RPSBLAST alignment of GI: 254781103 and protein with PDBid: 1nrf
>1nrf_A Regulatory protein BLAR1; penicillin-receptor, beta-lactamase induction, penicillin-binding protein, membrane protein; 2.50A {Bacillus licheniformis} SCOP: e.3.1.1 Length = 262
Score = 112 bits (282), Expect = 2e-25
Identities = 47/330 (14%), Positives = 99/330 (30%), Gaps = 88/330 (26%)
Query: 265 QNIVHQELVENKKKYNAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWFNRISY 324
N+ +++ K++A G V+ N + + Y+ E+
Sbjct: 17 TNVEYEDYSTFFDKFSASG-GFVLFNSNRKKYTI------YNRKESTSR----------- 58
Query: 325 GIFEMGSIFKVFTIAMGIDSGLFTVKDLFDTRNPIKVGKHVIHDYHPQNRILTIPEIFRY 384
F S +KVF+ + ++SG+ T D T + + Y N+ +
Sbjct: 59 --FAPASTYKVFSALLALESGIITKNDSHMTWD------GTQYPYKEWNQDQDLFSAMSS 110
Query: 385 SSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELPEIQAPSYPSQWKRIHSLTISFGHG 444
S+ ++ +G + +L + ++ + P+ W
Sbjct: 111 STTWYFQKLDRQIGEDHLRHYLKSIHYGNE------DFSVPA--DYWL---------DGS 153
Query: 445 LSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKNTVKTMRSLLREGVTG 504
L +PL+ + + ++T++
Sbjct: 154 LQISPLEQVNILKKFYDNEFDFKQS--------------------NIETVK--------- 184
Query: 505 GSGRRAFVPGFEVGGKTGTAQKVIKKRYSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKIK 564
S R G + GKTGT+ + F+ T D + + K
Sbjct: 185 DSIRLEESNGRVLSGKTGTSVINGELHAG------WFIGYVETADNTFFFAVHIQGEKR- 237
Query: 565 ERNQLTAGINVAPMVGNIIRRSASMLGVKP 594
AG + A + +I+ + G+ P
Sbjct: 238 -----AAGSSAAEIALSILDK----KGIYP 258