HHsearch alignment for GI: 254781107 and conserved domain: cd05802
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=0 Score=664.56 Aligned_cols=419 Identities=23% Similarity=0.313 Sum_probs=330.5
Q ss_pred CCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCC--CCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHH
Q ss_conf 876742045054441789999999999754654--883899964767868999999999997898799967898065079
Q gi|254781107|r 16 PGTSGLRKKVSVFQQNSYTENFIQAIFNNVDCA--EKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPA 93 (542)
Q Consensus 16 FGT~GiRG~~~~~~~~~~~~~~~~ai~~~~~~~--~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP~ 93 (542)
T Consensus 2 FGT~GiRG~~~~~lt~~~~~~ig~a~~~~~~~~~~~~~Vvvg~D~R~~s~~~~~~~~~gl~s~G~~V~~~---g~~pTP~ 78 (434)
T cd05802 2 FGTDGIRGVANEPLTPELALKLGRAAGKVLGKGGGRPKVLIGKDTRISGYMLESALAAGLTSAGVDVLLL---GVIPTPA 78 (434)
T ss_pred CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEC---CCCCHHH
T ss_conf 8999710036999999999999999999998469998699997999887999999999999869969991---8888599
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHCCCCC
Q ss_conf 99999850898179995765798988777358736878657867988999999740500013444687121031002575
Q gi|254781107|r 94 VSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELANM 173 (542)
Q Consensus 94 ~~~av~~~~~~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (542)
T Consensus 79 ~~~~v~~~~~~~Gi~ITASHNP~~~N---GiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~------~~~~~~~~------~ 143 (434)
T cd05802 79 VAYLTRKLRADAGVVISASHNPFEDN---GIKFFSSDGYKLPDEVEEEIEALIDKELEL------PPTGEKIG------R 143 (434)
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCCC---CEEEECCCCCCCCHHHHHHHHHHHHCCCCC------CCCCCCCC------C
T ss_conf 99999964998138963688974028---489634678757989999999998378765------68601376------1
Q ss_pred EEEEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 05898402226754332078032200133784699850355440122111231058501233201578754764468542
Q gi|254781107|r 174 TISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNL 253 (542)
Q Consensus 174 ~~~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~~~~~~~pd~~F~~~~PnP~~ 253 (542)
T Consensus 144 ~~~~~d~~~~Y~~~l~~~~~~~~~-----~~lkvvvD~~~Ga~~~~~~~il-~~lG~~v~~~-~~~pdg~~~n~--~~~~ 214 (434)
T cd05802 144 VYRIDDARGRYIEFLKSTFPKDLL-----SGLKIVLDCANGAAYKVAPEVF-RELGAEVIVI-NNAPDGLNINV--NCGS 214 (434)
T ss_pred EEECCCHHHHHHHHHHHHCCHHHH-----CCCEEEEECCCCCHHHHHHHHH-HHCCCCEEEE-CCCCCCCCCCC--CCCC
T ss_conf 688500699999999875881441-----5988999899861245699999-8729844774-25788776789--9898
Q ss_pred CCCCHHHHHHHCCCCCEEEEEECCCCCEEEEECC-CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHC
Q ss_conf 2210478886122586078986488745688538-872274659999999998720204787168753108379999840
Q gi|254781107|r 254 IHAKDLYDRMMMHDSADFGAACDGDGDRSMILGK-GIFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSAALDRVAE 332 (542)
Q Consensus 254 ~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd~-g~~i~~~d~l~ll~~~~~~~~~~~~~~~~vv~t~~sS~~i~~ia~ 332 (542)
T Consensus 215 ~~p~~l~-~~v~~~~aDlgia~DgD~DR~~~vd~~G~~i~~d~l~~l~a~~~l~~~~~~--~~~vv~tv~ss~~l~~~~~ 291 (434)
T cd05802 215 THPESLQ-KAVLENGADLGIAFDGDADRVIAVDEKGNIVDGDQILAICARDLKERGRLK--GNTVVGTVMSNLGLEKALK 291 (434)
T ss_pred CCHHHHH-HHHHHCCCCEEEEECCCCCEEEEECCCCCEECHHHHHHHHHHHHHHHCCCC--CCEEEEECCCCHHHHHHHH
T ss_conf 9979999-999855996788886998769999899978588999999999999850468--9879997344278999999
Q ss_pred CCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEE-CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEE
Q ss_conf 47615998286326654210269738862112301-34742157516789999999972468889999889988296612
Q gi|254781107|r 333 KLNLKLFETPTGWKFFNNLLENGMITICGEESFGT-GSNHSREKDGIWSILFWLNILAVRGESLLDIVHKHWATYGRNYY 411 (542)
Q Consensus 333 ~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~-~~~~~~dkDgi~aal~~le~la~~gk~l~d~l~el~~~yG~~~~ 411 (542)
T Consensus 292 ~~g~~~~~t~vG~k~i~~~m~~~~~~~ggE~sG~~~f~~~~~~~Dgi~aal~ile~l~~~~~~ls~l~~~~~~-y~~--- 367 (434)
T cd05802 292 ELGIKLVRTKVGDRYVLEEMLKHGANLGGEQSGHIIFLDHSTTGDGLLTALQLLAIMKRSGKSLSELASDMKL-YPQ--- 367 (434)
T ss_pred HCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH-CCC---
T ss_conf 7699899943724999999996697797415475774588868989999999999999839999999987544-102---
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCC
Q ss_conf 11001368778999999999987753165211564201000000011346773746708999889919999758888785
Q gi|254781107|r 412 SRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTEN 491 (542)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~~~i~~~dGik~~~~d~~wiliRpSGTEPk~ 491 (542)
T Consensus 368 ~~~~~~-~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~d~~wvlvRpSgTEP~- 413 (434)
T cd05802 368 VLVNVR-VKDKKALLENPRVQA--------------------------------AIAEAEKELGGEGRVLVRPSGTEPL- 413 (434)
T ss_pred EEECEE-CCCCCCHHHHHHHHH--------------------------------HHHHHHHHCCCCEEEEEECCCCCEE-
T ss_conf 014604-376421120288999--------------------------------9999998617977999981598416-
Q ss_pred CEEEEEEEECCCC
Q ss_conf 5899999952899
Q gi|254781107|r 492 STLRVYIDNYEPD 504 (542)
Q Consensus 492 ~~iRiy~E~~~~~ 504 (542)
T Consensus 414 --lriy~Ea~~~~ 424 (434)
T cd05802 414 --IRVMVEGEDEE 424 (434)
T ss_pred --EEEEEEECCHH
T ss_conf --89999769999