HHsearch alignment for GI: 254781103 and conserved domain: pfam00768

>pfam00768 Peptidase_S11 D-alanyl-D-alanine carboxypeptidase.
Probab=98.56  E-value=4.2e-08  Score=70.30  Aligned_cols=213  Identities=16%  Similarity=0.183  Sum_probs=113.9

Q ss_pred             CCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---CCCEECCCCCCCCC
Q ss_conf             343111223023203211121001473111344432322222332456643201235654430---24032044213367
Q gi|254781103|r  281 AESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGID---SGLFTVKDLFDTRN  357 (598)
Q Consensus       281 a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaLe---~g~i~~~~~~~~~~  357 (598)
T Consensus        10 i~A~saiv~D~~tg~iL~~k-------------------n--~~~~~~pAS~TKlMTa~v~le~~~~~~~~~~~~v~is~   68 (241)
T pfam00768        10 IAAKSAILVDYNTGKVLYEK-------------------N--ADQVRPIASITKLMTAYVVLEALKAGKLKEDDPVTISE   68 (241)
T ss_pred             CCCEEEEEEECCCCCEEEEE-------------------C--CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCH
T ss_conf             65129999999999790006-------------------9--09981778999999999999975628988544421018


Q ss_pred             CC-CCCC-CCCCC-CCCCCCCCCHHH----HHHCCCCCEEEEEEECCC------CCCCHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             63-2221-01123-454323003999----855036712354320233------33200110122257634468654211
Q gi|254781103|r  358 PI-KVGK-HVIHD-YHPQNRILTIPE----IFRYSSNIGAAQIADAMG------IQGHKEFLYRLGLLSKLETELPEIQA  424 (598)
Q Consensus       358 ~~-~~~~-~~i~~-~~~~~g~it~~~----al~~S~Nv~~~~i~~~lg------~~~~~~~~~~fG~g~~t~idlp~e~~  424 (598)
T Consensus        69 ~~~~~~~~~~~s~~~l~~G~~~tv~dLl~~lll~S~NdAA~aLA~~v~Gs~~~Fv~~MN~~A~~LGm~~-T~F~np---~  144 (241)
T pfam00768        69 YAYALGNFRGSSNMFLKPGDKVTVRDLLRGLLVSSGNDAAVALAEKIAGSEKAFVKMMNAKAKQLGLKN-TRFVNP---T  144 (241)
T ss_pred             HHHHHCCCCCCCEEEECCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC-CEEECC---C
T ss_conf             899863788873465348999889999999987564599999999845829999999999999819999-866668---7


Q ss_pred             CCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             11223355441001146875213001002211001107823010899986307885032018999999999999987338
Q gi|254781103|r  425 PSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKNTVKTMRSLLREGVTG  504 (598)
Q Consensus       425 g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~~~~vis~~~a~~l~~~l~~vv~~  504 (598)
T Consensus       145 GL~~~--------------~~~sTA~Dla~l~~~~~~~----~~~~~~~~~~~~~~~~~----~~---------~~~~~~  193 (241)
T pfam00768       145 GLDNH--------------GQYSSARDLAILARALIKD----LPEVLSITKEKSATFNT----PI---------YKINWM  193 (241)
T ss_pred             CCCCC--------------CCEECHHHHHHHHHHHHHH----CHHHEEEEEEEEEEECC----CC---------CEEEEE
T ss_conf             77788--------------8666799999999999874----95840888778999747----87---------358997


Q ss_pred             CCEEECCCCCEE-EEEECCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEC
Q ss_conf             846410479735-76672403512688766886217999997428880999999807
Q gi|254781103|r  505 GSGRRAFVPGFE-VGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDS  560 (598)
Q Consensus       505 GTg~~a~~~g~~-vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~~dP~~~v~V~v~~  560 (598)
T Consensus       194 NtN~ll~~~~~~v~G~KTG~T~~AG----------~clv~~a~~~g~~~-I~VvLgs  239 (241)
T pfam00768       194 NTNGLLYRKGGNVDGLKTGYTKEAG----------YCLVATATEGGMRV-ISVVLNA  239 (241)
T ss_pred             CCCCHHHCCCCCEEEEEEEEECCCC----------CEEEEEEEECCEEE-EEEEECC
T ss_conf             3795100579857999952531666----------45999999999899-9999499