpn~~~~~  313 (598)
T Consensus       319 i~Li~g~~~~~~~~~~~~~~~~NK~~~~~~gvi~v~~~~~~~~~~~~~~q~A~V~~D~~TG~v~A~VGG~dy~~~v~---  395 (700)
T TIGR02074       319 IDLIDGKAKIEIVDLLKAAKKDNKSVDLKKGVIVVKNKLGRALIAIPDLQAALVAIDPKTGAVRALVGGRDYGENVS---  395 (700)
T ss_pred             CCCCCCCEEHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCHHHHCCCCCEEEEEEECCCCEEEEEECCEECCCCCC---
T ss_conf             24754110023355567787617804421447998306870232053325006898458976899874612377764---


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHCC-CEECCCCCCCCCCCCC-------CCCCCCCCCCC-CCCCCHHHHHH
Q ss_conf             43232222233245664320123-565443024-0320442133676322-------21011234543-23003999855
Q gi|254781103|r  314 KKEGWFNRISYGIFEMGSIFKVF-TIAMGIDSG-LFTVKDLFDTRNPIKV-------GKHVIHDYHPQ-NRILTIPEIFR  383 (598)
Q Consensus       314 ~~~~~~Nra~~~~yePGStfKp~-t~aaaLe~g-~i~~~~~~~~~~~~~~-------~~~~i~~~~~~-~g~it~~~al~  383 (598)
T Consensus       396 ---~~fNRAT~a~RQPGStfKPf~VY~~Ale~G~~~~~~~~~~D~-P~~~~~~~~~G~~w~P~Ny~g~y~G~vtl~~ALa  471 (700)
T TIGR02074       396 ---SQFNRATQAKRQPGSTFKPFAVYAAALEKGLKYTPASILDDE-PITYSGDPGNGGGWEPKNYGGKYRGNVTLRQALA  471 (700)
T ss_pred             ---CCCCHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEC-CEEECCCCCCCCCCCEECCCCCEEECCCHHHHHH
T ss_conf             ---464201000268651265799999999850434701033303-3453588898895030006881461332999975


Q ss_pred             CCCCCEEEEEEECCC-CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCE----EEHHHCCCCCCH
Q ss_conf             036712354320233-332001101222576344686542111122335544100114687521----300100221100
Q gi|254781103|r  384 YSSNIGAAQIADAMG-IQGHKEFLYRLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHGLS----TTPLQTAVAAAA  458 (598)
Q Consensus       384 ~S~Nv~~~~i~~~lg-~~~~~~~~~~fG~g~~t~idlp~e~~g~~p~~~~~~~~~~~~~Gqg~~----~TPlqla~~~at  458 (598)
T Consensus       472 ~S~N~pAv~l~~~vG~~~~~~~~~~~~Gi~~~~~~---E---~------T~~~~~s~ALG-~~e~~~Gv~pl~~A~AYa~  538 (700)
T TIGR02074       472 QSINIPAVKLLDEVGFLDKVVALAKRFGITSPELP---E---K------TLDPVLSLALG-TVESRKGVSPLEMASAYAV  538 (700)
T ss_pred             HCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCC---C---C------CCCCCCCEEEC-CCCCCCCCCHHHHHHHHHH
T ss_conf             12238999999870782799999997088787666---6---5------88875650106-6543447568999987677


Q ss_pred             HHHCCEECCEEEEEEEECC-CCC------------------CCCCCCCHHHHHHHHHHHHHHHCCCCEEECC----CCCE
Q ss_conf             1107823010899986307-885------------------0320189999999999999873388464104----7973
Q gi|254781103|r  459 LINEGRLIPPTFMIRSREE-SEK------------------VSRIVLKKNTVKTMRSLLREGVTGGSGRRAF----VPGF  515 (598)
Q Consensus       459 iAN~G~~~~P~lv~~~~~~-~~~------------------~~~~vis~~~a~~l~~~l~~vv~~GTg~~a~----~~g~  515 (598)
T Consensus       539 FaN~G~~~eP~~I~~I~~~r~G~~~~~~~~~~~~a~~~~~~~~~~v~~~~~a~~m~~ml~~vv~-GTG~~A~~Y~~~~~~  617 (700)
T TIGR02074       539 FANGGKYVEPHFIRKIVDRRDGKVLYENERDDVLAKLKAKPETTQVISPATAYIMTDMLKSVVE-GTGRSAREYDKLPGR  617 (700)
T ss_pred             HHCCCEEECCEEEEEEEECCCCCEEEECCCCCEEEEEECCCCCCEECCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCC
T ss_conf             6417800246379999864788363404777416653068876211288889999998878756-677877753430686


Q ss_pred             EEEEECCEEEECCC--CCC--CCCCCEEEEEEEEECCCCEEEEEEEEECCCC------CCCC---CCCCHHHHHHHHHHH
Q ss_conf             57667240351268--876--6886217999997428880999999807888------8888---743214678999999
Q gi|254781103|r  516 EVGGKTGTAQKVIK--KRY--SDTLNFNSFLAVFPTTDPQYIVLSFMDSPKI------KERN---QLTAGINVAPMVGNI  582 (598)
Q Consensus       516 ~vaGKTGTAq~~~~--g~y--~~~~~~~~FvG~~P~~dP~~~v~V~v~~p~~------~~~~---~~~Gg~~AaPi~~~I  582 (598)
T Consensus       618 ~~AGKTGTT~~p~e~~~~y~~pSa~~D~WFvGyTP----~~v~aVW~G~D~~~~E~~~~~~~~a~~~~G~~~aa~~w~~f  693 (700)
T TIGR02074       618 PVAGKTGTTNNPEEETSKYIKPSAARDAWFVGYTP----YYVTAVWVGYDDKKKEYKLTLGKGALEVTGGGLAAPIWRDF  693 (700)
T ss_pred             CCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEECCC----CEEEEEEEEECCCCCCEEECCCCCEEEECCCCCCHHHHHHH
T ss_conf             32245488988713310343676554751350167----75899997404897431104665036515653107899999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q gi|254781103|r  583 IRRSAS  588 (598)
Q Consensus       583 ~~~~~~  588 (598)
T Consensus       694 M~~a~~  699 (700)
T TIGR02074       694 MAEALK  699 (700)
T ss_pred             HHHHCC
T ss_conf             999605