HHsearch results for GI: 254781103 and protein with PDBid: 2jch_A
>2jch_A Penicillin-binding protein 1B; peptidoglycan synthesis multifunctional enzyme, cell WALL, peptidoglycan, gamma lactam antibiotics; HET: PL7; 2.4A {Streptococcus pneumoniae} PDB: 2jci_A* 2je5_A*
Probab=100.00 E-value=0 Score=442.91 Aligned_cols=300 Identities=18% Similarity=0.206 Sum_probs=248.1
Q ss_pred CCCCCCEEEEHHHHHHHHHHHHHHHCCCCCC----CCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6886742555257677777644210011323----431112230232032111210014731113444323222223324
Q gi|254781103|r 251 KNLQPIRLALDLRIQNIVHQELVENKKKYNA----ESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGI 326 (598)
Q Consensus 251 ~~g~dI~lTID~~lQ~~~e~~l~~~~~~~~a----~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~ 326 (598)
..|.+|+||||+++|..+|+++.+....... ..+++|+|||+||+|||||+.|+|+++. .||++++.
T Consensus 314 ~gG~~I~tTlD~~lQ~~ae~al~~~~~~~~~~~~~~~~a~Vv~Dp~TG~IlAmvGg~~~~~~~---------~n~a~~a~ 384 (720)
T 2jch_A 314 NGGYKITTTIDQKIHSAMQSAVADYGYLLDDGTGRVEVGNVLMDNQTGAILGFVGGRNYQENQ---------NNHAFDTK 384 (720)
T ss_dssp HSCCEEEECCCHHHHHHHHHHHHHHGGGGCCSSSCCEEEEEEEETTTCBEEEEECCSCTTTCC---------CCTTTTCC
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCC---------CCCCHHHH
T ss_conf 088079984156888999999999876520124120367999988999788984278500112---------32200244
Q ss_pred CCCCCCCHHHH-HHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHHHCCCCCEEEEEEECCCCCCC--
Q ss_conf 56643201235-654430240320442133676322210112345-43230039998550367123543202333320--
Q gi|254781103|r 327 FEMGSIFKVFT-IAMGIDSGLFTVKDLFDTRNPIKVGKHVIHDYH-PQNRILTIPEIFRYSSNIGAAQIADAMGIQGH-- 402 (598)
Q Consensus 327 yePGStfKp~t-~aaaLe~g~i~~~~~~~~~~~~~~~~~~i~~~~-~~~g~it~~~al~~S~Nv~~~~i~~~lg~~~~-- 402 (598)
++|||+||||+ +++|||+|.+++++.++|......+....+++. ..+|.+++++||++|||++++++...++...+
T Consensus 385 rqpGSs~Kp~~~yaaAle~G~~~~~t~~~d~~~~~~~~~~~~~~~~~~~G~vtl~~Al~~S~Nv~a~~~~~~~~~~g~~~ 464 (720)
T 2jch_A 385 RSPASTTKPLLAYGIAIDQGLMGSETILSNYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYWTYRMLRENGVDV 464 (720)
T ss_dssp BCCGGGGHHHHTHHHHHHTTSCCTTCEEECSCCBCTTSCBCCBTTBCCCSEEEHHHHHHHTCSHHHHHHHHHHHHTTCCH
T ss_pred HHHCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 44013220257799998649999861773278333468853146666787332889988467745899999850111569
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCC-
Q ss_conf 0110122257634468654211112233554410011468752130010022110011078230108999863078850-
Q gi|254781103|r 403 KEFLYRLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKV- 481 (598)
Q Consensus 403 ~~~~~~fG~g~~t~idlp~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~- 481 (598)
..++++||+.. |.. ...++++|+++.+||||||++|++|||+|.+++||+|+++.+.++++
T Consensus 465 ~~~~~~~G~~~------~~~------------~~~slalGg~~~vTplqma~aYat~ANgG~~~~P~~I~~I~d~~G~vi 526 (720)
T 2jch_A 465 KGYMEKMGYEI------PEY------------GIESLPMGGGIEVTVAQHTNGYQTLANNGVYHQKHVISKIEAADGRVV 526 (720)
T ss_dssp HHHHHHTTCCC------SCC------------CCTTGGGTTTCCBCHHHHHHHHHHHHTTTEECCCBSEEEEECTTSCEE
T ss_pred HHHHHHCCCCC------CCC------------CCCCHHHHCCCCCCCHHHHHHHHHHHCCCEEECCEEEEEEECCCCCEE
T ss_conf 99999739986------555------------653323412234200342213003114987815689998987999786
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHHCCCCEEECC---------CCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEEE
Q ss_conf ------320189999999999999873388464104---------79735766724035126887668862179999974
Q gi|254781103|r 482 ------SRIVLKKNTVKTMRSLLREGVTGGSGRRAF---------VPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVFP 546 (598)
Q Consensus 482 ------~~~vis~~~a~~l~~~l~~vv~~GTg~~a~---------~~g~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P 546 (598)
.++++|+++++.+++||+.||+.|||+.++ ++++++||||||+| +..++||+||.
T Consensus 527 ~~~~~~~~~vis~~~A~~~~~~L~~vv~~gt~~~~~~~~~~~~~~~~~~~vAGKTGTt~---------~~~DaWFvGyt- 596 (720)
T 2jch_A 527 YEYQDKPVQVYSKATATIMQGLLREVLSSRVTTTFKSNLTSLNPTLANADWIGKTGTTN---------QDENMWLMLST- 596 (720)
T ss_dssp EECCCCCEESSCHHHHHHHHHHHHHHHHHCSSCCHHHHHHHHCHHHHTSCCEEEEEECT---------TSCEEEEEEEC-
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEECCCC---------CCCEEEEEEEC-
T ss_conf 02688755666989999999999999871654110146665465557986257704789---------85348999972-
Q ss_pred CCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 28880999999807888888874321467899999999999981
Q gi|254781103|r 547 TTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSASML 590 (598)
Q Consensus 547 ~~dP~~~v~V~v~~p~~~~~~~~~Gg~~AaPi~~~I~~~~~~~~ 590 (598)
|+|+++|||.+++.......+|+..|+|+|++||+.+....
T Consensus 597 ---p~~~~~VWvG~d~~~~~~~~~G~~~a~~~~~~i~~~~~~~~ 637 (720)
T 2jch_A 597 ---PRLTLGGWIGHDDNHSLSQQAGYSNNSNYMAHLVNAIQQAS 637 (720)
T ss_dssp ---SSEEEEEEEECTTCCCCCTTTTTTHHHHHHHHHHHHHHHTS
T ss_pred ---CCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf ---99079999988999857676475425999999999998737