RPSBLAST alignment of GI: 254781103 and protein with PDBid: 1qme
>1qme_A Penicillin-binding protein 2X; peptidoglycan synthesis, resistance, cell WALL, transmembrane; 2.4A {Streptococcus pneumoniae} SCOP: d.11.1.1 d.11.1.1 d.175.1.1 e.3.1.1 PDB: 1qmf_A* 1pyy_A* 1rp5_A 1pmd_A 1k25_A 2zc3_B* 2z2l_B* 2z2m_B* 2zc4_B* 2zc3_A* 2z2l_A* 2z2m_A* 2zc4_A* 2zc3_C* 2z2l_C* 2z2m_C* 2zc4_C* Length = 702
Score = 230 bits (586), Expect = 7e-61
Identities = 100/554 (18%), Positives = 205/554 (37%), Gaps = 81/554 (14%)
Query: 115 SRPDIIDRNGEILATDIPTFSLYVEPHKVISP-------------DEIIEKLQIVLPNLD 161
R I DRNG +A D ++++Y + +++ E L +++
Sbjct: 27 KRGTIYDRNGVPIAEDATSYNVYAVIDENYKSATGKILYVEKTQFNKVAEVFHKYL-DME 85
Query: 162 SEMIRRKLSSE----TKFQWLRRKLSPQQ----QKRILSFGLPGVGFRLEKSRFYPAASH 213
+R +LS F ++ +K + + + G+ F +R YP
Sbjct: 86 ESYVREQLSQPNLKQVSFGAKGNGITYANMMSIKKELEAAEVKGIDFTTSPNRSYPNGQF 145
Query: 214 ASHVVGYVDIDNR--------GITGIEKFLDMQ-----GLTRVFTTNKGE---------- 250
AS +G + G +G+E L+ G+ G
Sbjct: 146 ASSFIGLAQLHENEDGSKSLLGTSGMESSLNSILAGTDGIITYEKDRLGNIVPGTEQVSQ 205
Query: 251 --KNLQPIRLALDLRIQNIVHQELVENKKKYNAESVGTVILNVSTGEVISMVSIPDYDPH 308
+ + + + +Q+ + ++ ++K + + +++ TGE+++ P +D
Sbjct: 206 RTMDGKDVYTTISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDAD 265
Query: 309 E-AFKGKKEGWFNRISYGIFEMGSIFKVFTIAMGIDSGLFTVKDLFDTRNPIKVGKHV-- 365
+ W + + +E GS KV +A ID+ F ++F++ +
Sbjct: 266 TKEGITEDFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGEVFNSSELKIADATIRD 325
Query: 366 --IHDYHPQNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELPEIQ 423
+++ R++T + F +SSN+G + MG ++L R L +
Sbjct: 326 WDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLNRFKFGVPTRFGLTDEY 385
Query: 424 APSYPSQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIR--------SR 475
A P ++ SFG G+S T Q A A+ N+G ++ P F+ +R
Sbjct: 386 AGQLP-ADNIVNIAQSSFGQGISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTAR 444
Query: 476 EESEKVSRIVLKKNTVKTMRSLLREGVT----------GGSGRRAFVPGFEVGGKTGTAQ 525
+ +++ + K+ R+ + T VPG V K+GTAQ
Sbjct: 445 KSQKEIVGNPVSKDAASLTRTNMVLVGTDPVYGTMYNHSTGKPTVTVPGQNVALKSGTAQ 504
Query: 526 KVIKKR----YSDTLNFNSFLAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVGN 581
+K T S +++ P +P +I+ + P+ +GI +
Sbjct: 505 IADEKNGGYLVGLTDYIFSAVSMSPAENPDFILYVTVQQPEH------YSGIQLGEFANP 558
Query: 582 IIRRSASMLGVKPV 595
I+ R+++M +
Sbjct: 559 ILERASAMKDSLNL 572