RPSBLAST alignment of GI: 254781103 and protein with PDBid: 3oc2

>3oc2_A Penicillin-binding protein 3; structu genomics, oxford protein production facility, OPPF, transpe cell WALL biosynthesis; 1.97A {Pseudomonas aeruginosa} PDB: 3ocl_A* 3ocn_A* Length = 564
 Score =  296 bits (758), Expect = 1e-80
 Identities = 144/521 (27%), Positives = 253/521 (48%), Gaps = 40/521 (7%)

Query: 98  IHPEPIAPSMNIDEYGMSRPDIIDRNGEILATDIPTFSLYVEPHKVISPDEIIEKLQIVL 157
           +    I            R  I DRNGE LA   P  +L+  P ++++  E   +L   L
Sbjct: 38  VRHIAIPAH---------RGLITDRNGEPLAVSTPVTTLWANPKELMTAKERWPQLAAAL 88

Query: 158 PNLDSEMIRRKL--SSETKFQWLRRKLSPQQQKRILSFGLPGVGFRLEKSRFYPAASHAS 215
              D+++   ++  ++E +F +L R L+P+Q + +++  +PGV    E  RFYPA    +
Sbjct: 89  -GQDTKLFADRIEQNAEREFIYLVRGLTPEQGEGVIALKVPGVYSIEEFRRFYPAGEVVA 147

Query: 216 HVVGYVDIDNRGITGIEKFLDMQ-----GLTRVFTTNKGE-----------KNLQPIRLA 259
           H VG+ D+D+RG  GIE   D       G  +V    +G            K  + + L+
Sbjct: 148 HAVGFTDVDDRGREGIELAFDEWLAGVPGKRQVLKDRRGRVIKDVQVTKNAKPGKTLALS 207

Query: 260 LDLRIQNIVHQELVENKKKYNAESVGTVILNVSTGEVISMVSIPDYDPHEAFKGKKEGWF 319
           +DLR+Q + H+EL     +  A++   VI++V TGE+++M + P Y+P+     +     
Sbjct: 208 IDLRLQYLAHRELRNALLENGAKAGSLVIMDVKTGEILAMTNQPTYNPNNRRNLQPAAMR 267

Query: 320 NRISYGIFEMGSIFKVFTIAMGIDSGLFTVKDLFDTRN-PIKVGKHVIHDYHPQNRILTI 378
           NR    +FE GS  K F+++  + SG +   D+ D     +++G++ I D    +R L +
Sbjct: 268 NRAMIDVFEPGSTVKPFSMSAALASGRWKPSDIVDVYPGTLQIGRYTIRDVSRNSRQLDL 327

Query: 379 PEIFRYSSNIGAAQIADAMGIQGHKEFLYRLGLLSKLETELPEIQAPSYP--SQWKRIHS 436
             I   SSN+G ++IA  +G +     + ++GL        P  +  + P   +W +  +
Sbjct: 328 TGILIKSSNVGISKIAFDIGAESIYSVMQQVGLGQDTGLGFPGERVGNLPNHRKWPKAET 387

Query: 437 LTISFGHGLSTTPLQTAVAAAALINEGRLIPPTFMIRSREESEKVSRIVLKKNTVKTMRS 496
            T+++G+GLS T +Q A A AAL N+G+ +P +     R +       V+      T++ 
Sbjct: 388 ATLAYGYGLSVTAIQLAHAYAALANDGKSVPLSMT---RVDRVPDGVQVISPEVASTVQG 444

Query: 497 LLREGV-TGGSGRRAFVPGFEVGGKTGTAQKVI--KKRYSDTLNFNSFLAVFPTTDPQYI 553
           +L++ V   G   RA VPG+   GK+GTA+KV    K Y +    + F    P TDP+  
Sbjct: 445 MLQQVVEAQGGVFRAQVPGYHAAGKSGTARKVSVGTKGYRENAYRSLFAGFAPATDPRIA 504

Query: 554 VLSFMDSPKIKERNQLTAGINVAPMVGNIIRRSASMLGVKP 594
           ++  +D P    +     G+  AP+   ++  +  ++ V P
Sbjct: 505 MVVVIDEPS---KAGYFGGLVSAPVFSKVMAGALRLMNVPP 542