HHsearch alignment for GI: 254781107 and conserved domain: cd03087
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=0 Score=670.98 Aligned_cols=423 Identities=25% Similarity=0.343 Sum_probs=348.5
Q ss_pred CCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHH
Q ss_conf 87674204505444178999999999975465488389996476786899999999999789879996789806507999
Q gi|254781107|r 16 PGTSGLRKKVSVFQQNSYTENFIQAIFNNVDCAEKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPAVS 95 (542)
Q Consensus 16 FGT~GiRG~~~~~~~~~~~~~~~~ai~~~~~~~~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP~~~ 95 (542)
T Consensus 2 FGt~GiRG~~~~~~t~~~~~~l~~a~~~~~~--~~~vvIg~D~R~~s~~~~~~~~~gl~~~G~~V~~~---g~~pTP~~~ 76 (439)
T cd03087 2 FGTSGIRGVVGEELTPELALKVGKALGTYLG--GGTVVVGRDTRTSGPMLKNAVIAGLLSAGCDVIDI---GIVPTPALQ 76 (439)
T ss_pred CCCCCCEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEC---CCCCHHHHH
T ss_conf 4888510037999899999999999998808--98599995898458999999999999779969995---888839999
Q ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHCCCCCEE
Q ss_conf 99985089817999576579898877735873687865786798899999974050001344468712103100257505
Q gi|254781107|r 96 HLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELANMTI 175 (542)
Q Consensus 96 ~av~~~~~~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (542)
T Consensus 77 ~~v~~~~-~~Gi~ITASHNP~~~N---GiK~~~~~G~~i~~~~~~~Ie~~~~~~------~~~~~~~~~~g~~------~ 140 (439)
T cd03087 77 YAVRKLG-DAGVMITASHNPPEYN---GIKLVNPDGTEFSREQEEEIEEIIFSE------RFRRVAWDEVGSV------R 140 (439)
T ss_pred HHHHHHC-CCEEEEEECCCCHHHC---EEEEECCCCCCCCHHHHHHHHHHHHCC------CCCCCCHHHCCCE------E
T ss_conf 9999718-8169999458971118---089856888567999999999998469------9876786445835------8
Q ss_pred EEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 89840222675433207803220013378469985035544012211123105850123320157875476446854222
Q gi|254781107|r 176 SVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLIH 255 (542)
Q Consensus 176 ~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~~~~~~~pd~~F~~~~PnP~~~~ 255 (542)
T Consensus 141 ~~~~~~~~Y~~~l~~~i~~~~-----~~~~kvvvD~~~G~~~~~~~~ll-~~lg~~v~~~-~~~~d~~fp~~~p~p~~~~ 213 (439)
T cd03087 141 REDSAIDEYIEAILDKVDIDG-----GKGLKVVVDCGNGAGSLTTPYLL-RELGCKVITL-NANPDGFFPGRPPEPTPEN 213 (439)
T ss_pred ECCHHHHHHHHHHHHHCCHHH-----CCCCEEEEECCCCCHHHHHHHHH-HHHCCCEEEE-CCCCCCCCCCCCCCCCHHH
T ss_conf 641279999999986458233-----27988999899870788999999-9819967998-4220897688799876889
Q ss_pred CCHHHHHHHCCCCCEEEEEECCCCCEEEEEC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCC
Q ss_conf 1047888612258607898648874568853-887227465999999999872020478716875310837999984047
Q gi|254781107|r 256 AKDLYDRMMMHDSADFGAACDGDGDRSMILG-KGIFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSAALDRVAEKL 334 (542)
Q Consensus 256 ~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd-~g~~i~~~d~l~ll~~~~~~~~~~~~~~~~vv~t~~sS~~i~~ia~~~ 334 (542)
T Consensus 214 l-~~~~~~v~~~~ad~gia~DgD~DR~~~vd~~G~~i~gd~i~~Lla~~ll~~~---~--~~vv~~v~ts~~~~~ia~~~ 287 (439)
T cd03087 214 L-SELMELVRATGADLGIAHDGDADRAVFVDEKGRFIDGDKLLALLAKYLLEEG---G--GKVVTPVDASMLVEDVVEEA 287 (439)
T ss_pred H-HHHHHHHHHCCCCEEEEECCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHC---C--CCEEEECCHHHHHHHHHHHH
T ss_conf 9-9999999843998799975987478998589759889999999999999768---9--98999463278999999981
Q ss_pred CEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEC-CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEE
Q ss_conf 6159982863266542102697388621123013-474215751678999999997246888999988998829661211
Q gi|254781107|r 335 NLKLFETPTGWKFFNNLLENGMITICGEESFGTG-SNHSREKDGIWSILFWLNILAVRGESLLDIVHKHWATYGRNYYSR 413 (542)
Q Consensus 335 g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~-~~~~~dkDgi~aal~~le~la~~gk~l~d~l~el~~~yG~~~~~~ 413 (542)
T Consensus 288 g~~~~~t~~G~k~i~~~~~~~~~~~g~E~sg~~~f~~~~~~~Dgi~a~~~~lel~~~-~~~Ls~~~~~~~~-~---~~~~ 362 (439)
T cd03087 288 GGEVIRTPVGDVHVAEEMIENGAVFGGEPNGGWIFPDHQLCRDGIMTAALLLELLAE-EKPLSELLDELPK-Y---PLLR 362 (439)
T ss_pred CCEEEECCCCCHHHHHHHHHHCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHC-CCCHHHHHHHHHH-H---CEEE
T ss_conf 986301156749999999850825998366788626867788699999999999983-8999999987476-4---6223
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCE
Q ss_conf 00136877899999999998775316521156420100000001134677374670899988991999975888878558
Q gi|254781107|r 414 YDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTENST 493 (542)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~~~i~~~dGik~~~~d~~wiliRpSGTEPk~~~ 493 (542)
T Consensus 363 ~~-i~~~~~~~~~~~~~l~~~~~~~~----------------------~~~~~iDGik~~~~dg-w~liRpSgTEp~--- 415 (439)
T cd03087 363 EK-VECPDEKKEEVMEAVEEELSDAD----------------------EDVDTIDGVRIEYEDG-WVLIRPSGTEPK--- 415 (439)
T ss_pred EE-EECCHHHHHHHHHHHHHHHHHCC----------------------CCCCCCCCEEEEECCE-EEEEECCCCCCE---
T ss_conf 78-98677769999999998623122----------------------6623565089983898-999981198126---
Q ss_pred EEEEEEECCCC
Q ss_conf 99999952899
Q gi|254781107|r 494 LRVYIDNYEPD 504 (542)
Q Consensus 494 iRiy~E~~~~~ 504 (542)
T Consensus 416 iriy~Ea~~~e 426 (439)
T cd03087 416 IRITAEAKTEE 426 (439)
T ss_pred EEEEEEECCHH
T ss_conf 89999849999