HHsearch results for GI: 254781103 and protein with PDBid: 1e25_A
>1e25_A Extended-spectrum beta-lactamase PER-1; hydrolase, antibiotic resistance, class A cephalosporinase; 1.9A {Pseudomonas aeruginosa} SCOP: e.3.1.1
Probab=99.41 E-value=1.1e-12 Score=98.15 Aligned_cols=254 Identities=12% Similarity=0.130 Sum_probs=151.2
Q ss_pred HHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---C
Q ss_conf 7764421001132343111223023203211121001473111344432322222332456643201235654430---2
Q gi|254781103|r 268 VHQELVENKKKYNAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGID---S 344 (598)
Q Consensus 268 ~e~~l~~~~~~~~a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaLe---~ 344 (598)
+++.|.+.++.+++..| +++-|..||+.++ |||+ ..|+|+|++|+++++++|+ +
T Consensus 5 L~~~i~~i~~~~~~~~g-v~v~~~~~~~~~~------~n~~----------------~~~~~AS~~Kl~~a~~~l~~i~~ 61 (282)
T 1e25_A 5 LKEQIESIVIGKKATVG-VAVWGPDDLEPLL------INPF----------------EKFPMQSVFKLHLAMLVLHQVDQ 61 (282)
T ss_dssp HHHHHHHHHTTSSSEEE-EEEECTTCSSCEE------ESTT----------------CCEECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEE-EEEEECCCCEEEE------ECCC----------------CCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99999999972799599-9999899981899------8899----------------84554899999999999999875
Q ss_pred CCEECCCCCCCCCCCC-CCCCCCC-C-CCCCCCCCCHHH----HHHCCCCCEEEEEEECCC-CCCCHHHCCCCCCCCCCC
Q ss_conf 4032044213367632-2210112-3-454323003999----855036712354320233-332001101222576344
Q gi|254781103|r 345 GLFTVKDLFDTRNPIK-VGKHVIH-D-YHPQNRILTIPE----IFRYSSNIGAAQIADAMG-IQGHKEFLYRLGLLSKLE 416 (598)
Q Consensus 345 g~i~~~~~~~~~~~~~-~~~~~i~-~-~~~~~g~it~~~----al~~S~Nv~~~~i~~~lg-~~~~~~~~~~fG~g~~t~ 416 (598)
|.+++++.+....... .++.... . .-..+..+|+++ .+..|.|+....+++.+| .+.+..+++++|.....
T Consensus 62 g~l~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~Ll~~mi~~SdN~Aa~~L~~~lgg~~~~n~~~~~~g~~~~~- 140 (282)
T 1e25_A 62 GKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFSVPVQQLLQYSVSHSDNVACDLLFELVGGPAALHDYIQSMGIKETA- 140 (282)
T ss_dssp TSSCTTCEEEEETTTSCCSSCCTHHHHSCSSEEEEEHHHHHHHHHHHCCHHHHHHHHHHHTHHHHHHHHHHHTTCCSBC-
T ss_pred CCCCCCCCCCCCHHHHHCCCCCCCHHEEECCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC-
T ss_conf 9988310025768887416887420021079980569999999999595199999999828846899999983034312-
Q ss_pred CCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHH
Q ss_conf 68654211112233554410011468752130010022110011078230108999863078850320189999999999
Q gi|254781103|r 417 TELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKNTVKTMRS 496 (598)
Q Consensus 417 idlp~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~~~~vis~~~a~~l~~ 496 (598)
+.-+ .+..+.. ...+..-..||.+|+..+..+.++ ..+++.....+.+
T Consensus 141 ~~~~---~~~~~~~--------~~~~~~n~~Ta~d~~~ll~~l~~~---------------------~~~~~~~~~~~~~ 188 (282)
T 1e25_A 141 VVAN---EAQMHAD--------DQVQYQNWTSMKGAAEILKKFEQK---------------------TQLSETSQALLWK 188 (282)
T ss_dssp CCCC---HHHHHHC--------TTGGGGSEECHHHHHHHHHHHHTT---------------------CSSCHHHHHHHHH
T ss_pred CCCC---CCCCCCC--------CCCCCCCHHHHHHHHHHHHHHHHC---------------------CCCCHHHHHHHHH
T ss_conf 3466---4455655--------578742133199999999999848---------------------8668889999999
Q ss_pred HHHHHHCCCCEEECC-CCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEE-ECCCCEEEEEEEEECCCCCCCCCCCCHHH
Q ss_conf 999873388464104-7973576672403512688766886217999997-42888099999980788888887432146
Q gi|254781103|r 497 LLREGVTGGSGRRAF-VPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVF-PTTDPQYIVLSFMDSPKIKERNQLTAGIN 574 (598)
Q Consensus 497 ~l~~vv~~GTg~~a~-~~g~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~-P~~dP~~~v~V~v~~p~~~~~~~~~Gg~~ 574 (598)
.|.......+..... ..++.++.|||+......+ + ...+.+|+. +.++.+|+++|+..+|... ...
T Consensus 189 ~~~~~~~~~~~l~~~~~~~~~v~~ktG~~~~~gg~-~----g~~~d~giv~~~~g~~~iiaV~~~~~~~~-------~~~ 256 (282)
T 1e25_A 189 WMVETTTGPERLKGLLPAGTVVAHKTGTSQIKAGK-T----AATNDLGIILLPDGRPLLVAVFVKDSAES-------SRT 256 (282)
T ss_dssp HHHSCCSCTTSTTTTSCTTCCEEEEEEECCEETTE-E----EEEEEEEEEECTTSCEEEEEEEEEEECSC-------HHH
T ss_pred HHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC-E----EEEEEEEEEECCCCCEEEEEEEECCCCCC-------HHH
T ss_conf 98548644433123488887543214764546875-3----48998999986999989999994599889-------889
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 789999999999998
Q gi|254781103|r 575 VAPMVGNIIRRSASM 589 (598)
Q Consensus 575 AaPi~~~I~~~~~~~ 589 (598)
...++.+|.+.+..|
T Consensus 257 ~~~~i~~i~~~~~~~ 271 (282)
T 1e25_A 257 NEAIIAQVAQTAYQF 271 (282)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999998