PSIBLAST alignment of GI: 254781103 and protein with PDB id: 2waf
>gi|224036199|pdb|2WAF|A Chain A, Penicillin-Binding Protein 2b (Pbp-2b) From Streptococcus Pneumoniae (Strain R6) Length = 682
Score = 74.4 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 49/139 (35%), Gaps = 15/139 (10%)
Query: 62 RRRKVIAHSKNRIGMTIVVCLVIYIILAIRIIQYGNIHPEPI-----APSMNIDEYGMSR 116
R+ R+ + + +++++ + R++ ++ + + S +R
Sbjct: 1 MRKFNSHSIPIRLNLLFSIVILLFMTIIGRLLYMQVLNKDFYEKKLASASQTKITSSSAR 60
Query: 117 PDIIDRNGEILATDIPTFSLYVEPHK---VISPDEIIEKLQIVLPNLDSEMIRRKLSSET 173
+I D +G+ L + + E +KL + + R+L+
Sbjct: 61 GEIYDASGKPLVENTLKQVVSFTRSNKMTATDLKETAKKLLTYVSISSPNLTERQLADY- 119
Query: 174 KFQWLRRKLSPQQQKRILS 192
+L P+ K+I+
Sbjct: 120 ---YLA---DPEIYKKIVE 132