HHsearch alignment for GI: 254781103 and conserved domain: TIGR02214
>TIGR02214 spoVD_pbp stage V sporulation protein D; InterPro: IPR011927 This entry describes the SpoVD family of homologs of the cell division protein FtsI, a penicillin binding protein. This family is restricted to Bacillus subtilis and related Gram-positive species with known or suspected endospore formation capability. In these species, the functional equivalent of FtsI is desginated PBP-2B, a paralog of SpoVD..
Probab=100.00 E-value=0 Score=1008.65 Aligned_cols=521 Identities=29% Similarity=0.486 Sum_probs=483.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHEEEEEECCHHH-----HCEEEEEEECCCCCEEECCCCEEEEEEEEEEEEEEEHHHHCC--
Q ss_conf 7999999999999999864313434415323-----210004665179974576487081686977999997338099--
Q gi|254781103|r 73 RIGMTIVVCLVIYIILAIRIIQYGNIHPEPI-----APSMNIDEYGMSRPDIIDRNGEILATDIPTFSLYVEPHKVIS-- 145 (598)
Q Consensus 73 Ri~il~~v~~ii~~il~~rl~~lq~~~~~~~-----~~~~~~~~i~a~RG~I~DRNG~~LA~n~~~y~i~i~P~~i~~-- 145 (598)
T Consensus 1 r~~~~Li~~~~lf~~~~~rL~yv~v~~g~~y~~~A~d~W~~ei~~~A~RG~ILDRN~~eLAv~~~v~~V~~~l~~i~k~~ 80 (660)
T TIGR02214 1 RLIVILISIVVLFLILSLRLFYVQVFRGSRYKEMAEDQWTREIKIEAKRGRILDRNGEELAVSKSVYRVDLDLATIRKSL 80 (660)
T ss_pred CEEHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCCCCEECCCCCCEECCCCCCEEEECCCCEEEECHHHHHCCC
T ss_conf 93134789999999987421037897144478887652013731244327441228850046235236873268852200
Q ss_pred ------HHHHHHHHHHHHCCCCHHHHHHHHHCCC----CE--EEEECCCCHHHHHHHHH--HHCCCCEECCHHHHHHHHC
Q ss_conf ------8999999988807999899999851367----62--89613799999999763--1013750120233332100
Q gi|254781103|r 146 ------PDEIIEKLQIVLPNLDSEMIRRKLSSET----KF--QWLRRKLSPQQQKRILS--FGLPGVGFRLEKSRFYPAA 211 (598)
Q Consensus 146 ------~~~~~~~L~~il~~~~~~~i~~~l~~~~----~~--~~i~r~is~~~~~~I~~--~~lpGi~~~~~~~R~YP~~ 211 (598)
T Consensus 81 ~~k~~~~~eiA~~LA~vL-~md~~~v~~~i~k~~~~G~~~~~~~l~Rki~~dKa~~v~~st~~l~Gv~v~edskRYYp~G 159 (660)
T TIGR02214 81 EKKDTDQREIAEKLAEVL-EMDKEKVFKRITKKEKDGSPVRSAKLIRKIEKDKAEKVRESTLKLKGVIVSEDSKRYYPNG 159 (660)
T ss_pred CCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHCEEEEEEEEECCCCCCCCCCH
T ss_conf 210000799999999973-8877787767530177987145552101238889998831743410189746742227860
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCC-----CCCEEEECCCC------------CCCCCCCEEEEHHHHHHHHHHHHHH
Q ss_conf 000011111124687512310001466-----85168953666------------7688674255525767777764421
Q gi|254781103|r 212 SHASHVVGYVDIDNRGITGIEKFLDMQ-----GLTRVFTTNKG------------EKNLQPIRLALDLRIQNIVHQELVE 274 (598)
Q Consensus 212 ~lashiiGyv~~d~~G~~GlE~~~d~~-----g~~~~~~~~~~------------~~~g~dI~lTID~~lQ~~~e~~l~~ 274 (598)
T Consensus 160 ~flshvLG~t~sD~~GL~GlEl~YdkeL~G~pG~~~~e~d~~~~~~P~~~~~y~~P~dG~~l~LTID~~iqy~~Er~~~~ 239 (660)
T TIGR02214 160 DFLSHVLGFTNSDGEGLEGLELYYDKELKGLPGVRVAEVDANSLELPYAEDEYKKPVDGKDLVLTIDENIQYIVEREADE 239 (660)
T ss_pred HHHHHHCCCCCCCCCCCCCHHHHHCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
T ss_conf 02666525557760345231233141006899607988743677788541236688688733100002346798899999
Q ss_pred HCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCC------------CCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 0011323431112230232032111210014731113444------------3232222233245664320123565443
Q gi|254781103|r 275 NKKKYNAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGK------------KEGWFNRISYGIFEMGSIFKVFTIAMGI 342 (598)
Q Consensus 275 ~~~~~~a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~------------~~~~~Nra~~~~yePGStfKp~t~aaaL 342 (598)
T Consensus 240 a~~~~~a~g~~i~vMnpknGeILGM~nrP~ydpn~p~~~s~~~~~kdesa~LQ~~WRN~~v~d~yEPGS~FKiiT~~AA~ 319 (660)
T TIGR02214 240 ALSERKADGVSIIVMNPKNGEILGMSNRPSYDPNDPRDKSPEVKRKDESAKLQKSWRNRVVSDAYEPGSIFKIITSSAAM 319 (660)
T ss_pred HHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHH
T ss_conf 97526987589999769997176520678878777430374360542036886501885011221698477999999997
Q ss_pred HCCCEE-CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCC
Q ss_conf 024032-04421336763222101123454-3230039998550367123543202333320011012225763446865
Q gi|254781103|r 343 DSGLFT-VKDLFDTRNPIKVGKHVIHDYHP-QNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELP 420 (598)
Q Consensus 343 e~g~i~-~~~~~~~~~~~~~~~~~i~~~~~-~~g~it~~~al~~S~Nv~~~~i~~~lg~~~~~~~~~~fG~g~~t~idlp 420 (598)
T Consensus 320 ~eg~v~le~d~FYd~G~~~vg~~~~kCWK~~GHG~qtF~~vv~NSCN~GF~elG~~LG~~~L~~Yi~~FGFG~~tGIdL~ 399 (660)
T TIGR02214 320 EEGIVKLEKDKFYDDGSATVGGKKIKCWKPGGHGSQTFLEVVQNSCNVGFIELGERLGAEKLNEYIKKFGFGSKTGIDLP 399 (660)
T ss_pred HCCCEECCCCEEECCCEEEECCCEEEEECCCCCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 32740003650107841443482667676886955464787532777789988554076689999984289876886667
Q ss_pred CCCCCCCC--CCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCC------------CCCCCCC
Q ss_conf 42111122--335544100114687521300100221100110782301089998630788------------5032018
Q gi|254781103|r 421 EIQAPSYP--SQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESE------------KVSRIVL 486 (598)
Q Consensus 421 ~e~~g~~p--~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~------------~~~~~vi 486 (598)
T Consensus 400 GEA~GIl~n~~~v~pvdlAT~SfGQ~n~v~~iQ~~~A~~AvaNGG~L~~P~i~~e~~d~~~NG~~~v~~~f~P~~~~~vv 479 (660)
T TIGR02214 400 GEAAGILKNLEKVGPVDLATISFGQANTVTPIQLMTAVNAVANGGKLIQPHIMKEISDKENNGRKVVDKKFEPEVKRKVV 479 (660)
T ss_pred CCCEEEEECCCCCCCHHHHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCEEEEEC
T ss_conf 74103341376556122543310520004778999999987516656613312202175789515887530770123532
Q ss_pred CHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCEEEECC--CCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCC
Q ss_conf 999999999999987338846410479735766724035126--887668862179999974288809999998078888
Q gi|254781103|r 487 KKNTVKTMRSLLREGVTGGSGRRAFVPGFEVGGKTGTAQKVI--KKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKIK 564 (598)
Q Consensus 487 s~~~a~~l~~~l~~vv~~GTg~~a~~~g~~vaGKTGTAq~~~--~g~y~~~~~~~~FvG~~P~~dP~~~v~V~v~~p~~~ 564 (598)
T Consensus 480 ~~~~~~~l~~~LE~vVs~GsGk~AfIdGyrvGGKTGTAqKv~P~~G~Y~~g~YivSFvG~APa~dP~v~~~V~vD~P~~~ 559 (660)
T TIGR02214 480 DKETTEKLRLALEKVVSKGSGKDAFIDGYRVGGKTGTAQKVKPEDGGYLEGEYIVSFVGFAPADDPEVAVLVVVDNPKGV 559 (660)
T ss_pred CHHHHHHHHHHHHCEEECCCCCCCCCCCEEECCEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCC
T ss_conf 67789999886411451477756110346957730453444788893414866899864278898847999998679897
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 888743214678999999999999818998556
Q gi|254781103|r 565 ERNQLTAGINVAPMVGNIIRRSASMLGVKPVFL 597 (598)
Q Consensus 565 ~~~~~~Gg~~AaPi~~~I~~~~~~~~~i~P~~~ 597 (598)
T Consensus 560 ---~~FGG~vAAPv~~~v~~d~l~~lGi~P~~~ 589 (660)
T TIGR02214 560 ---EQFGGLVAAPVVGEVFNDILNYLGIKPRKE 589 (660)
T ss_pred ---CCCCCEEECHHHHHHHHHHHHHCCCCCCCC
T ss_conf ---201344874146889998887557689886