RPSBLAST alignment of GI: 254781103 and protein with PDBid: 2v2f

>2v2f_F Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc6_B* 2zc5_B* 2c6w_B 2c5w_B* Length = 390

 Score =  110 bits (276), Expect = 7e-25
 Identities = 57/354 (16%), Positives = 117/354 (33%), Gaps = 33/354 (9%)

Query: 256 IRLALDLRIQNIVHQELVENKKKYNAE---SVGTVILNVSTGEVISMVSIPDYDPHEAFK 312
           +   +D   Q  +      ++     +    V + +++VS G+VI+ +       + +F 
Sbjct: 35  VYTNVDQEAQKHLWDIYNSDQYVSYPDDDLQVASTVVDVSNGKVIAQLGARHQASNVSF- 93

Query: 313 GKKEGWFNRISYGIFEMGSIFKVFTIAM-GIDSGLFTVKDLFDTRNPIKV---GKHVIHD 368
                  N+      + GS  K  T     I+ G++          P         V + 
Sbjct: 94  -----GTNQAVETNRDWGSAMKPITDYAPAIEYGVYDSTATMVNDIPYNYPGTSTPVYNW 148

Query: 369 YHPQNRILTIPEIFRYSSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELPEIQAPSYP 428
                  +T+    + S N+ A +  + +G+   K FL  LG+                 
Sbjct: 149 DRAYFGNITLQYALQQSRNVTAVETLNKVGLDRAKTFLNGLGIDYP------------SM 196

Query: 429 SQWKRIHSLTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSRE------ESEKVS 482
                I S T         +  + A A AA  N G    P ++ +         E   V 
Sbjct: 197 HYANAISSNTTESNKQYGASSEKMAAAYAAFANGGIYHKPMYINKVVFSDGSKKEFSDVG 256

Query: 483 RIVLKKNTVKTMRSLLREGVTGGSGRRAFVPGFEVGGKTGTAQ--KVIKKRYSDTLNFNS 540
              +K+ T   M  +++  +  G+GR A++P     GKTGT+       +++     + +
Sbjct: 257 TRAMKETTAYMMTEMMKTVLAYGTGRGAYLPWLAQAGKTGTSNYTDDEIEKHIKNTGYVA 316

Query: 541 FLAVFPTTDPQYIVLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSASMLGVKP 594
              +F     +Y +  +               +  A +  ++I   +     + 
Sbjct: 317 PDEMFVGYTRKYSMAVWTGYSNRLTPIVGDGFLVAAKVYRSMITYLSEGSNPED 370