HHsearch results for GI: 254781103 and protein with PDBid: 3p09_A
>3p09_A Beta-lactamase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich, cytosol; HET: MSE; 1.90A {Francisella tularensis subsp}
Probab=99.39 E-value=5.2e-12 Score=93.77 Aligned_cols=250 Identities=16% Similarity=0.142 Sum_probs=148.4
Q ss_pred HHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---CC
Q ss_conf 764421001132343111223023203211121001473111344432322222332456643201235654430---24
Q gi|254781103|r 269 HQELVENKKKYNAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGID---SG 345 (598)
Q Consensus 269 e~~l~~~~~~~~a~~gavVvmd~~TGeILAmas~P~~dpn~~~~~~~~~~~Nra~~~~yePGStfKp~t~aaaLe---~g 345 (598)
++.+.+..++++++ -++.++|.+||++++. | -...|+|.|++|.++++++|+ +|
T Consensus 25 ~~~~~~~~~~~~~~-~gv~~~Dl~tG~~~~~------n----------------~d~~~p~AS~~Kl~~~~~~l~~i~~g 81 (290)
T 3p09_A 25 DDSFKNLENKYDGK-IGIYTLNTDDKTNIKY------N----------------ESYHFPICSVFKFLLVGAILDYDMHN 81 (290)
T ss_dssp HHHHHHHHHHHCSE-EEEEEECC----CCEE------S----------------TTSCEECGGGHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHCCCE-EEEEEEECCCCCEEEE------C----------------CCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 89999999863983-9999998999988988------8----------------99750426799999999999986548
Q ss_pred CEECCCCCCCCCC-CCCCC-CCCCCCCCCCCCC---CHHHHHHCCCCCEEEEEEECCC-CCCCHHHCCCCCCCCCCCCCC
Q ss_conf 0320442133676-32221-0112345432300---3999855036712354320233-332001101222576344686
Q gi|254781103|r 346 LFTVKDLFDTRNP-IKVGK-HVIHDYHPQNRIL---TIPEIFRYSSNIGAAQIADAMG-IQGHKEFLYRLGLLSKLETEL 419 (598)
Q Consensus 346 ~i~~~~~~~~~~~-~~~~~-~~i~~~~~~~g~i---t~~~al~~S~Nv~~~~i~~~lg-~~~~~~~~~~fG~g~~t~idl 419 (598)
.+++++.+..... +..++ ........ +... .+..++..|+|.....+...+| .+.+.++++++|... +.++.
T Consensus 82 ~~~l~~~v~i~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~SdN~aa~~L~~~~gg~~~~~~~~~~~g~~~-~~l~~ 159 (290)
T 3p09_A 82 QGFLDKKIPINQDDIGKLGYAPITAKNV-GKTLTISQLNYAAILSDSPASNILVRELGGLQNLNKFIKKLGDND-TIITA 159 (290)
T ss_dssp TTGGGCEEECCHHHHTTCCCCTTGGGCT-TSEEEHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCCS-CBCCC
T ss_pred CCCCCCEEEECHHHHHCCCCCCCEEECC-CCEEHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCHH-HHCCC
T ss_conf 9776651685299951368875434348-836569999750446782999999999638548999999839723-21267
Q ss_pred CCCCCCCCCCCCCCCCCEECCCCCCCEEEHHHCCCCCCHHHHCCEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 54211112233554410011468752130010022110011078230108999863078850320189999999999999
Q gi|254781103|r 420 PEIQAPSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKNTVKTMRSLLR 499 (598)
Q Consensus 420 p~e~~g~~p~~~~~~~~~~~~~Gqg~~~TPlqla~~~atiAN~G~~~~P~lv~~~~~~~~~~~~~vis~~~a~~l~~~l~ 499 (598)
... .....+. . ...-..||-+|+..+..+..+ ..+++.....+.++|.
T Consensus 160 ~~~---~~~~~~~-~-------~~~n~tTa~dla~ll~~l~~~---------------------~~~~~~~~~~~~~~~~ 207 (290)
T 3p09_A 160 DEP---EINYTQP-H-------SNINKTTPKAITKDIYKLAFG---------------------NILDKKHKDIFIKYLQ 207 (290)
T ss_dssp CTT---GGGCCCT-T-------BCTTEECHHHHHHHHHHHHHS---------------------SSSCHHHHHHHHHHHH
T ss_pred CCC---CCCCCCC-C-------CCCCCCCHHHHHHHHHHHHHC---------------------CCCCHHHHHHHHHHHH
T ss_conf 763---2235789-9-------755634899999999999718---------------------9889899999999984
Q ss_pred HHHCCCC-EEECCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEEEEEC-CCCEEEEEEEEECCCCCCCCCCCCHHHHHH
Q ss_conf 8733884-64104797357667240351268876688621799999742-888099999980788888887432146789
Q gi|254781103|r 500 EGVTGGS-GRRAFVPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPT-TDPQYIVLSFMDSPKIKERNQLTAGINVAP 577 (598)
Q Consensus 500 ~vv~~GT-g~~a~~~g~~vaGKTGTAq~~~~g~y~~~~~~~~FvG~~P~-~dP~~~v~V~v~~p~~~~~~~~~Gg~~AaP 577 (598)
....... ......+++.+|.|||+... .+ ..-.+|+.-. +...|+++|+...+..... . .+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~v~~KtG~~~~-------~g--~~~d~giv~~~~g~~yii~V~~~~~~~~~~--~----~~~~ 272 (290)
T 3p09_A 208 DNNTGANRIAFSMPKDWIIGDKTGTCGQ-------YA--ATNDVAIIWPKNQQPIALGILYTNPNDKNA--P----SNEE 272 (290)
T ss_dssp HCCTTTTTGGGGSCTTSEEEEEEEECSS-------TT--CEEEEEEEECTTSCCEEEEEEEECTTCTTC--C----CCHH
T ss_pred CCCCCCCCHHCCCCCCCEEEEEECCCCC-------CC--CEEEEEEEECCCCCEEEEEEECCCCCCCCH--H----HHHH
T ss_conf 3851322110148988779960356567-------87--578999998289987999999068975475--9----9999
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 9999999999981
Q gi|254781103|r 578 MVGNIIRRSASML 590 (598)
Q Consensus 578 i~~~I~~~~~~~~ 590 (598)
++++|.+.++..+
T Consensus 273 ~ia~i~~~v~~~~ 285 (290)
T 3p09_A 273 IIQQAAKLIANDL 285 (290)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999999