HHsearch results for GI: 254781107 and protein with PDBid: 1tuo_A
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00 E-value=0 Score=612.83 Aligned_cols=434 Identities=24% Similarity=0.357 Sum_probs=348.1
Q ss_pred CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCC-CCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 7888876742045054441789999999999754654-883899964767868999999999997898799967898065
Q gi|254781107|r 12 QDQKPGTSGLRKKVSVFQQNSYTENFIQAIFNNVDCA-EKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILS 90 (542)
Q Consensus 12 ~~l~FGT~GiRG~~~~~~~~~~~~~~~~ai~~~~~~~-~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~P 90 (542)
..++|||+||||+++..+++.++.++++++++.+... +++|+||||+|++|++++++++.+|.++|++|+.+ .|++|
T Consensus 10 ~~i~FGT~GiRG~~~~~lt~~~~~~~~~a~~~~l~~~~~~~VvVG~DtR~ss~~l~~a~~~gl~a~G~~V~~~--~G~~p 87 (464)
T 1tuo_A 10 APIRFGTEGFRGVIAREFTFATLHRLAEAYGRHLLERGGGLVVVGHDTRFLADAFARALSGHLAGMGLKVVLL--KGPVP 87 (464)
T ss_dssp CCCCCCSSSEEEEBTTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEECSSTTHHHHHHHHHHHHHHHTCEEEEE--SSSCC
T ss_pred CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEC--CCCCC
T ss_conf 7877408871412387659999999999999999872959899996996449999999999999769979987--89777
Q ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHCC
Q ss_conf 07999999850898179995765798988777358736878657867988999999740500013444687121031002
Q gi|254781107|r 91 TPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKEL 170 (542)
Q Consensus 91 TP~~~~av~~~~~~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (542)
||+++|+++++++++||||||||||++|| |+||++++|.++.++.++.|+..+..-. . .
T Consensus 88 TP~l~~~v~~~~~~~gi~itaSHnp~~~n---giK~~~~~g~~~~~~~~~~i~~~~~~~~---------~---------~ 146 (464)
T 1tuo_A 88 TPLLSFAVRHLKAAGGAMLTASHNPPQYL---GVKFKDATGGPIAQEEAKAIEALVPEEA---------R---------A 146 (464)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSCTTEE---EEEEEETTTEECCHHHHHHHHHTCCSCC---------C---------C
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCHHHC---CCEECCCCCCCCCHHHHHHHHHHHHHHH---------H---------H
T ss_conf 79999999836998448985689974755---6310344477676699999986311223---------2---------0
Q ss_pred CCCEEEEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEE-EEEECCCCCCCCCCCC
Q ss_conf 575058984022267543320780322001337846998503554401221112310585012-3320157875476446
Q gi|254781107|r 171 ANMTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTG-SVRNFIPLEDFGGCHP 249 (542)
Q Consensus 171 ~~~~~~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~-~~~~~~pd~~F~~~~P 249 (542)
........|..+.|.+.....++...++ ..++++++||+||+++.+++.+|. .++.... ...++.|++.|++++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~g~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~f~~~~~ 222 (464)
T 1tuo_A 147 LEGAYETLDLREAYFEALKAHLDLKALS---GFSGVLYHDSMGGAGAGFLKGFLR-HVGLEIPVRPIREEPHPLFHGVNP 222 (464)
T ss_dssp CCCCCEEECCHHHHHHHHHTTSCHHHHT---TCCSCEEEECTTSTTTTHHHHHHH-HTTCCCCEEEESCSCCTTGGGSCS
T ss_pred CCCCCEECCHHHHHHHHHHCCCCHHHHC---CCCEEEEECCCCCCCCHHHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 2686111131666665420133222202---466069603434542045689987-516543235511068899898888
Q ss_pred CCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEECC-CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHH
Q ss_conf 85422210478886122586078986488745688538-87227465999999999872020478716875310837999
Q gi|254781107|r 250 DPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMILGK-GIFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSAALD 328 (542)
Q Consensus 250 nP~~~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd~-g~~i~~~d~l~ll~~~~~~~~~~~~~~~~vv~t~~sS~~i~ 328 (542)
+|..+.+......++++.++|+|+++||||||++++++ |.++.+++++++++.++... .....++.++.+|..++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~adlgia~DgD~DR~~~vd~~g~~~~~d~i~~l~~~~~~~~----~~~~~~~~~~~~s~~~~ 298 (464)
T 1tuo_A 223 EPIPKNLGVTLAVLGPETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYRFRK----GHRGRAVKNFAVTWLLD 298 (464)
T ss_dssp CCSGGGCHHHHHHHTTCCTTCEEEEECTTSSBEEEEETTTEEECHHHHHHHHHHHHHHT----TCCSEEEEETTSCTHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEECCCEEECCHHHHHHHHHHHHHH----CCCCCCCCHHHHHHHHH
T ss_conf 96413379999998775176377776378855899928980887499999999999974----76886430012577878
Q ss_pred HHHCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEC-CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf 9840476159982863266542102697388621123013-474215751678999999997246888999988998829
Q gi|254781107|r 329 RVAEKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTG-SNHSREKDGIWSILFWLNILAVRGESLLDIVHKHWATYG 407 (542)
Q Consensus 329 ~ia~~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~-~~~~~dkDgi~aal~~le~la~~gk~l~d~l~el~~~yG 407 (542)
.+++++|.++++|+|||||+++.|.+.++.||||+|+|+. +.+.+++||++++++++++|+.++++|+|+++++++.|+
T Consensus 299 ~~~~~~g~~~~~t~~G~k~i~~~~~~~~~~~~~e~sg~~~~~~~~~~~D~i~~~l~il~~l~~~~~~l~~~~~~l~~~~~ 378 (464)
T 1tuo_A 299 RLGERLGFGVTTTPVGFKWIKEEFLKGDCFIGGEESGGVGYPEHLPERDGILTSLLLLESVAATGKDLAEQFKEVEALTG 378 (464)
T ss_dssp HHHHHHTCCEEEECSSHHHHHHHHTTTCEEEEECTTSBEEETTTEEEECHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHT
T ss_pred HHHHHHCCCEEEECCHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 99997087327733418999999860894896526587534752557742779999999999829999999999898728
Q ss_pred CCE-EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCC
Q ss_conf 661-2110013687789999999999877531652115642010000000113467737467089998899199997588
Q gi|254781107|r 408 RNY-YSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISG 486 (542)
Q Consensus 408 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~~~i~~~dGik~~~~d~~wiliRpSG 486 (542)
..+ +.+.+....... .+...+ . +..+. ......+.++||+|+.++|+ |+++||||
T Consensus 379 ~~~~~~~~~~~~~~~~----~~~~~~----~--~~~~~-------------~~~~~~i~~iDgv~~~~~~g-~~lvRpSG 434 (464)
T 1tuo_A 379 LTHAYDRLDLPLKAPL----DLTPFR----E--PRPLA-------------GLTPKGVDTLDGVKWLYEEA-WVLFRASG 434 (464)
T ss_dssp CCCEEEEEC-------------------------CCCT-------------TCCEEEEECSSSEEEEETTE-EEEEECC-
T ss_pred CCCCCEECCCCHHHHH----HHHHHH----C--CHHHC-------------CCCCCCEEECCEEEEECCCE-EEEEECCC
T ss_conf 7620100144222267----888642----4--05343-------------67633245045189982998-99998229
Q ss_pred CCCCCCEEEEEEEECCC
Q ss_conf 88785589999995289
Q gi|254781107|r 487 TDTENSTLRVYIDNYEP 503 (542)
Q Consensus 487 TEPk~~~iRiy~E~~~~ 503 (542)
|||+ ||||+|+.++
T Consensus 435 TEp~---vRvyaEa~~~ 448 (464)
T 1tuo_A 435 TEPV---VRIYVEAQSP 448 (464)
T ss_dssp -------CEEEEEESSH
T ss_pred CCCE---EEEEEEECCH
T ss_conf 8006---8999985999