PSIBLAST alignment of GI: 254781103 and protein with PDB id: 1vqq
>gi|58177060|pdb|1VQQ|A Chain A, Structure Of Penicillin Binding Protein 2a From Methicillin Resistant Staphylococcus Aureus Strain 27r At 1.80 A Resolution. Length = 646
>gi|58177061|pdb|1VQQ|B Chain B, Structure Of Penicillin Binding Protein 2a From Methicillin Resistant Staphylococcus Aureus Strain 27r At 1.80 A Resolution Length = 646
Score = 155 bits (392), Expect = 2e-35, Method: Composition-based stats.
Identities = 90/523 (17%), Positives = 190/523 (36%), Gaps = 76/523 (14%)
Query: 105 PSMNIDEYGMSRPDIIDRNGEILATDIPTFSLYVEPHKVISPDEIIEKLQIVLPNLDSEM 164
S++I+ R I+DRN LA + + + P V D + + L + +
Sbjct: 118 QSIHIENLKSERGKILDRNNVELANTGTAYEIGIVPKNVSKKDY--KAIAKELS-ISEDY 174
Query: 165 IRRKLSSE----TKFQWLR--RKLSPQQQKRILSFGLPGVGFRLEKSRFYPAASHASHVV 218
I++++ F L+ +K+ F L +SR YP SH++
Sbjct: 175 IKQQMDQNWVQDDTFVPLKTVKKMDEYLSDFAKKFHL---TTNETESRNYPLEKATSHLL 231
Query: 219 GYVDIDN-----------------RGITGIEKFL-----DMQGLTRVFTTN--------- 247
GYV N G G+EK G +
Sbjct: 232 GYVGPINSEELKQKEYKGYKDDAVIGKKGLEKLYDKKLQHEDGYRVTIVDDNSNTIAHTL 291
Query: 248 --KGEKNLQPIRLALDLRIQNIVHQELVENKKKYNAESVGTVILNVSTGEVISMVSIPDY 305
K +K+ + I+L +D ++Q ++ + + ++ TGE++++VS P Y
Sbjct: 292 IEKKKKDGKDIQLTIDAKVQKSIYNNMKN-------DYGSGTAIHPQTGELLALVSTPSY 344
Query: 306 DPHEAFKGKKEGWFNRI-----------SYGIFEMGSIFKVFTIAMGIDSGLFTVKDLFD 354
D + G +N++ GS K+ T +G+++ K +
Sbjct: 345 DVYPFMYGMSNEEYNKLTEDKKEPLLNKFQITTSPGSTQKILTAMIGLNNKTLDDKTSYK 404
Query: 355 TRNPIK-----VGKHVIHDYHPQNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRL 409
G + + Y N + + + S NI A++A +G + ++ + +L
Sbjct: 405 IDGKGWQKDKSWGGYNVTRYEVVNGNIDLKQAIESSDNIFFARVALELGSKKFEKGMKKL 464
Query: 410 GLLSKLETEL-PEIQAPSYPSQWKRIHSLTISFGHGLS-TTPLQTAVAAAALINEGRLIP 467
G+ + ++ S + I +G G P+Q +AL N G +
Sbjct: 465 GVGEDIPSDYPFYNAQISNKNLDNEILLADSGYGQGEILINPVQILSIYSALENNGNINA 524
Query: 468 PTFMIRSREESEKVSRIVLKKNTVKTMRSLLREGVTGGSGR-RAFVPGFEVGGKTGTAQK 526
P + ++ + K + ++ K + + +++ V + + + + GK+GTA+
Sbjct: 525 PHLLKDTKNKVWK--KNIISKENINLLTDGMQQVVNK-THKEDIYRSYANLIGKSGTAEL 581
Query: 527 VIKKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKIKERNQL 569
+K+ + F++ +P ++ + + K
Sbjct: 582 KMKQGET-GRQIGWFISY-DKDNPNMMMAINVKDVQDKGMASY 622