HHsearch results for GI: 254781103 and protein with PDBid: 1w79_A
>1w79_A D-alanyl-D-alanine carboxypeptidase; penicillin-binding, peptidoglycan, transpeptidase, antibiotic resistance, hydrolase; 1.8A {Actinomadura SP} SCOP: e.3.1.3 PDB: 1w8q_A 1w8y_A* 2vgj_A* 2vgk_A* 2wke_A*
Probab=96.63 E-value=0.0014 Score=40.17 Aligned_cols=57 Identities=18% Similarity=0.161 Sum_probs=37.5
Q ss_pred EEEEECCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 57667240351268876688621799999742888099999980788888887432146789999999999998189
Q gi|254781103|r 516 EVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSASMLGV 592 (598)
Q Consensus 516 ~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~~dP~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~~~I~~~~~~~~~i 592 (598)
.|-+||||=. ...+++||....+.+|++++++++.. +. .|-++--+|++.++.+.+-
T Consensus 406 ~v~aKTGTL~-----------~V~sLaGyv~~~~G~l~Fsi~~N~~~--------~~-~~r~~~D~i~~~la~~~~~ 462 (489)
T 1w79_A 406 VVEAKTGTMS-----------GVSALSGYVPGPEGELAFSIVNNGHS--------GP-APLAVQDAIAVRLAEYAGH 462 (489)
T ss_dssp TCEEECCEET-----------TEEEEEEEECCTTCCEEEEEEEECCS--------SS-CCHHHHHHHHHHHHHHTTC
T ss_pred EEEEEEEEEC-----------CCEEEEEEEECCCCCEEEEEEECCCC--------CH-HHHHHHHHHHHHHHHHCCC
T ss_conf 4999985006-----------94783899996999899999978998--------50-4399999999999864577