Query gi|254781107|ref|YP_003065520.1| phosphoglucomutase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 542
No_of_seqs 157 out of 3541
Neff 7.5
Searched_HMMs 23785
Date Wed Jun 1 01:24:40 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781107.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pmg_A Alpha-D-glucose-1,6-bis 100.0 0 0 857.4 42.8 538 4-542 4-561 (561)
2 1kfi_A Phosphoglucomutase 1; p 100.0 0 0 854.9 42.6 531 4-542 9-572 (572)
3 2fuv_A Phosphoglucomutase; str 100.0 0 0 741.0 45.8 490 7-523 36-545 (549)
4 2z0f_A Putative phosphoglucomu 100.0 0 0 732.6 41.6 485 7-522 17-521 (524)
5 1wqa_A Phospho-sugar mutase; a 100.0 0 0 619.8 44.5 427 16-503 5-436 (455)
6 1p5d_X PMM, phosphomannomutase 100.0 0 0 615.9 38.0 436 15-520 13-452 (463)
7 1tuo_A Putative phosphomannomu 100.0 0 0 612.8 39.1 434 12-503 10-448 (464)
8 2f7l_A 455AA long hypothetical 100.0 0 0 576.9 45.8 448 13-520 3-452 (455)
9 3i3w_A Phosphoglucosamine muta 100.0 0 0 549.0 26.7 415 16-503 5-424 (443)
10 2dka_A Phosphoacetylglucosamin 100.0 0 0 473.3 15.2 439 34-520 4-543 (544)
11 1wjw_A Phosphoacetylglucosamin 98.8 1.2E-09 5.2E-14 79.9 3.0 48 466-520 46-93 (112)
12 2dka_A Phosphoacetylglucosamin 98.8 5.2E-09 2.2E-13 75.8 6.1 54 51-119 134-188 (544)
13 1rvg_A Fructose-1,6-bisphospha 78.3 2.8 0.00012 19.3 6.4 94 37-149 29-125 (305)
14 3fni_A Putative diflavin flavo 70.3 4.5 0.00019 18.0 6.9 62 48-112 3-65 (159)
15 1ccw_A Protein (glutamate muta 67.2 5.2 0.00022 17.6 7.2 61 49-115 3-66 (137)
16 2isw_A Putative fructose-1,6-b 66.4 5.3 0.00022 17.5 3.9 95 36-149 29-128 (323)
17 3n9r_A Fructose-bisphosphate a 55.8 8.2 0.00034 16.3 5.3 94 37-149 29-127 (307)
18 2yxb_A Coenzyme B12-dependent 50.2 10 0.00042 15.8 7.8 60 49-114 18-80 (161)
19 2i2x_B MTAC, methyltransferase 49.1 10 0.00044 15.7 7.8 17 375-391 229-245 (258)
20 3ne8_A N-acetylmuramoyl-L-alan 42.6 9 0.00038 16.1 1.7 12 203-214 3-14 (234)
21 1v95_A Nuclear receptor coacti 41.3 14 0.00058 14.9 4.4 71 52-132 14-85 (130)
22 1gvf_A Tagatose-bisphosphate a 37.7 16 0.00065 14.5 7.3 93 37-148 30-126 (286)
23 3mw8_A Uroporphyrinogen-III sy 30.7 20 0.00085 13.8 2.6 59 50-113 2-60 (240)
24 2fzv_A Putative arsenical resi 30.0 21 0.00087 13.7 5.7 25 279-304 124-149 (279)
25 2vvr_A Ribose-5-phosphate isom 29.0 21 0.0009 13.6 7.7 23 256-279 47-69 (149)
26 3nol_A Glutamine cyclotransfer 27.5 23 0.00096 13.5 2.4 18 107-126 33-50 (262)
27 2zki_A 199AA long hypothetical 26.8 23 0.00099 13.4 4.6 36 49-84 4-39 (199)
28 1o1x_A Ribose-5-phosphate isom 26.1 24 0.001 13.3 8.5 67 203-279 11-80 (155)
29 2q62_A ARSH; alpha/beta, flavo 24.6 26 0.0011 13.1 7.0 33 52-84 38-72 (247)
30 3nok_A Glutaminyl cyclase; bet 23.7 27 0.0011 13.0 2.3 18 106-125 44-61 (268)
31 3k7p_A Ribose 5-phosphate isom 22.9 28 0.0012 12.9 7.4 67 205-279 23-92 (179)
32 1pya_B Pyruvoyl-dependent hist 21.4 6.2 0.00026 17.1 -2.1 65 270-348 100-165 (229)
33 3mbr_X Glutamine cyclotransfer 20.9 30 0.0013 12.7 2.4 15 272-286 208-222 (243)
34 2v8h_A Beta-alanine synthase; 20.1 26 0.0011 13.1 0.8 29 510-538 429-457 (474)
No 1
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=100.00 E-value=0 Score=857.42 Aligned_cols=538 Identities=52% Similarity=0.901 Sum_probs=460.6
Q ss_pred EEEECCCCCCCCCCCCCCCEEECCC-CCHHHHHHHHHHHHHHCCC---CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf 3520787678888767420450544-4178999999999975465---48838999647678689999999999978987
Q gi|254781107|r 4 TIVPTVPYQDQKPGTSGLRKKVSVF-QQNSYTENFIQAIFNNVDC---AEKTLVVGGDGRFYNHIVIQKIIKIAAANGFA 79 (542)
Q Consensus 4 ~~~~~~~~~~l~FGT~GiRG~~~~~-~~~~~~~~~~~ai~~~~~~---~~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~ 79 (542)
..+++..|++||||||||||+++.+ .++.++.+++++++..+.. .+++|+||||+|++|++|+++++++|+++|++
T Consensus 4 ~~~~~~~~~~~~fGT~GiRG~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~VvIg~D~R~~S~~~a~~~a~~l~s~Gi~ 83 (561)
T 3pmg_A 4 VTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAANGIG 83 (561)
T ss_dssp EEEECCCCSCCCCBTTBEEEEHHHHHHSTTHHHHHHHHHHHTSCGGGTTTCEEEEEECCCTTHHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCE
T ss_conf 78478656889995876786158888897999999999999998733799879999789614899999999999987997
Q ss_pred EEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99967898065079999998508981799957657989887773587368786578679889999997405000134446
Q gi|254781107|r 80 RIIIGKGGILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEAND 159 (542)
Q Consensus 80 V~~~~~~gi~PTP~~~~av~~~~~~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~ 159 (542)
|+++...|++|||+++|+++++++++||||||||||++||.|||+|||+++|+|+.++.+++|++.++.+......+...
T Consensus 84 V~~~~~~g~~pTP~l~~av~~~~a~~GImITASHNP~~yn~~nGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~ 163 (561)
T 3pmg_A 84 RLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLK 163 (561)
T ss_dssp EEEEEEEEECCHHHHHHHHHHHTCSEEEEECCTTSCCSTTSEEEEEEEETTSSBCCHHHHHHHHHHHHHCCEEEECTTCC
T ss_pred EEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99958889758589999998649986899976689986676506995376776377778999999997334430366444
Q ss_pred CCHHHCCH------HCCCCCEEEEEEECHHHHHHHHHCCCCHHHHCC--CCCCCEEEEEECCCCCHHHHHHHHHHHCCCE
Q ss_conf 87121031------002575058984022267543320780322001--3378469985035544012211123105850
Q gi|254781107|r 160 VDINHIGT------KELANMTISVIDPIENYVALMENIFDFDAIRKL--LSFGFRIDIDCMNAVTGPYAKEILERKLGAP 231 (542)
Q Consensus 160 ~~~~~~~~------~~~~~~~~~~~d~~~~Y~~~l~~~~d~~~i~~~--~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~ 231 (542)
.++...+. .......++..|..+.|.+++.+.++++.++.. ...+++|++||+||+++.+++++|.+.+|+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~~~~~~~~~~~~~~lkIv~D~~nG~~~~~~~~iL~~~lg~~ 243 (561)
T 3pmg_A 164 VDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAP 243 (561)
T ss_dssp CCTTSCEEEEECCTTCSSCEEEEEECSSHHHHHHHHTTSCHHHHHHHHHSTTCCCEEEECTTSTTHHHHHHHHTTTTCCC
T ss_pred CCCCCCCCCCCCHHHCCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf 44000253013444404676079823099999999863487777776414678469995477611333365538761884
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEECC-CCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 12332015787547644685422210478886122586078986488745688538-87227465999999999872020
Q gi|254781107|r 232 TGSVRNFIPLEDFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMILGK-GIFVNPSDSLAIMVANAGLIPGY 310 (542)
Q Consensus 232 ~~~~~~~~pd~~F~~~~PnP~~~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd~-g~~i~~~d~l~ll~~~~~~~~~~ 310 (542)
+....|+.||++||+++|||+.+++.++. +.+++.++|+|+|+||||||++++|+ |.++.+++++++++.+++.....
T Consensus 244 ~~~~~~~~~d~~f~~~~p~p~~~~~~~l~-~~v~~~~aDlgia~DgDaDR~~ivd~~G~~i~~~~~~all~~~~l~~~~~ 322 (561)
T 3pmg_A 244 ANSAVNCVPLEDFGGHHPDPNLTYAADLV-ETMKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYF 322 (561)
T ss_dssp GGGEESCSCCTTGGGSCCCCSTTTTHHHH-HHHHTSCCSEEEEECTTSSCEEEEEGGGCBCCHHHHHHHHHHTGGGSHHH
T ss_pred CEEEEEEEECCCCCCCCCCCCCHHHHHHH-HHHHHCCCCEEEECCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHH
T ss_conf 20467645569988677899822499999-98860176445420588856899968972871651799999999973353
Q ss_pred -CCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf -4787168753108379999840476159982863266542102697388621123013474215751678999999997
Q gi|254781107|r 311 -ATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTGSNHSREKDGIWSILFWLNILA 389 (542)
Q Consensus 311 -~~~~~~vv~t~~sS~~i~~ia~~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~~~~~~dkDgi~aal~~le~la 389 (542)
......||+|++||.+++++++++|+++++|+||||||++.|.+.++.||||||+|++++|+++|||++++++++++++
T Consensus 323 ~~~~~~~vv~t~~ss~~i~~ia~~~g~~v~~t~tG~k~i~~~~~~~~~~~ggEesgg~~~~~~~~kDgi~a~l~~le~l~ 402 (561)
T 3pmg_A 323 QQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILA 402 (561)
T ss_dssp HHHCCCCEEEETTSCTHHHHHHHTSSSCEEEECSSHHHHHHHHHTTCCSEEEETTTEEEETTSSSCCHHHHHHHHHHHHH
T ss_pred HCCCCCEEEECCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 14887469866665807777898659369871774699999998459779885257262156899838999999999999
Q ss_pred HCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH--CCCCCCCC----CEEHHHHHHHCCCCCCCC
Q ss_conf 246888999988998829661211001368778999999999987753--16521156----420100000001134677
Q gi|254781107|r 390 VRGESLLDIVHKHWATYGRNYYSRYDYLGIPTEKAQDFMNDFRYRLKN--LIGSSFIG----QKIKQAGDFVYTDSTNGN 463 (542)
Q Consensus 390 ~~gk~l~d~l~el~~~yG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~----~~v~~~~d~~~~~~~~~~ 463 (542)
.++++|++++++++++||++++.+.+....+.+....++..++..+.+ ..+..+.. .++....++.+.+..+++
T Consensus 403 ~~~k~l~~~l~el~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 482 (561)
T 3pmg_A 403 TRKQSVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGS 482 (561)
T ss_dssp HHCSCHHHHHHHHHHHHCEEEEEEEEEEEECHHHHHHHHHHHHHHHHSTTSTTCEEEETTEEEEEEEEEECCEECTTTCC
T ss_pred HHCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCC
T ss_conf 83989999999888883875466314456778889999999998652133236400245431567651233345754576
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 3746708999889919999758888785589999995289978999999999999999999985066883789997579
Q gi|254781107|r 464 VSDKQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKHLKNTQEMLSDLVEVSQRISCLRHYIGHTNPSIAS 542 (542)
Q Consensus 464 i~~~dGik~~~~d~~wiliRpSGTEPk~~~iRiy~E~~~~~~~~~l~~~~~~l~~li~~~~~~~~~~~~~~~~~~~~~~ 542 (542)
++++||+|+.|+||+|+++|||||||..++||||+|+++++.++.+.+.++.++++++.++++.++++++|+++|||+|
T Consensus 483 i~~~dglk~~~~dg~wi~vRpSGTEP~~~~iRiY~Ea~~~d~a~~~~~~~~~l~~~i~~~~~~~~~~~~~g~~~~~~~~ 561 (561)
T 3pmg_A 483 VSKNQGLRLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 561 (561)
T ss_dssp EECCCCEEEEETTSCEEEEEEEECSSSCEEEEEEEEEEECCTTTTTSCHHHHHHHHHHHHHHHHTHHHHHCCSSCSEEC
T ss_pred CCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC
T ss_conf 6677759999779859999856788998129999987795588898999999999999999985868886889998619
No 2
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=100.00 E-value=0 Score=854.90 Aligned_cols=531 Identities=47% Similarity=0.840 Sum_probs=441.0
Q ss_pred EEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCC----CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCE
Q ss_conf 35207876788887674204505444178999999999975465----48838999647678689999999999978987
Q gi|254781107|r 4 TIVPTVPYQDQKPGTSGLRKKVSVFQQNSYTENFIQAIFNNVDC----AEKTLVVGGDGRFYNHIVIQKIIKIAAANGFA 79 (542)
Q Consensus 4 ~~~~~~~~~~l~FGT~GiRG~~~~~~~~~~~~~~~~ai~~~~~~----~~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~ 79 (542)
++.++.||.++|||||||||+++.++++.++.+|++|+++++.. .+++||||||+|++|++|+++++++|+++|++
T Consensus 9 ~~~~~~~~~~~KFGTsG~RG~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~VvIG~D~R~~S~~~a~~~a~~l~a~Gi~ 88 (572)
T 1kfi_A 9 RVQVTQPYAGQKPGTSGLRKKVSEATQPNYLENFVQSIFNTLRKDELKPKNVLFVGGDGRYFNRQAIFSIIRLAYANDIS 88 (572)
T ss_dssp EEEECCCCTTCCCBTTBEEEEHHHHTSTTHHHHHHHHHHHHSCGGGSSSSCEEEEEECCCTTHHHHHHHHHHHHHHTTCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCE
T ss_conf 32036868899998765670024004877899999999999776316789879998379856599999999999977997
Q ss_pred EEEECCCCCCCCHHHHHHHHHH-----CCCEEEEEECCCCCCCCC-CCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 9996789806507999999850-----898179995765798988-7773587368786578679889999997405000
Q gi|254781107|r 80 RIIIGKGGILSTPAVSHLIRKY-----KASGGIILTASHNPAGAT-QDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQ 153 (542)
Q Consensus 80 V~~~~~~gi~PTP~~~~av~~~-----~~~~GImITASHNP~eyN-~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~ 153 (542)
|++++++|++|||++||+++++ +|++||||||||||++|| .||||||++++|+++.++.+++|++.++++....
T Consensus 89 v~~~~~~G~~PTP~ls~av~~~~~~~~~a~~GImITASHNP~~~nynd~GiK~~~~~G~~~~~~~~~~I~~~~~~i~e~~ 168 (572)
T 1kfi_A 89 EVHVGQAGLMSTPASSHYIRKVNEEVGNCIGGIILTASHNPGGKEHGDFGIKFNVRTGAPAPEDFTDQIYTHTTKIKEYL 168 (572)
T ss_dssp EEEEEGGGCBCHHHHHHHHHHHHHHSCCEEEEEEECCTTSCCSTTTCEEEEEEECTTSSBCCHHHHHHHHHHHTTCCEEE
T ss_pred EEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99958999768789999999846554578738999448998876778726999858888088799999999999876543
Q ss_pred CCCC---CCCCHHHCCHH-------CCCCCEEEEEEECHHHHHHHHHCCCCHHHHCC-CCCCCEEEEEECCCCCHHHHHH
Q ss_conf 1344---46871210310-------02575058984022267543320780322001-3378469985035544012211
Q gi|254781107|r 154 IIEA---NDVDINHIGTK-------ELANMTISVIDPIENYVALMENIFDFDAIRKL-LSFGFRIDIDCMNAVTGPYAKE 222 (542)
Q Consensus 154 ~~~~---~~~~~~~~~~~-------~~~~~~~~~~d~~~~Y~~~l~~~~d~~~i~~~-~~~~l~IvvD~~nGa~~~~~~~ 222 (542)
..+. ...+++..+.. ......++++|.+..|++++.+.+|++.++.. ..+++||++||+||+++.++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~y~~~l~~~~d~~~i~~~~~~~~lkIv~d~~~Ga~~~~~~~ 248 (572)
T 1kfi_A 169 TVDYEFEKHINLDQIGVYKFEGTRLEKSHFEVKVVDTVQDYTQLMQKLFDFDLLKGLFSNKDFSFRFDGMHGVAGPYAKH 248 (572)
T ss_dssp ECCCCGGGTCCTTSCEEEEEEBCCTTCCEEEEEEECSSHHHHHHHHHHSCHHHHHHHHTCTTCCEEEECTTSTHHHHHHH
T ss_pred CCCCCCCCCCCHHHCCCCCCCCCHHCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHH
T ss_conf 04432233478444154334640010367606996338899999986358876530003578449997787631001799
Q ss_pred HHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH------CCCCCEEEEEECCCCCEEEEECCCCCCCCHHH
Q ss_conf 123105850123320157875476446854222104788861------22586078986488745688538872274659
Q gi|254781107|r 223 ILERKLGAPTGSVRNFIPLEDFGGCHPDPNLIHAKDLYDRMM------MHDSADFGAACDGDGDRSMILGKGIFVNPSDS 296 (542)
Q Consensus 223 il~~~lg~~~~~~~~~~pd~~F~~~~PnP~~~~~~~l~~~~~------~~~~aDlgiA~DgDaDR~~ivd~g~~i~~~d~ 296 (542)
+|++.++.....+.|++|||+||+++|||+.+++.+|...+. .+.++|+|+|+||||||++++|+.+.+.++|.
T Consensus 249 il~~lg~~~~~~~~~~~pd~~F~~~~p~P~~~~~~~l~~~~~~~~~~~~~~~aDlgiA~DgDaDR~~vvd~~g~~l~gd~ 328 (572)
T 1kfi_A 249 IFGTLLGCSKESLLNCDPSEDFGGGHPDPNLTYAHDLVELLDIHKKKDVGTVPQFGAACDGDADRNMILGRQFFVTPSDS 328 (572)
T ss_dssp HHTTTTCCCGGGEESCSCCTTGGGSCCCCSTTTTHHHHHHTTTTCCSCGGGSCSEEEEECTTSCBEEEEETTEEECHHHH
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEEECHHH
T ss_conf 99981899616776478799989888998865489999988766666521477602353686552000257877507889
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEECCCCCCCCC
Q ss_conf 99999999872020478716875310837999984047615998286326654210269738862112301347421575
Q gi|254781107|r 297 LAIMVANAGLIPGYATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTGSNHSREKD 376 (542)
Q Consensus 297 l~ll~~~~~~~~~~~~~~~~vv~t~~sS~~i~~ia~~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~~~~~~dkD 376 (542)
+++|+++++..+ ..+...||+|++||.+++++++++|+++++|+||||||++.|.+.++.||||||+|+..+|+++||
T Consensus 329 l~~Lla~~~~~~--~~~~~~vv~tv~sS~~l~~ia~~~G~~v~~t~vGfk~I~~~m~~~~~~~ggEeSgg~~~~~~~~kD 406 (572)
T 1kfi_A 329 LAVIAANANLIF--KNGLLGAARSMPTSGALDKVAAKNGIKLFETPTGWKFFGNLMDAGLINLCGEESFGTGSNHIREKD 406 (572)
T ss_dssp HHHHHHTHHHHS--TTCCCCEEEETTSCTHHHHHHHHHTCCEEEECSSTHHHHHHHHTTSCSEEEETTTEEEETTSSSCC
T ss_pred HHHHHHHHHHHH--HCCCCCEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC
T ss_conf 999999999975--336764541012307899999967983799588469999899718964001356676788888898
Q ss_pred CHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHH
Q ss_conf 16789999999972468------889999889988296612110013687789999999999877531652115642010
Q gi|254781107|r 377 GIWSILFWLNILAVRGE------SLLDIVHKHWATYGRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQ 450 (542)
Q Consensus 377 gi~aal~~le~la~~gk------~l~d~l~el~~~yG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~ 450 (542)
|+++++++++++++.++ +|+|++++++++||.+||.|.++...+.+....+++.++.++........ ..+
T Consensus 407 gi~a~l~~le~~a~~~~~~~~~~~l~e~l~~l~~~~G~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~-~~~--- 482 (572)
T 1kfi_A 407 GIWAVLAWLTILAHKNKNTDHFVTVEEIVTQYWQQFGRNYYSRYDYEQVDSAGANKMMEHLKTKFQYFEQLKQ-GNK--- 482 (572)
T ss_dssp HHHHHHHHHHHHHHHTSSCSSCCCHHHHHHHHHHHHCEEEEEEEEEEEECHHHHHHHHHHHHTTHHHHHTTST-TCE---
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCC---
T ss_conf 9999999999999968475433369999999999838670344110258878899999999863320344302-431---
Q ss_pred HHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00000011346773746708999889919999758888785589999995289978999999999999999999985066
Q gi|254781107|r 451 AGDFVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKHLKNTQEMLSDLVEVSQRISCLR 530 (542)
Q Consensus 451 ~~d~~~~~~~~~~i~~~dGik~~~~d~~wiliRpSGTEPk~~~iRiy~E~~~~~~~~~l~~~~~~l~~li~~~~~~~~~~ 530 (542)
...+.+.+..+..++++||+|+.|+||+|+++|||||||.+|.||||+|+.+++..+. ++++.++++++.++++++|+
T Consensus 483 ~~~~~~~~~~~~~i~~~DGlr~~~~dg~wilvRpSGTEP~~~kiRvY~Ea~~~~~~~~--~~~~~l~~li~~~~~l~~i~ 560 (572)
T 1kfi_A 483 ADIYDYVDPVDQSVSKNQGVRFVFGDGSRIIFRLSGTGSVGATIRIYFEQFEQQQIQH--ETATALANIIKLGLEISDIA 560 (572)
T ss_dssp EEECCEECTTTCCEECCCCEEEECTTSCEEEEEECSSCSSSEEEEEEEEEEESSCCCS--CHHHHHHHHHHHHHHHHCHH
T ss_pred CCHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCEEEEEEECCHHHHHH--HHHHHHHHHHHHHHHHHCHH
T ss_conf 0001103544574246774899966987999975799789983899998799899999--99999999999999986779
Q ss_pred HHHCCCCCCCCC
Q ss_conf 883789997579
Q gi|254781107|r 531 HYIGHTNPSIAS 542 (542)
Q Consensus 531 ~~~~~~~~~~~~ 542 (542)
+||||-+|+|+|
T Consensus 561 ~~~~~~~~~~~~ 572 (572)
T 1kfi_A 561 QFTGRNEPTVIT 572 (572)
T ss_dssp HHHCCSSCSEEC
T ss_pred HHHCCCCCCCCC
T ss_conf 886899997409
No 3
>2fuv_A Phosphoglucomutase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, isomerase; HET: MSE; 2.00A {Salmonella typhimurium LT2}
Probab=100.00 E-value=0 Score=741.04 Aligned_cols=490 Identities=25% Similarity=0.328 Sum_probs=400.5
Q ss_pred ECCCCCCCCCCCCCCCEEECCC-CCHHHHHHHHHHHHHHCCC--CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 0787678888767420450544-4178999999999975465--488389996476786899999999999789879996
Q gi|254781107|r 7 PTVPYQDQKPGTSGLRKKVSVF-QQNSYTENFIQAIFNNVDC--AEKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIII 83 (542)
Q Consensus 7 ~~~~~~~l~FGT~GiRG~~~~~-~~~~~~~~~~~ai~~~~~~--~~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~ 83 (542)
+++|.|.++|||+||||++|.. +++.++.++++++++.+.. .+++|+||||+|++|++|+++++.+|+++|++|+++
T Consensus 36 ~~~~~~~i~FGT~GiRG~~g~~~~t~~~~~~~~~a~~~~l~~~~~~~~VvIg~D~R~~s~~~~~~~~~gL~s~Gi~V~~~ 115 (549)
T 2fuv_A 36 AGNAEHAVKFGTSGHRGSAGRHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVLAANGVDVIVQ 115 (549)
T ss_dssp TTCGGGSCCCBTTBEEECGGGTSSSHHHHHHHHHHHHHHHHHTTCCSCEEEEECSCTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 88866666867987675669998899999999999999998639998099997896158999999999999779979995
Q ss_pred CCCCCCCCHHHHHHHHHHCC-----CEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 78980650799999985089-----8179995765798988777358736878657867988999999740500013444
Q gi|254781107|r 84 GKGGILSTPAVSHLIRKYKA-----SGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEAN 158 (542)
Q Consensus 84 ~~~gi~PTP~~~~av~~~~~-----~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~ 158 (542)
.+.|++|||+++|+++++++ ++||||||||||++|| |||||+++|+++.++.++.|++.++...........
T Consensus 116 ~~~G~~pTP~~~~av~~~~~~~~~~~~GimITASHNP~~~N---GiK~~~~~G~~l~~~~~~~Ie~~~~~~~~~~~~~~~ 192 (549)
T 2fuv_A 116 ENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDG---GIKYNPPNGGPADTNVTKVVEDRANALLAGGLQGVK 192 (549)
T ss_dssp GGGCCCCHHHHHHHHHHHHHTCSSCCEEEEECCTTCCTTCE---EEEEECTTSSCCCHHHHHHHHHHHHHHHHTTTTTCC
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCC---CEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 88883680899999999601367734259996478983227---667634898646457899999999765320233343
Q ss_pred CCCHHHCCHHCCCCCEEEEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 68712103100257505898402226754332078032200133784699850355440122111231058501233201
Q gi|254781107|r 159 DVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNF 238 (542)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~~~~~~ 238 (542)
..++... .....+...|..+.|++++.+.++.+.+++ ++++|++||+||+++.+++++| +.+|+.+..+ ++
T Consensus 193 ~~~~~~~----~~~~~i~~~d~~~~Y~~~l~~~i~~~~i~~---~~lkIvvD~~nG~~~~~~~~il-~~lg~~~~~~-~~ 263 (549)
T 2fuv_A 193 RISLDAA----MASGHVKAVDLVQPFVEGLADIVDMAAIQK---AGLTLGVDPLGGSGIEYWKRIA-EHYKLNLTLV-ND 263 (549)
T ss_dssp CCCHHHH----HHTSCEEEECCHHHHHHHGGGTSCHHHHHH---HTCCEEEECTTCTTHHHHHHHH-HHTTCCEEES-CC
T ss_pred CCCCCCC----CCCCEEEECCHHHHHHHHHHHHHCCHHHHC---CCCEEEEECCCCCCCCCCCHHH-HHCCCCCCCC-CC
T ss_conf 3442111----357706742118899999988714022422---6976998457765355661243-3216642112-22
Q ss_pred CCCCCCCCCCCCCCCC------CCCHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 5787547644685422------2104788861225860789864887456885388722746599999999987202047
Q gi|254781107|r 239 IPLEDFGGCHPDPNLI------HAKDLYDRMMMHDSADFGAACDGDGDRSMILGKGIFVNPSDSLAIMVANAGLIPGYAT 312 (542)
Q Consensus 239 ~pd~~F~~~~PnP~~~------~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd~g~~i~~~d~l~ll~~~~~~~~~~~~ 312 (542)
.++++|+.++|+|... ....+..+++.+.++|+|+|+||||||++++|+++.+.+++++++++.|++..+...+
T Consensus 264 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adlgia~DgDaDR~~ivd~~g~v~~~~~~~ll~~~l~~~~~~~~ 343 (549)
T 2fuv_A 264 QVDQTFRFMHLDKDGAIRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQHRPLWG 343 (549)
T ss_dssp CCCTTCTTSBCCTTSCCCCCTTCTTTTHHHHTTGGGCSEEEECCTTSCBCEEEETTEECCHHHHHHHHHHHHHHSCTTSC
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 34566898899996444433156899999876513605999986998768999689842587155899999997151148
Q ss_pred CCCEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEC------CCCCCCCCCHHHHHHHHH
Q ss_conf 87168753108379999840476159982863266542102697388621123013------474215751678999999
Q gi|254781107|r 313 GLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTG------SNHSREKDGIWSILFWLN 386 (542)
Q Consensus 313 ~~~~vv~t~~sS~~i~~ia~~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~------~~~~~dkDgi~aal~~le 386 (542)
....|++|++||.+++++++++|+++++|+||||||++.|.+.+++||||||+|+. ..|++||||+++++++++
T Consensus 344 ~~~~vv~tv~ss~~~~~ia~~~g~~v~~t~vG~k~i~~~m~~~~~~~ggEeSgg~~~~~~~~~~~~~~kDgi~a~l~ile 423 (549)
T 2fuv_A 344 KDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAE 423 (549)
T ss_dssp TTCEEEEETTSCTHHHHHHHHHTCCEEEECSSGGGGHHHHHHTSEEEEEETTTEEEECCTTSSCSCSSCCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 77300356556278899999739810125650899999875058516897048767424666531267369999999999
Q ss_pred HHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCC
Q ss_conf 99724688899998899882966121100136877899999999998775316521156420100000001134677374
Q gi|254781107|r 387 ILAVRGESLLDIVHKHWATYGRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGNVSD 466 (542)
Q Consensus 387 ~la~~gk~l~d~l~el~~~yG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~~~i~~ 466 (542)
+++.+++++++++++|+++||.++|.+.+......++ ..+..+.. .......+.+.++... .+..++++.+
T Consensus 424 ~la~~~~~l~~ll~el~~~~g~~~~~~~~~~~~~~~k--~~~~~~~~--~~~~~~~~~~~~i~~~-----~~~~~~~~~~ 494 (549)
T 2fuv_A 424 ITAVTGKNPQEHYNELAARFGAPSYNRLQASATSAQK--AALSKLSP--EMVSASTLAGDPITAR-----LTAAPGNGAS 494 (549)
T ss_dssp HHHHHSSCHHHHHHHHHHHHCCCEEEEEEEECCHHHH--HHHHTCCG--GGCCCCEETTEECCEE-----EEECTTTCCE
T ss_pred HHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHH--HHHHHHHH--HHCCCCHHCCCCEEEE-----EECCCCCCCC
T ss_conf 9998596999999999999689976066044676789--99998667--6425410147621688-----7316676556
Q ss_pred CCEEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 670899988991999975888878558999999528997899999999999999999
Q gi|254781107|r 467 KQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKHLKNTQEMLSDLVEVS 523 (542)
Q Consensus 467 ~dGik~~~~d~~wiliRpSGTEPk~~~iRiy~E~~~~~~~~~l~~~~~~l~~li~~~ 523 (542)
+||+|+.++|+ |+++|||||||+ ||||+|+.+. ++.++.+++.+.++++.+
T Consensus 495 idGlki~~~~g-w~lvRpSGTEP~---iRvy~Ea~~~--~e~~~~l~~~~~~~i~~~ 545 (549)
T 2fuv_A 495 IGGLKVMTDNG-WFAARPSGTEDA---YKIYCESFLG--EEHRKQIEKEAVEIVSEV 545 (549)
T ss_dssp EEEEEEECSSE-EEEEEECSSSSE---EEEEEEESSC--HHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCE-EEEEECCCCCEE---EEEEEEECCC--HHHHHHHHHHHHHHHHHH
T ss_conf 66279984998-999985798056---9999983785--899999999999999999
No 4
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics, NPPSFA; 2.52A {Thermus thermophilus HB8}
Probab=100.00 E-value=0 Score=732.59 Aligned_cols=485 Identities=27% Similarity=0.341 Sum_probs=396.4
Q ss_pred ECCCCCCCCCCCCCCCEEE-CCCCCHHHHHHHHHHHHHHCCC--CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 0787678888767420450-5444178999999999975465--488389996476786899999999999789879996
Q gi|254781107|r 7 PTVPYQDQKPGTSGLRKKV-SVFQQNSYTENFIQAIFNNVDC--AEKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIII 83 (542)
Q Consensus 7 ~~~~~~~l~FGT~GiRG~~-~~~~~~~~~~~~~~ai~~~~~~--~~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~ 83 (542)
|++|.++++|||+||||++ +..++..++..+++++++.+.. .+++||||||+|++|++|+++++.+|+++|++|+++
T Consensus 17 ~~~~~~~~~FGT~GiRG~~~~~~~t~~~v~~i~~a~~~~~~~~~~~~~VvIG~D~R~~s~~~a~~~~~~l~~~Gi~V~~~ 96 (524)
T 2z0f_A 17 PQNPLEGVRFGTSGHRGSSLKATFTEAHVLAIAQAIAELRPSFGATGPLFLAKDTHALSEPAWATALSVFAAHGIEVRVE 96 (524)
T ss_dssp TTCGGGSCCEETTEEEECGGGTSSCHHHHHHHHHHHHHHTTTTTCCSCEEEEECSCTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 89845588768841258778889899999999999999999659997399997997068999999999999779989993
Q ss_pred CCCCCCCCHHHHHHHHHHCC-----CEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 78980650799999985089-----8179995765798988777358736878657867988999999740500013444
Q gi|254781107|r 84 GKGGILSTPAVSHLIRKYKA-----SGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEAN 158 (542)
Q Consensus 84 ~~~gi~PTP~~~~av~~~~~-----~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~ 158 (542)
.+.|++|||+++|+++++++ ++||||||||||++|| |||+|+++|+|+.++.++.|++.++.+.........
T Consensus 97 ~~~g~~pTP~~~~av~~~~~~~~~~~~GImITASHNP~~~N---GiK~~~~~G~~~~~~~~~~Ie~~~~~~~~~~~~~~~ 173 (524)
T 2z0f_A 97 ADGDYTPTPLVSLAILEHNAHHEAKADGVLLTPSHNPPEDG---GFKYNPPTGGPANARITRAIEERANALLQEGLKGVK 173 (524)
T ss_dssp SSSSCCCHHHHHHHHHHHHTTCSSCCEEEEECC--CCTTCE---EEEEECTTSSCCCHHHHHHHHHHHHHHHHTTTTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC---CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 89982376689999998410124667159995478985448---657624898736605789999999987653003466
Q ss_pred CCCHHHCCHHCCCCCEEEEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 68712103100257505898402226754332078032200133784699850355440122111231058501233201
Q gi|254781107|r 159 DVDINHIGTKELANMTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNF 238 (542)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~~~~~~ 238 (542)
..++.... ......|..+.|++.+.+.++.+.++. ++++|++||+||+++.+++++| +.+|+++..+ ++
T Consensus 174 ~~~~~~~~------~~~~~~d~~~~Y~~~l~~~i~~~~~~~---~~~kIvvD~~~G~~~~~~~~ll-~~lG~~v~~i-~~ 242 (524)
T 2z0f_A 174 RLPLREAL------ARAKPFDYAGLYVEKVAEAVDLEAIRA---SGLRIGVDPLGGASLRVWERLA-ESHGLPLEVV-NP 242 (524)
T ss_dssp CCCHHHHH------HHCEEECHHHHHHHHGGGTSCHHHHHH---SCCCEEEECTTSTTHHHHHHHH-HHHTCCEEEC---
T ss_pred CCCCCCCC------CCEEEECHHHHHHHHHHHCCCCHHCCC---CCCEEEEECCCCCCHHHHHHHH-HHHCCCEEEE-CC
T ss_conf 57731125------521561128889986540146100135---6877999679884134567788-8728821575-67
Q ss_pred CCCCCCCCCCCCCC------CCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 57875476446854------222104788861225860789864887456885388722746599999999987202047
Q gi|254781107|r 239 IPLEDFGGCHPDPN------LIHAKDLYDRMMMHDSADFGAACDGDGDRSMILGKGIFVNPSDSLAIMVANAGLIPGYAT 312 (542)
Q Consensus 239 ~pd~~F~~~~PnP~------~~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd~g~~i~~~d~l~ll~~~~~~~~~~~~ 312 (542)
.++++|+..+|+|. ......+..+++.++++|+|+|+||||||++++++.+.+.++|.+++++++++..+..+
T Consensus 243 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adlgia~DgDaDR~~~vd~~G~~~~~~~l~~l~~~~~~~~~~~- 321 (524)
T 2z0f_A 243 TLDPTFRFMPKDHDGKIRMDCSSPYAMAGLLALKDRFDLAIGNDPDADRHGIVTPRGLMNPNHYLAAALHHLYTTRSWP- 321 (524)
T ss_dssp -----------------------------CCCCCCCSSEEEEECTTSCSEEEEETTEECCHHHHHHHHHHHHHTTCCCT-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCEECCHHHHHHHHHHHHHHCCC-
T ss_conf 2578778777444354478875156789998776401441687488876999918996622168999999998750368-
Q ss_pred CCCEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEC------CCCCCCCCCHHHHHHHHH
Q ss_conf 87168753108379999840476159982863266542102697388621123013------474215751678999999
Q gi|254781107|r 313 GLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTG------SNHSREKDGIWSILFWLN 386 (542)
Q Consensus 313 ~~~~vv~t~~sS~~i~~ia~~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~------~~~~~dkDgi~aal~~le 386 (542)
...|++|++||.+++++++++|+++++|+||||||++.|.+.++.||||||+|+. ..|++||||++++++++|
T Consensus 322 -~~~vv~t~~ss~~~~~ia~~~G~~v~~t~vG~k~i~~~~~e~~~~~ggEesgg~~~~~~~~~~~~~d~Dgi~a~l~~le 400 (524)
T 2z0f_A 322 -GAKVGKTAVTSALLDRVAQALGREVYETPVGFKHFVAGLLEGWLGFAGEESAGASFLRFDGRPFSTDKDGILMGLLAAE 400 (524)
T ss_dssp -TCEEEEETTSCTHHHHHHHHTTCCEEEECSSTHHHHHHHHHSSEEEEEETTTEEEECCTTSCCSCSSCCHHHHHHHHHH
T ss_pred -CCEEEEEECCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf -7727886312228899999679879982563599999876510355444456278624555441567226899999999
Q ss_pred HHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCC
Q ss_conf 99724688899998899882966121100136877899999999998775316521156420100000001134677374
Q gi|254781107|r 387 ILAVRGESLLDIVHKHWATYGRNYYSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGNVSD 466 (542)
Q Consensus 387 ~la~~gk~l~d~l~el~~~yG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~~~i~~ 466 (542)
+++++++++++++++|+++||.+|+.+.+....+..+.. +. +...+...+.++.+.++.+..|+. .+...+
T Consensus 401 ~~a~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~k~~--~~--~~~~~~~~~~~~~~~~v~~~~d~~-----~~~~~~ 471 (524)
T 2z0f_A 401 LMAKRGQAPDALYEALAEKLGRPYYARKDLPVSPEAKAR--LA--RLSAKEVHPSTLAGEPVLQVLDRA-----TGNGEP 471 (524)
T ss_dssp HHHHHSSCHHHHHHHHHHHHCCCEEEEEEEECCHHHHHH--HT--TCCTTTSCCSEETTEECCEEEEEC-----TTTCCE
T ss_pred HHHHHCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHH--HH--HHHHHHCCCHHHCCCCEEEEEECC-----CCCCCC
T ss_conf 999839999999999999867674053141359899999--99--855320570454576136787304-----576666
Q ss_pred CCEEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 67089998899199997588887855899999952899789999999999999999
Q gi|254781107|r 467 KQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKHLKNTQEMLSDLVEV 522 (542)
Q Consensus 467 ~dGik~~~~d~~wiliRpSGTEPk~~~iRiy~E~~~~~~~~~l~~~~~~l~~li~~ 522 (542)
+||+|+.++|+ |++||||||||| ||||+|+.+. ++.++++.+.++++++.
T Consensus 472 idGik~~~~~g-w~lvRpSGTEP~---irvy~Ea~~~--e~~~~~l~~~~~~~i~~ 521 (524)
T 2z0f_A 472 LGGIKVVAANA-WFAVRPSGTEDV---AKVYAESFLG--EAHLERVLEEATALLHK 521 (524)
T ss_dssp EEEEEEECSSE-EEEEEECSSSSE---EEEEEEESSC--HHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCE-EEEEECCCCCEE---EEEEEEECCC--HHHHHHHHHHHHHHHHH
T ss_conf 67879982998-999984798136---9999985688--99999999999999999
No 5
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal complex, isomerase; 2.00A {Pyrococcus horikoshii}
Probab=100.00 E-value=0 Score=619.82 Aligned_cols=427 Identities=24% Similarity=0.314 Sum_probs=346.9
Q ss_pred CCCCCCCEEECCCCCHHHHHHHHHHHHHHCC---CCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCH
Q ss_conf 8767420450544417899999999997546---5488389996476786899999999999789879996789806507
Q gi|254781107|r 16 PGTSGLRKKVSVFQQNSYTENFIQAIFNNVD---CAEKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTP 92 (542)
Q Consensus 16 FGT~GiRG~~~~~~~~~~~~~~~~ai~~~~~---~~~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP 92 (542)
|||+||||+++..+++.++.+++++++..+. ..+++|+||||+|++|++|+++++++|.++|++|+.+ |++|||
T Consensus 5 FGt~GiRG~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~VviG~D~R~ss~~l~~~~~~~l~~~G~~v~~~---g~~~TP 81 (455)
T 1wqa_A 5 FGTFGVRGIANEKITPEFAMKIGMAFGTLLKREGRKKPLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDV---GIAPTP 81 (455)
T ss_dssp CBTTBEEEEBTTTBCHHHHHHHHHHHHHHHHHTTCSSCEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEEE---EECCHH
T ss_pred CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEC---CCCCHH
T ss_conf 68668012518988899999999999999997189999899998997369999999999999869969982---878869
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHCCCC
Q ss_conf 99999985089817999576579898877735873687865786798899999974050001344468712103100257
Q gi|254781107|r 93 AVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELAN 172 (542)
Q Consensus 93 ~~~~av~~~~~~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (542)
+++|+++++++++||||||||||++|| |+|+|+.+|.++.+..++.|+........ .......+
T Consensus 82 ~l~~~v~~~~~~~Gi~iTaShnp~~~n---G~K~~~~~g~~~~~~~~~~ie~~~~~~~~------~~~~~~~~------- 145 (455)
T 1wqa_A 82 AVQWATKHFNADGGAVITASHNPPEYN---GIKLLEPNGMGLKKEREAIVEELFFKEDF------DRAKWYEI------- 145 (455)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSCTTEE---EEEEECTTSSBCCHHHHHHHHHHHHHTCC------CCCCGGGC-------
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCC---CEEEECCCCCCCCCHHHHHHHHHHHHCCC------CCCCCCCC-------
T ss_conf 999999972988743787347986568---65975466876651388898888751242------22344455-------
Q ss_pred CEEEEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 50589840222675433207803220013378469985035544012211123105850123320157875476446854
Q gi|254781107|r 173 MTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPN 252 (542)
Q Consensus 173 ~~~~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~~~~~~~pd~~F~~~~PnP~ 252 (542)
..+...|..+.|++.+...++...++. .+++|++||+||+++.+++++|+ .+|+.++.+ ++.||++||++.|+|.
T Consensus 146 ~~~~~~~~~~~Y~~~~~~~~~~~~~~~---~~~~iv~d~~~G~~~~~~~~ll~-~lg~~v~~~-~~~~d~~~~~~~~~~~ 220 (455)
T 1wqa_A 146 GEVRREDIIKPYIEAIKSKVDVEAIKK---RKPFVVVDTSNGAGSLTLPYLLR-ELGCKVITV-NAQPDGYFPARNPEPN 220 (455)
T ss_dssp CCEEECCCHHHHHHHHHTTSCHHHHHH---HCCEEEEECTTSGGGGTHHHHHH-HHTCEEEEE-SCSCCTTCSSSCSCCC
T ss_pred CCEEECCHHHHHHHHHHHHCCHHHHHC---CCCEEEEECCCCCHHHHHHHHHH-HCCCCEEEE-CCCCCCCCCCCCCCCC
T ss_conf 604634158999999986335444413---57627995478868999999999-729957996-1358998888999875
Q ss_pred CCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEECC-CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHH
Q ss_conf 22210478886122586078986488745688538-87227465999999999872020478716875310837999984
Q gi|254781107|r 253 LIHAKDLYDRMMMHDSADFGAACDGDGDRSMILGK-GIFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSAALDRVA 331 (542)
Q Consensus 253 ~~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd~-g~~i~~~d~l~ll~~~~~~~~~~~~~~~~vv~t~~sS~~i~~ia 331 (542)
.+.... ..+++.+.++|+|+++||||||++++|+ |.++.++++..+++.++... .....++++++||.+++.++
T Consensus 221 ~~~~~~-~~~~~~~~~ad~g~a~D~DgDR~~~~d~~g~~~~~~~~~~l~~~~~~~~----~~~~~v~~~~~~s~~~~~~~ 295 (455)
T 1wqa_A 221 EENLKE-FMEIVKALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKE----KGGGLLVTTVATSNLLDDIA 295 (455)
T ss_dssp TTTTHH-HHHHHHHHTCSEEEEECTTSCCEEEEETTSCBCCHHHHHHHHHHHHHHH----HTSCEEEEETTSCTHHHHHH
T ss_pred CHHHHH-HHHHHHHHCCCEEEEECCCCCEEEEEECCCCEEECCHHHHHHHHHHHHH----CCCCCCCCCCCCCHHHHHHH
T ss_conf 223999-9999862245167788599987999954696771527999999999975----57998433631107999999
Q ss_pred CCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEC-CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCE
Q ss_conf 0476159982863266542102697388621123013-474215751678999999997246888999988998829661
Q gi|254781107|r 332 EKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTG-SNHSREKDGIWSILFWLNILAVRGESLLDIVHKHWATYGRNY 410 (542)
Q Consensus 332 ~~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~-~~~~~dkDgi~aal~~le~la~~gk~l~d~l~el~~~yG~~~ 410 (542)
+++|+++++|+|||||+.+.|.+.++.||||+|+|+. +.+.+++||++++++++++++.++++++++++++++ +
T Consensus 296 ~~~g~~~~~~~tG~k~i~~~~~~~~~~~g~E~sg~~~~~~~~~~~D~~~a~~~~le~~~~~~~~l~~~~~~l~~-----~ 370 (455)
T 1wqa_A 296 KKHGAKVMRTKVGDLIVARALYENNGTIGGEENGGVIFPEHVLGRDGAMTVAKVVEIFAKSGKKFSELIDELPK-----Y 370 (455)
T ss_dssp HHTTCEEEEECSSTTHHHHHHHHTTCSEEEETTEEEECTTTCSSCCHHHHHHHHHHHHHHHCSCHHHHHHTSCC-----C
T ss_pred HHCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH-----H
T ss_conf 97298467604618999999982597799844468035321136730689999999776649987899998777-----4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCC
Q ss_conf 21100136877899999999998775316521156420100000001134677374670899988991999975888878
Q gi|254781107|r 411 YSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTE 490 (542)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~~~i~~~dGik~~~~d~~wiliRpSGTEPk 490 (542)
|.......++.++. .+++++.+..+.. ...+.++||+|+.++|| |+++|||||||+
T Consensus 371 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------------------~~~~~~~Dgik~~~~~g-~~~iRpSGTEp~ 426 (455)
T 1wqa_A 371 YQIKTKRHVEGDRH-AIVNKVAEMARER----------------------GYTVDTTDGAKIIFEDG-WVLVRASGTEPI 426 (455)
T ss_dssp EEEEECCBCCSSHH-HHHHHHHHHHHHT----------------------TCEEECTTSEEEECSSC-EEEECCCSSSSB
T ss_pred CCCCCEEECCCCHH-HHHHHHHHHHHHC----------------------CCCCCCCCEEEEECCCE-EEEEEECCCCCE
T ss_conf 06561013343189-9999999987633----------------------78623456389980987-999980198117
Q ss_pred CCEEEEEEEECCC
Q ss_conf 5589999995289
Q gi|254781107|r 491 NSTLRVYIDNYEP 503 (542)
Q Consensus 491 ~~~iRiy~E~~~~ 503 (542)
||||+|+.++
T Consensus 427 ---irvY~Ea~~~ 436 (455)
T 1wqa_A 427 ---IRIFSEAKSK 436 (455)
T ss_dssp ---CCEEEEESSH
T ss_pred ---EEEEEEECCH
T ss_conf ---9999997999
No 6
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme-ligand complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3bkq_X* 3c04_A* 2fkm_X*
Probab=100.00 E-value=0 Score=615.87 Aligned_cols=436 Identities=18% Similarity=0.207 Sum_probs=344.5
Q ss_pred CCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCC-CCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHH
Q ss_conf 8876742045054441789999999999754654-883899964767868999999999997898799967898065079
Q gi|254781107|r 15 KPGTSGLRKKVSVFQQNSYTENFIQAIFNNVDCA-EKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPA 93 (542)
Q Consensus 15 ~FGT~GiRG~~~~~~~~~~~~~~~~ai~~~~~~~-~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP~ 93 (542)
-||+.||||++|...++.++.++++|++...... .++|+||||+|++|++|+++++++|+++|++|+.+ |++|||+
T Consensus 13 if~~~~IRG~~~~~it~e~~~~l~~A~~~~~~~~~~~~VvVG~D~R~~s~~~~~~~~~gL~s~Gi~V~~~---g~~pTP~ 89 (463)
T 1p5d_X 13 IFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDV---GMVPTPV 89 (463)
T ss_dssp GBCSSSEEEEBTTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEECSCTTHHHHHHHHHHHHHTBTCEEEEE---EECCHHH
T ss_pred HCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEC---CCCCHHH
T ss_conf 7455564025489859999999999999999876999899997997259999999999999869969990---8787899
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHCCCCC
Q ss_conf 99999850898179995765798988777358736878657867988999999740500013444687121031002575
Q gi|254781107|r 94 VSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELANM 173 (542)
Q Consensus 94 ~~~av~~~~~~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (542)
++|+++++++++||||||||||++|| |+|+++..|.+..+..+..+....+..... ..+
T Consensus 90 l~~~v~~~~a~gGI~ITaSHnp~~~n---G~K~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~ 148 (463)
T 1p5d_X 90 LYYAANVLEGKSGVMLTGSHNPPDYN---GFKIVVAGETLANEQIQALRERIEKNDLAS------------------GVG 148 (463)
T ss_dssp HHHHHHHSSCSEEEEECCTTSCTTEE---EEEEEETTEECCTHHHHHHHHHHHHTCCCC------------------BCC
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHCCHHH------------------CCC
T ss_conf 99999971998169996789974345---753100246556267888787665042021------------------267
Q ss_pred EEEEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 05898402226754332078032200133784699850355440122111231058501233201578754764468542
Q gi|254781107|r 174 TISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNL 253 (542)
Q Consensus 174 ~~~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~~~~~~~pd~~F~~~~PnP~~ 253 (542)
..+..+....|..++.+.+. ..++++|++||+||+++.+++++| +.||+.++.+ ++.|||+||++.|||+.
T Consensus 149 ~~~~~~~~~~y~~~~~~~~~-------~~~~lkIvvd~~~G~~~~~~~~il-~~lg~~~~~i-~~~~dg~f~~~~p~p~~ 219 (463)
T 1p5d_X 149 SVEQVDILPRYFKQIRDDIA-------MAKPMKVVVDCGNGVAGVIAPQLI-EALGCSVIPL-YCEVDGNFPNHHPDPGK 219 (463)
T ss_dssp EEEECCCHHHHHHHHHTTCC-------CSSCEEEEEECTTSGGGGTHHHHH-HHHHEEEEEE-SCSCCTTCCSSCSCTTS
T ss_pred CEEEECCHHHHHHHHHHHHH-------CCCCCEEEEECCCCHHHHHHHHHH-HHCCCCEEEE-CCCCCCCCCCCCCCCCC
T ss_conf 42450428899999986433-------148998999899971899999999-9749939998-16259988999989983
Q ss_pred CCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHC
Q ss_conf 221047888612258607898648874568853-8872274659999999998720204787168753108379999840
Q gi|254781107|r 254 IHAKDLYDRMMMHDSADFGAACDGDGDRSMILG-KGIFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSAALDRVAE 332 (542)
Q Consensus 254 ~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd-~g~~i~~~d~l~ll~~~~~~~~~~~~~~~~vv~t~~sS~~i~~ia~ 332 (542)
++.++...+.++++++|+|+++||||||++++| +|.++.+++++++++.+++... ....++.+++||..+.++++
T Consensus 220 ~e~l~~l~~~v~~~~~dlgia~DgDaDR~~~vd~~G~~i~~d~~~~lla~~l~~~~----~~~~vv~~~~~s~~~~~~~~ 295 (463)
T 1p5d_X 220 PENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRN----PGADIIFDVKCTRRLIALIS 295 (463)
T ss_dssp GGGGHHHHHHHHHTTCSEEEEECTTSSBEEEEETTCCEECHHHHHHHHHHHHHHHS----TTCEEEEETTSCTHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHC----CCCCEEEEECCHHHHHHHHH
T ss_conf 99999999999855987114886897727888058819871589999999999738----89951012001078999999
Q ss_pred CCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEC-CCCCC-CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCE
Q ss_conf 476159982863266542102697388621123013-47421-5751678999999997246888999988998829661
Q gi|254781107|r 333 KLNLKLFETPTGWKFFNNLLENGMITICGEESFGTG-SNHSR-EKDGIWSILFWLNILAVRGESLLDIVHKHWATYGRNY 410 (542)
Q Consensus 333 ~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~-~~~~~-dkDgi~aal~~le~la~~gk~l~d~l~el~~~yG~~~ 410 (542)
++|+++++|+||||||++.|.+.+++||||+|+|+. ..+.+ ..|+++++++++++++.++++++++++++++.| .
T Consensus 296 ~~g~~~~~t~~G~k~i~~~~~~~~~~~g~E~sg~~~~~~~~~~~dd~i~~~l~l~~~l~~~~~~l~~l~~~~~~~~---~ 372 (463)
T 1p5d_X 296 GYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDI---S 372 (463)
T ss_dssp HTTCEEEEECSSHHHHHHHHHHHCCSEEECTTSBEEETTTTCSSBCHHHHHHHHHHHHHTCSSCHHHHHHTSCCCE---E
T ss_pred HCCCEEEEECCCHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC---C
T ss_conf 7799899968737999999976896899937688888776677763799999999999983995899999726641---8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCC
Q ss_conf 21100136877899999999998775316521156420100000001134677374670899988991999975888878
Q gi|254781107|r 411 YSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTE 490 (542)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~~~i~~~dGik~~~~d~~wiliRpSGTEPk 490 (542)
+.+.+.. ++.+....+|+.+.+... ....++.++||+|+.++|| |+++|||||||+
T Consensus 373 ~~~~~~~-~~~~~k~~v~~~l~~~~~----------------------~~~~~~~~iDGiki~~~dg-w~liRpSgTEP~ 428 (463)
T 1p5d_X 373 TPEINIT-VTEDSKFAIIEALQRDAQ----------------------WGEGNITTLDGVRVDYPKG-WGLVRASNTTPV 428 (463)
T ss_dssp CCCEEEE-CCTTTHHHHHHHHHHHCC----------------------CCSSEEECSSSEEEEETTE-EEEEEECSSSSE
T ss_pred CCEEEEE-CCHHHHHHHHHHHHHHHH----------------------HCCCCEECCCEEEEECCCE-EEEEEECCCCCE
T ss_conf 8447420-585668999999999986----------------------2204700044289981988-999980498245
Q ss_pred CCEEEEEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 558999999528997899999999999999
Q gi|254781107|r 491 NSTLRVYIDNYEPDSSKHLKNTQEMLSDLV 520 (542)
Q Consensus 491 ~~~iRiy~E~~~~~~~~~l~~~~~~l~~li 520 (542)
+|||+|+.++ +.++++.+.+++.+
T Consensus 429 ---iRiy~Ea~~~---~~~e~l~~~~~~~i 452 (463)
T 1p5d_X 429 ---LVLRFEADTE---EELERIKTVFRNQL 452 (463)
T ss_dssp ---EEEEEEESSH---HHHHHHHHHHHHHH
T ss_pred ---EEEEEEECCH---HHHHHHHHHHHHHH
T ss_conf ---8999974999---99999999999999
No 7
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00 E-value=0 Score=612.83 Aligned_cols=434 Identities=24% Similarity=0.357 Sum_probs=348.1
Q ss_pred CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCC-CCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 7888876742045054441789999999999754654-883899964767868999999999997898799967898065
Q gi|254781107|r 12 QDQKPGTSGLRKKVSVFQQNSYTENFIQAIFNNVDCA-EKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILS 90 (542)
Q Consensus 12 ~~l~FGT~GiRG~~~~~~~~~~~~~~~~ai~~~~~~~-~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~P 90 (542)
..++|||+||||+++..+++.++.++++++++.+... +++|+||||+|++|++++++++.+|.++|++|+.+ .|++|
T Consensus 10 ~~i~FGT~GiRG~~~~~lt~~~~~~~~~a~~~~l~~~~~~~VvVG~DtR~ss~~l~~a~~~gl~a~G~~V~~~--~G~~p 87 (464)
T 1tuo_A 10 APIRFGTEGFRGVIAREFTFATLHRLAEAYGRHLLERGGGLVVVGHDTRFLADAFARALSGHLAGMGLKVVLL--KGPVP 87 (464)
T ss_dssp CCCCCCSSSEEEEBTTTBCHHHHHHHHHHHHHHHHHTTCCEEEEEECSSTTHHHHHHHHHHHHHHHTCEEEEE--SSSCC
T ss_pred CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEC--CCCCC
T ss_conf 7877408871412387659999999999999999872959899996996449999999999999769979987--89777
Q ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHCC
Q ss_conf 07999999850898179995765798988777358736878657867988999999740500013444687121031002
Q gi|254781107|r 91 TPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKEL 170 (542)
Q Consensus 91 TP~~~~av~~~~~~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (542)
||+++|+++++++++||||||||||++|| |+||++++|.++.++.++.|+..+..-. . .
T Consensus 88 TP~l~~~v~~~~~~~gi~itaSHnp~~~n---giK~~~~~g~~~~~~~~~~i~~~~~~~~---------~---------~ 146 (464)
T 1tuo_A 88 TPLLSFAVRHLKAAGGAMLTASHNPPQYL---GVKFKDATGGPIAQEEAKAIEALVPEEA---------R---------A 146 (464)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSCTTEE---EEEEEETTTEECCHHHHHHHHHTCCSCC---------C---------C
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCHHHC---CCEECCCCCCCCCHHHHHHHHHHHHHHH---------H---------H
T ss_conf 79999999836998448985689974755---6310344477676699999986311223---------2---------0
Q ss_pred CCCEEEEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEE-EEEECCCCCCCCCCCC
Q ss_conf 575058984022267543320780322001337846998503554401221112310585012-3320157875476446
Q gi|254781107|r 171 ANMTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTG-SVRNFIPLEDFGGCHP 249 (542)
Q Consensus 171 ~~~~~~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~-~~~~~~pd~~F~~~~P 249 (542)
........|..+.|.+.....++...++ ..++++++||+||+++.+++.+|. .++.... ...++.|++.|++++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~g~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~f~~~~~ 222 (464)
T 1tuo_A 147 LEGAYETLDLREAYFEALKAHLDLKALS---GFSGVLYHDSMGGAGAGFLKGFLR-HVGLEIPVRPIREEPHPLFHGVNP 222 (464)
T ss_dssp CCCCCEEECCHHHHHHHHHTTSCHHHHT---TCCSCEEEECTTSTTTTHHHHHHH-HTTCCCCEEEESCSCCTTGGGSCS
T ss_pred CCCCCEECCHHHHHHHHHHCCCCHHHHC---CCCEEEEECCCCCCCCHHHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 2686111131666665420133222202---466069603434542045689987-516543235511068899898888
Q ss_pred CCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEECC-CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHH
Q ss_conf 85422210478886122586078986488745688538-87227465999999999872020478716875310837999
Q gi|254781107|r 250 DPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMILGK-GIFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSAALD 328 (542)
Q Consensus 250 nP~~~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd~-g~~i~~~d~l~ll~~~~~~~~~~~~~~~~vv~t~~sS~~i~ 328 (542)
+|..+.+......++++.++|+|+++||||||++++++ |.++.+++++++++.++... .....++.++.+|..++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~adlgia~DgD~DR~~~vd~~g~~~~~d~i~~l~~~~~~~~----~~~~~~~~~~~~s~~~~ 298 (464)
T 1tuo_A 223 EPIPKNLGVTLAVLGPETPPSFAVATDGDADRVGVVLPGGVFFNPHQVLTTLALYRFRK----GHRGRAVKNFAVTWLLD 298 (464)
T ss_dssp CCSGGGCHHHHHHHTTCCTTCEEEEECTTSSBEEEEETTTEEECHHHHHHHHHHHHHHT----TCCSEEEEETTSCTHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEECCCEEECCHHHHHHHHHHHHHH----CCCCCCCCHHHHHHHHH
T ss_conf 96413379999998775176377776378855899928980887499999999999974----76886430012577878
Q ss_pred HHHCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEC-CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
Q ss_conf 9840476159982863266542102697388621123013-474215751678999999997246888999988998829
Q gi|254781107|r 329 RVAEKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTG-SNHSREKDGIWSILFWLNILAVRGESLLDIVHKHWATYG 407 (542)
Q Consensus 329 ~ia~~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~-~~~~~dkDgi~aal~~le~la~~gk~l~d~l~el~~~yG 407 (542)
.+++++|.++++|+|||||+++.|.+.++.||||+|+|+. +.+.+++||++++++++++|+.++++|+|+++++++.|+
T Consensus 299 ~~~~~~g~~~~~t~~G~k~i~~~~~~~~~~~~~e~sg~~~~~~~~~~~D~i~~~l~il~~l~~~~~~l~~~~~~l~~~~~ 378 (464)
T 1tuo_A 299 RLGERLGFGVTTTPVGFKWIKEEFLKGDCFIGGEESGGVGYPEHLPERDGILTSLLLLESVAATGKDLAEQFKEVEALTG 378 (464)
T ss_dssp HHHHHHTCCEEEECSSHHHHHHHHTTTCEEEEECTTSBEEETTTEEEECHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHT
T ss_pred HHHHHHCCCEEEECCHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 99997087327733418999999860894896526587534752557742779999999999829999999999898728
Q ss_pred CCE-EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCC
Q ss_conf 661-2110013687789999999999877531652115642010000000113467737467089998899199997588
Q gi|254781107|r 408 RNY-YSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISG 486 (542)
Q Consensus 408 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~~~i~~~dGik~~~~d~~wiliRpSG 486 (542)
..+ +.+.+....... .+...+ . +..+. ......+.++||+|+.++|+ |+++||||
T Consensus 379 ~~~~~~~~~~~~~~~~----~~~~~~----~--~~~~~-------------~~~~~~i~~iDgv~~~~~~g-~~lvRpSG 434 (464)
T 1tuo_A 379 LTHAYDRLDLPLKAPL----DLTPFR----E--PRPLA-------------GLTPKGVDTLDGVKWLYEEA-WVLFRASG 434 (464)
T ss_dssp CCCEEEEEC-------------------------CCCT-------------TCCEEEEECSSSEEEEETTE-EEEEECC-
T ss_pred CCCCCEECCCCHHHHH----HHHHHH----C--CHHHC-------------CCCCCCEEECCEEEEECCCE-EEEEECCC
T ss_conf 7620100144222267----888642----4--05343-------------67633245045189982998-99998229
Q ss_pred CCCCCCEEEEEEEECCC
Q ss_conf 88785589999995289
Q gi|254781107|r 487 TDTENSTLRVYIDNYEP 503 (542)
Q Consensus 487 TEPk~~~iRiy~E~~~~ 503 (542)
|||+ ||||+|+.++
T Consensus 435 TEp~---vRvyaEa~~~ 448 (464)
T 1tuo_A 435 TEPV---VRIYVEAQSP 448 (464)
T ss_dssp -------CEEEEEESSH
T ss_pred CCCE---EEEEEEECCH
T ss_conf 8006---8999985999
No 8
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=100.00 E-value=0 Score=576.88 Aligned_cols=448 Identities=19% Similarity=0.212 Sum_probs=347.4
Q ss_pred CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCH
Q ss_conf 88887674204505444178999999999975465488389996476786899999999999789879996789806507
Q gi|254781107|r 13 DQKPGTSGLRKKVSVFQQNSYTENFIQAIFNNVDCAEKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTP 92 (542)
Q Consensus 13 ~l~FGT~GiRG~~~~~~~~~~~~~~~~ai~~~~~~~~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP 92 (542)
+| |||+||||+++..+++.++.++++++++.+.. +++|+||||+|++|++++++++.+|.++|++|+. .|++|||
T Consensus 3 ~l-FGt~GiRG~~~~~~t~~~v~~~~~a~~~~l~~-~~~VvIG~DtR~ss~~l~~a~~~gl~a~Gv~V~d---~g~~~TP 77 (455)
T 2f7l_A 3 KL-FGTDGVRGIVNKELTPELVLKLSKAIGTFFGK-NSKILVGRDVRAGGDMLVKIVEGGLLSVGVEVYD---GGMAPTP 77 (455)
T ss_dssp SS-CCSSSEEEEBTTTBCHHHHHHHHHHHHHHHCT-TCEEEEEECSCTTHHHHHHHHHHHHHHTTCEEEE---EEECCHH
T ss_pred CC-CCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC-CCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEE---CCCCCHH
T ss_conf 53-28888013538986999999999999999678-9859999899716999999999999976997998---7977749
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHCCCC
Q ss_conf 99999985089817999576579898877735873687865786798899999974050001344468712103100257
Q gi|254781107|r 93 AVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELAN 172 (542)
Q Consensus 93 ~~~~av~~~~~~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (542)
+++|+++++++++||||||||||++|| |+|+|+++|+++.++.+..|+..+..-... ...... ...
T Consensus 78 ~l~~~v~~~~~~~gi~iTaShnp~~~n---g~k~~~~~G~~~~~~~~~~i~~~~~~~~~~------~~~~~~-----~~~ 143 (455)
T 2f7l_A 78 ALQYAVKTLGYDGGVVITASHNPAPYN---GIKVVDKDGIEIRREKENEIEDLFFTERFN------TIEWSS-----LTT 143 (455)
T ss_dssp HHHHHHHHHCCSEEEEECCTTSCTTEE---EEEEECTTSSBCCHHHHHHHHHHHHHTCCC------CCCGGG-----CCC
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCC---CCEEECCCCCCCCCCHHHHHHHHHHHCCCC------CCCCCC-----CCC
T ss_conf 999999956998379996279986457---816750357534520223367776430013------445333-----345
Q ss_pred CEEEEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 50589840222675433207803220013378469985035544012211123105850123320157875476446854
Q gi|254781107|r 173 MTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPN 252 (542)
Q Consensus 173 ~~~~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~~~~~~~pd~~F~~~~PnP~ 252 (542)
......+..+.|.+.+...++.+.++. ++++|++||+||+++.+++.+|+ .+++..... ++.+|+.|++++|+|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~d~~~g~~~~~~~~~~~-~l~~~~~~~-~~~~d~~~~~~~~~~~ 218 (455)
T 2f7l_A 144 EVKREDRVISTYVNGILSHVDIEKIKK---KNYKVLIDPANSVGALSTPLVAR-ALGCKIYTI-NGNLDPLFSARQPEPT 218 (455)
T ss_dssp CCEECCCHHHHHHHHHHTTSCHHHHHH---HCCEEEEECTTTGGGGTHHHHHH-HTTCEEEEB-SCSCCTTCTTSCSSCC
T ss_pred CCCHHHHHHHHHHHHHHHCCCHHHHHH---CCCEEEEECCCCCCCCCCCHHHH-HHCCEEEEE-ECCCCCCCCCCCCCCC
T ss_conf 432026789999998764011445641---59569997787742224503355-417614574-0257999887888874
Q ss_pred CCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEECCC-CCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHH
Q ss_conf 222104788861225860789864887456885388-7227465999999999872020478716875310837999984
Q gi|254781107|r 253 LIHAKDLYDRMMMHDSADFGAACDGDGDRSMILGKG-IFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSAALDRVA 331 (542)
Q Consensus 253 ~~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd~g-~~i~~~d~l~ll~~~~~~~~~~~~~~~~vv~t~~sS~~i~~ia 331 (542)
......+ ...+...++|+|+++||||||++++++. ..+.++.+.+ ++++++..+ .......+++++.+|.+++.++
T Consensus 219 ~~~~~~~-~~~~~~~~~d~g~~~D~D~DR~~~~~~~g~~~~~~~~~~-~~a~~~~~~-~~~~~~~~~~~~~~s~~~~~~~ 295 (455)
T 2f7l_A 219 FDSLKET-AEVVKTLKVDLGVAHDGDADRAIFIDSEGRVQWGDRSGT-LLSYWASVK-NPKAIKKIVTAVSSSSLVEEYL 295 (455)
T ss_dssp TTTSHHH-HHHHHHTTCSEEEECCTTSCCCEEEETTSCBCCHHHHHH-HHHHHHHHT-CTTSCSEEEEETTSCTHHHHHH
T ss_pred HHHHHHH-HHHHHHCCCCEEEEECCCCCCCCCCCCCCEEECCHHHHH-HHHHHHHHH-CCCCCCCCCCCCCCCHHHHHHH
T ss_conf 2567777-788873286636787143221000234430432315899-999999873-7566555554323330145678
Q ss_pred CCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEC-CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCE
Q ss_conf 0476159982863266542102697388621123013-474215751678999999997246888999988998829661
Q gi|254781107|r 332 EKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTG-SNHSREKDGIWSILFWLNILAVRGESLLDIVHKHWATYGRNY 410 (542)
Q Consensus 332 ~~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~-~~~~~dkDgi~aal~~le~la~~gk~l~d~l~el~~~yG~~~ 410 (542)
+++|.+++++++|++|+++.|.+.++++|||+|+|+. ..+.+++||++++++++++++.+++++++++++++ ..+
T Consensus 296 ~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~E~sg~~~~~~~~~~~D~i~~~ll~~~~l~~~~~~l~~l~~~l~----~~~ 371 (455)
T 2f7l_A 296 SKYNIQVDWTKVGSVDIAHKVADENALAGFEENGGFMYPPHQYVRDGAMSFALMLELLANENVSSAELFDRLP----KYY 371 (455)
T ss_dssp HTTTCEEEEECSCHHHHHHHHHHTTCSEEEETTEEEEBTTTBSSCCHHHHHHHHHHHHHHHTCCHHHHHHTSC----CCE
T ss_pred HHCCCEEEEEEECHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH----HHH
T ss_conf 7619712553244899999984589089964768626302344664788999999999981863899999756----640
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCC
Q ss_conf 21100136877899999999998775316521156420100000001134677374670899988991999975888878
Q gi|254781107|r 411 YSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTE 490 (542)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~~~i~~~dGik~~~~d~~wiliRpSGTEPk 490 (542)
..+......+.......++.+.+.+... ......+||+|+.++|+ |+++|||||||+
T Consensus 372 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~iDgik~~~~~g-r~~vRpSGTEp~ 428 (455)
T 2f7l_A 372 LVKTKVDLKPGLMVEEIYKKILEVYSTS----------------------SVKAITIDGVKIIGKDF-WFLVRKSGTEPI 428 (455)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHCCT----------------------TSEEECSSSEEEEETTE-EEEEEECSSSSE
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHCCC----------------------CCCEEEECEEEEECCCE-EEEEECCCCCEE
T ss_conf 1120120470132999999999763236----------------------45344404499984988-999980298105
Q ss_pred CCEEEEEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 558999999528997899999999999999
Q gi|254781107|r 491 NSTLRVYIDNYEPDSSKHLKNTQEMLSDLV 520 (542)
Q Consensus 491 ~~~iRiy~E~~~~~~~~~l~~~~~~l~~li 520 (542)
+|||+|+.++ +..+++.+.++++|
T Consensus 429 ---vRvYaEa~~~---~~a~~l~~~i~~lV 452 (455)
T 2f7l_A 429 ---IRIMAEAKDE---NVANNLVNELKKIV 452 (455)
T ss_dssp ---EEEEEEESSH---HHHHHHHHHHHHHH
T ss_pred ---EEEEEEECCH---HHHHHHHHHHHHHH
T ss_conf ---8999986899---99999999999997
No 9
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magnesium, metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=100.00 E-value=0 Score=548.99 Aligned_cols=415 Identities=20% Similarity=0.269 Sum_probs=312.2
Q ss_pred CCCCCCCEEE-CCCCCHHHHHHHHHHHHHHCCC--CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCH
Q ss_conf 8767420450-5444178999999999975465--488389996476786899999999999789879996789806507
Q gi|254781107|r 16 PGTSGLRKKV-SVFQQNSYTENFIQAIFNNVDC--AEKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTP 92 (542)
Q Consensus 16 FGT~GiRG~~-~~~~~~~~~~~~~~ai~~~~~~--~~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP 92 (542)
|||+||||++ +...++.++.++++++++.+.. ..++|+||||+|++|++++.+++.+|.++|++|+.+ |++|||
T Consensus 5 FGt~GiRG~v~~~~~t~~~v~~l~~a~~~~l~~~~~~~~VvVG~D~R~sS~~l~~~i~~gl~s~Gv~V~d~---g~~~TP 81 (443)
T 3i3w_A 5 FGTDGIRGEVANSTITVEFTQKLGNAVGSLINQKNYPKFVIVGQDTRSSGGFLKFALVSGLNAAGIDVLDL---GVVPTP 81 (443)
T ss_dssp CCSSSSEEEBSSSSBSHHHHHHHHHHHHHHHHHTTCCSEEEEEECSCTTHHHHHHHHHHHHHHHTCEEEEE---EECCHH
T ss_pred CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEC---CCCCHH
T ss_conf 48888606887977699999999999999998369998799997999888999999999999869959995---878859
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHCCCC
Q ss_conf 99999985089817999576579898877735873687865786798899999974050001344468712103100257
Q gi|254781107|r 93 AVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDVDINHIGTKELAN 172 (542)
Q Consensus 93 ~~~~av~~~~~~~GImITASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (542)
+++|+++++++++||||||||||++|| |+|+++++|+++.++..+.|++........... .. ..
T Consensus 82 ~l~~~v~~~~a~~gi~itaShnp~~~n---gik~~~~~G~~~~~~~~~~i~~~~~~~~~~~~~----~~---------~~ 145 (443)
T 3i3w_A 82 VVAFMTVKHRAAAGFVITASHNKFTDN---GIKLFSSNGFKLDDALEEEVEDMIDGDFIYQPQ----FK---------FG 145 (443)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSCTTEE---EEEEEETTSCBCCHHHHHHHHHHHTSCCCCCTT----SC---------CC
T ss_pred HHHHHHHHHCCCCCCEEECCCCCCCCC---CEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCC----CC---------CC
T ss_conf 999999971888741452368960017---466320478646055555678876402334454----55---------67
Q ss_pred CEEEEEEECHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 50589840222675433207803220013378469985035544012211123105850123320157875476446854
Q gi|254781107|r 173 MTISVIDPIENYVALMENIFDFDAIRKLLSFGFRIDIDCMNAVTGPYAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPN 252 (542)
Q Consensus 173 ~~~~~~d~~~~Y~~~l~~~~d~~~i~~~~~~~l~IvvD~~nGa~~~~~~~il~~~lg~~~~~~~~~~pd~~F~~~~PnP~ 252 (542)
......+....|........ ......+++|++|++||+++.+.++++. .+++.+... ++.||+.|+...|+|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~vd~~~g~~~~~~~~~~~-~~~~~~~~~-~~~~d~~~~~~~~~~- 217 (443)
T 3i3w_A 146 SYKILANAIDEYIESIYSRF-----AKFVNYKGKVVVDCAHGAASHNFEALLD-KFGINYVSI-ASNPDGLNINVGCGA- 217 (443)
T ss_dssp CEEECTTTTHHHHHHHHHHH-----TTTCCCCSEEEEECTTSTTTTHHHHHHH-HTTCEEEES-SCCCCSSCTTTTCST-
T ss_pred CCCCCHHHHHHHHHHHHHCC-----HHHCCCCCEEEEECCCCCCHHHHHHHHH-HCCCCCCEE-ECCCCCCCCCCCCCC-
T ss_conf 62231357777777765211-----0120468659998788852013456654-203344223-137899999998763-
Q ss_pred CCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEECC-CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHH
Q ss_conf 22210478886122586078986488745688538-87227465999999999872020478716875310837999984
Q gi|254781107|r 253 LIHAKDLYDRMMMHDSADFGAACDGDGDRSMILGK-GIFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSAALDRVA 331 (542)
Q Consensus 253 ~~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~ivd~-g~~i~~~d~l~ll~~~~~~~~~~~~~~~~vv~t~~sS~~i~~ia 331 (542)
+.... ..+++++.++|+|+++||||||++++|+ |..+.+++++++++.|+... .+...|+.+++||.+++.++
T Consensus 218 -~~~~~-~~~~v~~~~adlg~~~D~DgDR~~~id~~g~~~~~~~~~~lla~~~~~~----~~~~~vv~~~~~s~~~~~~~ 291 (443)
T 3i3w_A 218 -TCVSN-IKKAVKEQKADLGISLDGDADRIIIVDENGQEIDGDGILNILAQYSDIC----GGTNGIVGTQMTNMSYENHY 291 (443)
T ss_dssp -TCHHH-HHHHHHHHTCSEEEEECTTSCBEEEECTTSCEECHHHHHHHHHHTTTTT----TCCSCEEEETTSCHHHHHHH
T ss_pred -HHHHH-HHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH----CCCCCCEEEECCHHHHHHHH
T ss_conf -04678-9999971799889998599988999979866665179999999999985----79987202312055899999
Q ss_pred CCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEC-CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCE
Q ss_conf 0476159982863266542102697388621123013-474215751678999999997246888999988998829661
Q gi|254781107|r 332 EKLNLKLFETPTGWKFFNNLLENGMITICGEESFGTG-SNHSREKDGIWSILFWLNILAVRGESLLDIVHKHWATYGRNY 410 (542)
Q Consensus 332 ~~~g~~~~~t~vGfk~I~~~m~~~~~~~ggEeS~G~~-~~~~~dkDgi~aal~~le~la~~gk~l~d~l~el~~~yG~~~ 410 (542)
+++|+++++|+|||||+.+.+.+.++.+|||+|+|+. ..+.+.+||++++++++++++.++++|+++..+++ .+
T Consensus 292 ~~~~~~~~~~~~G~~~i~~~~~~~~~~~~~e~sg~~~~~~~~~~~D~~~~~l~l~~~l~~~~~~l~~~~~~~~-----~~ 366 (443)
T 3i3w_A 292 RANKIPFIRSKVGDRYVLEDLVKYGYKIGGESSGHVINLNFGTTGDGLFTAIQLLAIFSQADKPVSEFKLQGE-----LM 366 (443)
T ss_dssp HHTTCCEEEESSSTTHHHHHHHHHTCCEEECTTSBEEETTTCSSCCHHHHHHHHHHHTTTCSSCGGGTSCSSC-----CC
T ss_pred HHCCCCEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCC-----CC
T ss_conf 9879977997057288899997439558871368855445554786388999999999984998999986266-----57
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCC
Q ss_conf 21100136877899999999998775316521156420100000001134677374670899988991999975888878
Q gi|254781107|r 411 YSRYDYLGIPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFVYTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTE 490 (542)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~~~~~~~~~i~~~dGik~~~~d~~wiliRpSGTEPk 490 (542)
.++..-..+..+...+.++ .....+||++..++|++|+++|||||||
T Consensus 367 ~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~d~~w~~iRpSgTEp- 413 (443)
T 3i3w_A 367 QQTLINVPLTKKVAREDLQ--------------------------------KVASDVNDVEKRLGNRGRVLLRPSGTEP- 413 (443)
T ss_dssp EEEEEEEECSSCCCHHHHH--------------------------------TTHHHHHHHHHHHGGGEEEEEEEETTEE-
T ss_pred CCEEECCCCCHHHHHHHHH--------------------------------HHHHHHHCCEEEECCCEEEEEECCCCCC-
T ss_conf 7212442212345688899--------------------------------9999984403797797699998389800-
Q ss_pred CCEEEEEEEECCC
Q ss_conf 5589999995289
Q gi|254781107|r 491 NSTLRVYIDNYEP 503 (542)
Q Consensus 491 ~~~iRiy~E~~~~ 503 (542)
++|||+|+.++
T Consensus 414 --~irvY~Ea~~~ 424 (443)
T 3i3w_A 414 --VLRVMVEADDK 424 (443)
T ss_dssp --EEEEEEEESSH
T ss_pred --EEEEEEEECCH
T ss_conf --68999985999
No 10
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=100.00 E-value=0 Score=473.30 Aligned_cols=439 Identities=16% Similarity=0.143 Sum_probs=273.4
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEECC---CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHH-CCCEEEEE
Q ss_conf 9999999997546548838999647---6786899999999999789879996789806507999999850-89817999
Q gi|254781107|r 34 TENFIQAIFNNVDCAEKTLVVGGDG---RFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKY-KASGGIIL 109 (542)
Q Consensus 34 ~~~~~~ai~~~~~~~~~~VvIG~D~---R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP~~~~av~~~-~~~~GImI 109 (542)
.++++.++..+. ...+++++||| |..++.++..++++ | +++ +...+.+ ++++||||
T Consensus 4 ~~~~~~~~~~~~--~~~~~~~~YgtagfR~~a~~l~~v~~~~----g----------~~a----~l~s~~~~g~~~GImI 63 (544)
T 2dka_A 4 EQTLSQYLPSHP--KPQGVTFTYGTAGFRMKADKLDYVTFTV----G----------IIA----SLRSKYLQGKTVGVMI 63 (544)
T ss_dssp HHHHHTTGGGCC--CCSSCCCCCBTTBEEEEGGGCHHHHHHH----H----------HHH----HHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHCC--CCCCCEEEECCCCCCCCHHHHHHHHHHH----H----------HHH----HHHHHHHCCCCEEEEE
T ss_conf 899999998369--9899657407853336424454899999----9----------999----9987875797678998
Q ss_pred ECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC----------------CHHHC--------
Q ss_conf 576579898877735873687865786798899999974050001344468----------------71210--------
Q gi|254781107|r 110 TASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKITSYQIIEANDV----------------DINHI-------- 165 (542)
Q Consensus 110 TASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~~----------------~~~~~-------- 165 (542)
||||||++|| |||+|+++|+|+.++.++.|++.++............. +....
T Consensus 64 TASHNP~~dN---G~Kv~~~~G~~l~~~~e~~i~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~vg~D 140 (544)
T 2dka_A 64 TASHNPPEDN---GVKVVDPLGSMLESSWEKYATDLANASPSPSNDSEGEKNSLVEVIKNLVSDLKIDLSIPANVVIARD 140 (544)
T ss_dssp CCC-CCTTEE---EEEEECTTSSBCCGGGHHHHHHHHHSBSCC------CTTBHHHHHHHHHHHTTCCTTSCEEEEEEEC
T ss_pred CCCCCCCCCC---EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
T ss_conf 1477881067---7999889989888699999999872645443321101456788998776543012256772587422
Q ss_pred -----------CHHCCCC-CEEEEEE------------------------ECHHHHHHHHHCCCC-HHHHCCCCCCCEEE
Q ss_conf -----------3100257-5058984------------------------022267543320780-32200133784699
Q gi|254781107|r 166 -----------GTKELAN-MTISVID------------------------PIENYVALMENIFDF-DAIRKLLSFGFRID 208 (542)
Q Consensus 166 -----------~~~~~~~-~~~~~~d------------------------~~~~Y~~~l~~~~d~-~~i~~~~~~~l~Iv 208 (542)
....+.. .-.+.+| ..+.|.+.+.+.+.. .........+++|+
T Consensus 141 tR~ss~~l~~a~~~gl~~~~g~~v~d~g~vtTP~l~~~~~~~n~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~iv 220 (544)
T 2dka_A 141 SRESSPALSMATIDGFQSVPNTKYQDFGLFTTPELHYVTRTLNDPDFGKPTEDGYYSKLAKSFQEIYTICESNNEKIDIT 220 (544)
T ss_dssp SCTTHHHHHHHHHHHHHTSSSEEEEEEEECCHHHHHHHHHHHHCGGGCCSSHHHHHHHHHHHHHHHHTC-----CCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 77672999999999988605980787233265435554430372220771167899999999999873222025783498
Q ss_pred EEECCCCCHHHHHHHHHHHCCCEEEEE--EECCCCC-CCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCEEEEE
Q ss_conf 850355440122111231058501233--2015787-5476446854222104788861225860789864887456885
Q gi|254781107|r 209 IDCMNAVTGPYAKEILERKLGAPTGSV--RNFIPLE-DFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDGDRSMIL 285 (542)
Q Consensus 209 vD~~nGa~~~~~~~il~~~lg~~~~~~--~~~~pd~-~F~~~~PnP~~~~~~~l~~~~~~~~~aDlgiA~DgDaDR~~iv 285 (542)
+||+||+|+.+++++|+ .+|+.+..+ .+..+++ ++.+..|+|+.+...++..+.+.+.++|+|+|+||||||++++
T Consensus 221 ~d~~nG~g~~~~~~ll~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~a~DgDaDRl~~~ 299 (544)
T 2dka_A 221 IDAANGVGAPKIQELLE-KYLHKEISFTVVNGDYKQPNLLNFDCGADYVKTNQKLPKNVKPVNNKLYASFDGDADRLICY 299 (544)
T ss_dssp EECTTSTHHHHHHHHHH-HHSTTTEEEEEESCCTTCGGGTTSSCSHHHHHHHCSCCTTCCCCBTCCEEEECTTSCCEEEE
T ss_pred EECCCCCCHHHHHHHHH-HHCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEE
T ss_conf 74577630789999999-83786347720456689998988998854212589999987634886654367875544787
Q ss_pred C-----CCCCCCCHHHHHHHHHHHHHCCCCCCC-----CC-EEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHCC
Q ss_conf 3-----887227465999999999872020478-----71-687531083799998404761599828632665421026
Q gi|254781107|r 286 G-----KGIFVNPSDSLAIMVANAGLIPGYATG-----LV-GVARSMPTSAALDRVAEKLNLKLFETPTGWKFFNNLLEN 354 (542)
Q Consensus 286 d-----~g~~i~~~d~l~ll~~~~~~~~~~~~~-----~~-~vv~t~~sS~~i~~ia~~~g~~~~~t~vGfk~I~~~m~~ 354 (542)
+ +|.++++++++++++.|+......... .. .|+++++|+.+++.+++++|+++++|+||||||++.|.+
T Consensus 300 ~~~~~~~~~~l~Gd~i~~Lla~~l~~~~~~~~~~~~~~~~~~V~t~~~s~~~~~~i~~~~g~~~~~t~tG~k~i~~~~~~ 379 (544)
T 2dka_A 300 YQNNDNKFKLLDGDKLSTLFALFLQQLFKQIDPTKISLNIGVVQTAYANGSSTKYVEDVLKIPVRCTPTGVKHLHHEAEN 379 (544)
T ss_dssp EECTTSCEEEECHHHHHHHHHHHHHHHHTTSCTTTCCCCEEEEECTTSCHHHHHHHHHTSCCCEEECCSSHHHHHHHHTT
T ss_pred ECCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
T ss_conf 51665564252699999999999998513157765456777079983476689999997698289981552889999874
Q ss_pred CCEEEECCCCCEE--C---------CCCCCCCCCHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 9738862112301--3---------4742157516789999999972-----4688899998899882966121100136
Q gi|254781107|r 355 GMITICGEESFGT--G---------SNHSREKDGIWSILFWLNILAV-----RGESLLDIVHKHWATYGRNYYSRYDYLG 418 (542)
Q Consensus 355 ~~~~~ggEeS~G~--~---------~~~~~dkDgi~aal~~le~la~-----~gk~l~d~l~el~~~yG~~~~~~~~~~~ 418 (542)
.++.+|||+|++. . ..+.+++||+++++++|++++. .|+++++++..++......+
T Consensus 380 ~~~~~~~E~~ghg~~~~~~~~~~~~~~~~~~~d~~~~a~~~l~~~~~~~~~~~Gd~l~~~l~~~~~~~~~~~-------- 451 (544)
T 2dka_A 380 FDIGVYFEANGHGTVIFNPEAEKKIFDYKPNNDNEAKAIKVLQNFSQLINQTVGDAISDLLAVLIVVHYLKL-------- 451 (544)
T ss_dssp SSEEEEECTTSCEEEEECHHHHHHHHHCCCSSHHHHHHHHHHHHHHHHSCSSSCCHHHHHHHHHHHHHHTTC--------
T ss_pred HCCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC--------
T ss_conf 120000521486358604102543102324656899999999999998642004169999999999875499--------
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHH------CCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCC
Q ss_conf 8778999999999987753165211564201000000------0113467737467089998899199997588887855
Q gi|254781107|r 419 IPTEKAQDFMNDFRYRLKNLIGSSFIGQKIKQAGDFV------YTDSTNGNVSDKQGIRVVFDNHSRIIYRISGTDTENS 492 (542)
Q Consensus 419 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~d~~------~~~~~~~~i~~~dGik~~~~d~~wiliRpSGTEPk~~ 492 (542)
. +.+....+.+ .|....+.++.....+. ..........++||+++.++|| |++|||||||||
T Consensus 452 -~-------~~~~~~~~~~-~p~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~idgi~~~~~~g-~~~vRpSGTEP~-- 519 (544)
T 2dka_A 452 -S-------PSDWDNEYTD-LPNKLVKVIVPDRSIFKTTNAERTLVEPKGMQDEIDKLVAQYPNG-RSFVRASGTEDA-- 519 (544)
T ss_dssp -C-------HHHHHTTSCC-CCEEEEEC-------CCCCTTTC-CC-CTTHHHHHHHHHTTSTTC-EEEEEEC----C--
T ss_pred -C-------HHHHHHHHHH-CCHHCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCE-EEEEECCCCCCE--
T ss_conf -9-------9999987554-001101544254675532267765135422323314399982988-999974798202--
Q ss_pred EEEEEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 8999999528997899999999999999
Q gi|254781107|r 493 TLRVYIDNYEPDSSKHLKNTQEMLSDLV 520 (542)
Q Consensus 493 ~iRiy~E~~~~~~~~~l~~~~~~l~~li 520 (542)
||||+|+.++ +..+++.+.++++|
T Consensus 520 -iRiY~Ea~s~---~~a~~l~~~~~~lv 543 (544)
T 2dka_A 520 -VRVYAEADTQ---NNVEELSKAVSELV 543 (544)
T ss_dssp -EEEEEECSSH---HHHHHHHHHHHHHH
T ss_pred -EEEEEEECCH---HHHHHHHHHHHHHH
T ss_conf -6999986999---99999999999964
No 11
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=98.82 E-value=1.2e-09 Score=79.86 Aligned_cols=48 Identities=23% Similarity=0.241 Sum_probs=34.1
Q ss_pred CCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 4670899988991999975888878558999999528997899999999999999
Q gi|254781107|r 466 DKQGIRVVFDNHSRIIYRISGTDTENSTLRVYIDNYEPDSSKHLKNTQEMLSDLV 520 (542)
Q Consensus 466 ~~dGik~~~~d~~wiliRpSGTEPk~~~iRiy~E~~~~~~~~~l~~~~~~l~~li 520 (542)
.+||++..|+|| |++||||||||. +|||+|+.+ .+.+.++.+.++++|
T Consensus 46 ~Idgi~~~~~~g-r~lvRpSgTEp~---iRi~vE~~~---~~~~~~~~~~i~~~v 93 (112)
T 1wjw_A 46 AINDLVKKYTLA-RAFVRPSGTEDI---VRVYAEANS---QESADRLAYEVSLLV 93 (112)
T ss_dssp HHHHHHHHSSSE-EEEEECSSSSSS---EEEEEEESS---HHHHHHHHHHHHHHH
T ss_pred HHHHHHEECCCE-EEEEEECCCCCE---EEEEEEECC---HHHHHHHHHHHHHHH
T ss_conf 999876246876-899987799857---999996399---999999999999999
No 12
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=98.82 E-value=5.2e-09 Score=75.82 Aligned_cols=54 Identities=15% Similarity=0.120 Sum_probs=45.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCC
Q ss_conf 3899964767868999999999997-89879996789806507999999850898179995765798988
Q gi|254781107|r 51 TLVVGGDGRFYNHIVIQKIIKIAAA-NGFARIIIGKGGILSTPAVSHLIRKYKASGGIILTASHNPAGAT 119 (542)
Q Consensus 51 ~VvIG~D~R~~S~~~a~~~a~~l~~-~Gi~V~~~~~~gi~PTP~~~~av~~~~~~~GImITASHNP~eyN 119 (542)
.|+||+|+|++|+.+.++++.++.+ .|++|+ +.|++|||.++|.+ .+|||++|+
T Consensus 134 ~v~vg~DtR~ss~~l~~a~~~gl~~~~g~~v~---d~g~vtTP~l~~~~------------~~~n~~~~~ 188 (544)
T 2dka_A 134 NVVIARDSRESSPALSMATIDGFQSVPNTKYQ---DFGLFTTPELHYVT------------RTLNDPDFG 188 (544)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHHHTSSSEEEE---EEEECCHHHHHHHH------------HHHHCGGGC
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE---EECCCCCHHHHHHH------------HCCCCHHHC
T ss_conf 25874227767299999999998860598078---72332654355544------------303722207
No 13
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=78.32 E-value=2.8 Score=19.32 Aligned_cols=94 Identities=11% Similarity=0.175 Sum_probs=57.4
Q ss_pred HHHHHHHHCCCCCCCEEEEE---CCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 99999975465488389996---476786899999999999789879996789806507999999850898179995765
Q gi|254781107|r 37 FIQAIFNNVDCAEKTLVVGG---DGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASGGIILTASH 113 (542)
Q Consensus 37 ~~~ai~~~~~~~~~~VvIG~---D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP~~~~av~~~~~~~GImITASH 113 (542)
.+.++.++.+..+.||++.. -.++.+..+...+.......++.|.+--|.| .+-......-+.+.+ .|||-+||
T Consensus 29 ~~~avi~AAee~~sPvIlq~s~~~~~~~~~~~~~~~~~~a~~~~VpvalHlDH~--~~~e~i~~ai~~Gft-SVMiDgS~ 105 (305)
T 1rvg_A 29 FLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHG--SSYESVLRALRAGFT-SVMIDKSH 105 (305)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEE--CSHHHHHHHHHTTCS-EEEECCTT
T ss_pred HHHHHHHHHHHHCCCEEEECCCCHHHHCCHHHHHHHHHHHHHCCCCEEEECCCC--CCHHHHHHHHHCCCC-EEEECCCC
T ss_conf 999999999996999999987457766438999999998766599989974555--798889999874998-79864998
Q ss_pred CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 798988777358736878657867988999999740
Q gi|254781107|r 114 NPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKI 149 (542)
Q Consensus 114 NP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~ 149 (542)
-|-+.| -..++++.+.+...
T Consensus 106 l~~eeN----------------i~~T~~vv~~Ah~~ 125 (305)
T 1rvg_A 106 EDFETN----------------VRETRRVVEAAHAV 125 (305)
T ss_dssp SCHHHH----------------HHHHHHHHHHHHHT
T ss_pred CCHHHH----------------HHHHHHHHHHHHHC
T ss_conf 888999----------------99999999986151
No 14
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=70.28 E-value=4.5 Score=18.04 Aligned_cols=62 Identities=18% Similarity=0.165 Sum_probs=40.7
Q ss_pred CCCCEEEEECCCCCH-HHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECC
Q ss_conf 488389996476786-89999999999978987999678980650799999985089817999576
Q gi|254781107|r 48 AEKTLVVGGDGRFYN-HIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASGGIILTAS 112 (542)
Q Consensus 48 ~~~~VvIG~D~R~~S-~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP~~~~av~~~~~~~GImITAS 112 (542)
..++|+|-|++...+ +.+|+.+++++.+.|++|.+..-. -++-.+.....+....++++.++
T Consensus 3 ~~kkV~IvY~S~tGnT~~~A~~Ia~gl~~~gv~v~~~~~~---~~~~~~~~~~~l~~~d~i~~G~p 65 (159)
T 3fni_A 3 AETSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLG---AAVDLQELRELVGRCTGLVIGMS 65 (159)
T ss_dssp CCCEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESS---SCCCHHHHHHHHHTEEEEEEECC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECC---CCCCHHHHHHHHHCCCEEEECCC
T ss_conf 7888999999998339999999999998629836999855---57877889986502998998377
No 15
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM- barrel, rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=67.16 E-value=5.2 Score=17.63 Aligned_cols=61 Identities=20% Similarity=0.235 Sum_probs=40.9
Q ss_pred CCCEEEE---ECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 8838999---647678689999999999978987999678980650799999985089817999576579
Q gi|254781107|r 49 EKTLVVG---GDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASGGIILTASHNP 115 (542)
Q Consensus 49 ~~~VvIG---~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP~~~~av~~~~~~~GImITASHNP 115 (542)
+++|++| .|..-.+ ...++..|...|.+|++.+. -+|...+.-++++.+.+ .|.|+.|..+
T Consensus 3 k~kVvi~~~~~D~H~lG---~~~va~~l~~~G~~V~~LG~--~~p~e~iv~~~~~~~~d-~V~iS~~~~~ 66 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVG---NKILDHAFTNAGFNVVNIGV--LSPQELFIKAAIETKAD-AILVSSLYGQ 66 (137)
T ss_dssp CCEEEEEEETTCCCCHH---HHHHHHHHHHTTCEEEEEEE--EECHHHHHHHHHHHTCS-EEEEEECSST
T ss_pred CCEEEEEECCCCHHHHH---HHHHHHHHHHCCCEEEECCC--CCCHHHHHHHHHHHCCC-EEEEEECCCC
T ss_conf 98799994698745899---99999999987987997786--66999999999983998-7887611344
No 16
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=66.41 E-value=5.3 Score=17.54 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=53.9
Q ss_pred HHHHHHHHHCCCCCCCEEEEEC---CCCCHHHHHHHHHH-HHHH-CCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 9999999754654883899964---76786899999999-9997-89879996789806507999999850898179995
Q gi|254781107|r 36 NFIQAIFNNVDCAEKTLVVGGD---GRFYNHIVIQKIIK-IAAA-NGFARIIIGKGGILSTPAVSHLIRKYKASGGIILT 110 (542)
Q Consensus 36 ~~~~ai~~~~~~~~~~VvIG~D---~R~~S~~~a~~~a~-~l~~-~Gi~V~~~~~~gi~PTP~~~~av~~~~~~~GImIT 110 (542)
..+.++.++.+..+.+|+|.-- .++.+..+....+. .+.. .++.|.+--|.+ ..-..+..++ ..+.+ .|||-
T Consensus 29 e~~~avi~AAee~~sPvIlq~s~~~~~~~g~~~~~~~~~~~~~~~~~VPv~lHlDH~-~~~e~i~~ai-~~Gft-SVMiD 105 (323)
T 2isw_A 29 EQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPDIPICIHLDHG-DTLESVKMAI-DLGFS-SVMID 105 (323)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEEEEE-CSHHHHHHHH-HTTCS-EEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCC-CCHHHHHHHH-HHCCC-EEEEC
T ss_conf 999999999999499999997855786689788999999999975999989979998-8999999999-71898-69983
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 765798988777358736878657867988999999740
Q gi|254781107|r 111 ASHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKI 149 (542)
Q Consensus 111 ASHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~ 149 (542)
+||.|-+.| -..++++.+.+...
T Consensus 106 gS~lp~eeN----------------I~~Tk~vv~~Ah~~ 128 (323)
T 2isw_A 106 ASHHPFDEN----------------VRITKEVVAYAHAR 128 (323)
T ss_dssp CTTSCHHHH----------------HHHHHHHHHHHHTT
T ss_pred CCCCCHHHH----------------HHHHHHHHHHHHHC
T ss_conf 882339999----------------99999999998653
No 17
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=55.83 E-value=8.2 Score=16.34 Aligned_cols=94 Identities=14% Similarity=0.165 Sum_probs=52.4
Q ss_pred HHHHHHHHCCCCCCCEEEEEC---CCCCHHHHHHHHHHHHH-H-CCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEC
Q ss_conf 999999754654883899964---76786899999999999-7-898799967898065079999998508981799957
Q gi|254781107|r 37 FIQAIFNNVDCAEKTLVVGGD---GRFYNHIVIQKIIKIAA-A-NGFARIIIGKGGILSTPAVSHLIRKYKASGGIILTA 111 (542)
Q Consensus 37 ~~~ai~~~~~~~~~~VvIG~D---~R~~S~~~a~~~a~~l~-~-~Gi~V~~~~~~gi~PTP~~~~av~~~~~~~GImITA 111 (542)
-+.++.++.+..+.||++.-- .++.+..+....+..++ . ..+.|.+--|.| .+...--..-+.+.+ .|||=|
T Consensus 29 ~~~avi~AAe~~~sPvIlq~s~~~~~~~g~~~~~~~~~~~a~~~~~Vpv~lHLDH~--~~~e~i~~ai~~Gft-SVMiDg 105 (307)
T 3n9r_A 29 MLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHG--TTFESCEKAVKAGFT-SVMIDA 105 (307)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEE--CSHHHHHHHHHHTCS-EEEECC
T ss_pred HHHHHHHHHHHHCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCC--CCHHHHHHHHHCCCC-EEEEEC
T ss_conf 99999999999799989984876875679899999999999756998089971787--999999999971998-688609
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 65798988777358736878657867988999999740
Q gi|254781107|r 112 SHNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKKI 149 (542)
Q Consensus 112 SHNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~~ 149 (542)
||.|-+.| -..++++.+.+...
T Consensus 106 S~lp~eeN----------------i~~T~~vve~Ah~~ 127 (307)
T 3n9r_A 106 SHHAFEEN----------------LELTSKVVKMAHNA 127 (307)
T ss_dssp TTSCHHHH----------------HHHHHHHHHHHHHT
T ss_pred CCCCHHHH----------------HHHHHHHHHHHHHC
T ss_conf 98999999----------------99999999998253
No 18
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.80A {Aeropyrum pernix K1}
Probab=50.25 E-value=10 Score=15.78 Aligned_cols=60 Identities=15% Similarity=0.149 Sum_probs=40.6
Q ss_pred CCCEEE---EECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 883899---964767868999999999997898799967898065079999998508981799957657
Q gi|254781107|r 49 EKTLVV---GGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASGGIILTASHN 114 (542)
Q Consensus 49 ~~~VvI---G~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP~~~~av~~~~~~~GImITASHN 114 (542)
+++|++ +.|..--+ .+.++..|..+|++|+..+. -+|...+.-+++..+++ .|.||++-.
T Consensus 18 k~rvvia~~~~D~HdiG---~~~va~~l~~~G~eV~~LG~--~~p~e~~v~~a~~~~~d-~v~lS~~~~ 80 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRG---AKVVARALRDAGFEVVYTGL--RQTPEQVAMAAVQEDVD-VIGVSILNG 80 (161)
T ss_dssp SCEEEEEEESSSSCCHH---HHHHHHHHHHTTCEEECCCS--BCCHHHHHHHHHHTTCS-EEEEEESSS
T ss_pred CCEEEEEECCCCHHHHH---HHHHHHHHHHCCCEEEECCC--CCCHHHHHHHHHHCCCC-EEEEECCCC
T ss_conf 98799980498624788---99999999978988997897--78999999999866998-999855766
No 19
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix bundle (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=49.08 E-value=10 Score=15.66 Aligned_cols=17 Identities=12% Similarity=-0.122 Sum_probs=9.1
Q ss_pred CCCHHHHHHHHHHHHHC
Q ss_conf 75167899999999724
Q gi|254781107|r 375 KDGIWSILFWLNILAVR 391 (542)
Q Consensus 375 kDgi~aal~~le~la~~ 391 (542)
+|+..+.-++-++++.+
T Consensus 229 ~da~~av~~a~~l~~~~ 245 (258)
T 2i2x_B 229 EEAADAPKIADAIIAGT 245 (258)
T ss_dssp SSTTHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHCCC
T ss_conf 79999999999997564
No 20
>3ne8_A N-acetylmuramoyl-L-alanine amidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.24A {Bartonella henselae}
Probab=42.64 E-value=9 Score=16.08 Aligned_cols=12 Identities=25% Similarity=0.351 Sum_probs=10.7
Q ss_pred CCCEEEEEECCC
Q ss_conf 784699850355
Q gi|254781107|r 203 FGFRIDIDCMNA 214 (542)
Q Consensus 203 ~~l~IvvD~~nG 214 (542)
..++|++||+||
T Consensus 3 ~~~~IvIDpGHG 14 (234)
T 3ne8_A 3 ASFRVVLDPGHG 14 (234)
T ss_dssp CCEEEEEEECCB
T ss_pred CCEEEEECCCCC
T ss_conf 972999869999
No 21
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=41.30 E-value=14 Score=14.89 Aligned_cols=71 Identities=14% Similarity=0.099 Sum_probs=48.4
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCEEE-EECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCC
Q ss_conf 899964767868999999999997898799-9678980650799999985089817999576579898877735873687
Q gi|254781107|r 52 LVVGGDGRFYNHIVIQKIIKIAAANGFARI-IIGKGGILSTPAVSHLIRKYKASGGIILTASHNPAGATQDFGIKYNTSS 130 (542)
Q Consensus 52 VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~-~~~~~gi~PTP~~~~av~~~~~~~GImITASHNP~eyN~dnGiK~~~~~ 130 (542)
|+|-+|.| +||+.+-.-|...|..|- ++....+-.|.+++-. ...|+--+|+||-.|- . .+-+-+.--.
T Consensus 14 Ivvnk~~~----~YAe~Ie~rL~~~gl~vd~lf~n~dv~l~~aL~~v-s~~G~~yaIlVt~qn~--~---~~S~TvnIL~ 83 (130)
T 1v95_A 14 IVVNKQTK----DYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDV-SRGGSPFAIVITQQHQ--I---HRSCTVNIMF 83 (130)
T ss_dssp EESSSGGG----HHHHHHHHHHHTTTCCEEEEECTTSSCHHHHHHHH-HHHTCSEEEEECHHHH--H---HTEEEEEECS
T ss_pred EEECCCCC----HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH-HHCCCCEEEEEECCCH--H---HCCEEEEECC
T ss_conf 99877544----37899999999759778898358756499999988-7579836999812406--5---4546751002
Q ss_pred CC
Q ss_conf 86
Q gi|254781107|r 131 GG 132 (542)
Q Consensus 131 G~ 132 (542)
|.
T Consensus 84 g~ 85 (130)
T 1v95_A 84 GT 85 (130)
T ss_dssp SS
T ss_pred CC
T ss_conf 78
No 22
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=37.70 E-value=16 Score=14.54 Aligned_cols=93 Identities=9% Similarity=0.031 Sum_probs=53.2
Q ss_pred HHHHHHHHCCCCCCCEEEEECCC---C-CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECC
Q ss_conf 99999975465488389996476---7-8689999999999978987999678980650799999985089817999576
Q gi|254781107|r 37 FIQAIFNNVDCAEKTLVVGGDGR---F-YNHIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASGGIILTAS 112 (542)
Q Consensus 37 ~~~ai~~~~~~~~~~VvIG~D~R---~-~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP~~~~av~~~~~~~GImITAS 112 (542)
.++++.++.+..+.||++..-.. + ..+.++..+.......++.|.+--|.| .+.-......+.+.. .|||-+|
T Consensus 30 ~~~avi~AAe~~~sPvIlq~~~~~~~~~~~~~~~~~~~~~a~~~~VPV~lHlDH~--~~~e~i~~ai~~Gft-SVMiD~S 106 (286)
T 1gvf_A 30 TIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHH--ESLDDIRRKVHAGVR-SAMIDGS 106 (286)
T ss_dssp HHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEE--CCHHHHHHHHHTTCC-EEEECCT
T ss_pred HHHHHHHHHHHHCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCC--CCHHHHHHHHHCCCC-EEEEECC
T ss_conf 9999999999969998998677788567899999999999873699889876536--887899998616886-4876489
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 579898877735873687865786798899999974
Q gi|254781107|r 113 HNPAGATQDFGIKYNTSSGGSASEQQTEDIFEESKK 148 (542)
Q Consensus 113 HNP~eyN~dnGiK~~~~~G~~~~~~~~~~I~~~~~~ 148 (542)
|-|-+.| -..++++.+.+..
T Consensus 107 ~l~~eeN----------------i~~Tk~vv~~ah~ 126 (286)
T 1gvf_A 107 HFPFAEN----------------VKLVKSVVDFCHS 126 (286)
T ss_dssp TSCHHHH----------------HHHHHHHHHHHHH
T ss_pred CCCHHHH----------------HHHHHHHHHHHHH
T ss_conf 8999999----------------9999999999986
No 23
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=30.70 E-value=20 Score=13.81 Aligned_cols=59 Identities=7% Similarity=0.037 Sum_probs=34.9
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 8389996476786899999999999789879996789806507999999850898179995765
Q gi|254781107|r 50 KTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIGKGGILSTPAVSHLIRKYKASGGIILTASH 113 (542)
Q Consensus 50 ~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~~~gi~PTP~~~~av~~~~~~~GImITASH 113 (542)
.+|+| ||+..+ +...+..|...|++|+.+.-..+.|+|........++...+|++|..+
T Consensus 2 ~~Ili---tRp~~~--~~~l~~~L~~~G~~~~~~Pli~i~~~~~~~~~l~~l~~~d~iIftS~~ 60 (240)
T 3mw8_A 2 MKLLL---TRPEGK--NAAMASALDALAIPYLVEPLLSVEAAAVTQAQLDELSRADILIFISTS 60 (240)
T ss_dssp CCEEE---CSCTTS--CHHHHHHHHHHTCCEEECCSCEEEECCCCHHHHHHHTTCSEEEECSHH
T ss_pred CEEEE---ECCHHH--HHHHHHHHHHCCCCEEEECCEEEEECCCHHHHHHHHCCCCEEEEECHH
T ss_conf 79999---085788--899999999889959994776667240309998520248999998889
No 24
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2a str} SCOP: c.23.5.4
Probab=29.96 E-value=21 Score=13.73 Aligned_cols=25 Identities=4% Similarity=-0.074 Sum_probs=10.6
Q ss_pred CCEEEEEC-CCCCCCCHHHHHHHHHHH
Q ss_conf 74568853-887227465999999999
Q gi|254781107|r 279 GDRSMILG-KGIFVNPSDSLAIMVANA 304 (542)
Q Consensus 279 aDR~~ivd-~g~~i~~~d~l~ll~~~~ 304 (542)
+|-++|+. +...-.++ .+--++.++
T Consensus 124 ADglIi~TPEYngsipg-~LKN~IDwl 149 (279)
T 2fzv_A 124 SEGQVWCSPERHGQITS-VMKAQIDHL 149 (279)
T ss_dssp CSEEEEEEEEETTEECH-HHHHHHHHS
T ss_pred CCCEEEECCCCCCCCCH-HHHHHHHHC
T ss_conf 89069966001565799-999889860
No 25
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=29.05 E-value=21 Score=13.63 Aligned_cols=23 Identities=22% Similarity=0.166 Sum_probs=10.6
Q ss_pred CCHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 104788861225860789864887
Q gi|254781107|r 256 AKDLYDRMMMHDSADFGAACDGDG 279 (542)
Q Consensus 256 ~~~l~~~~~~~~~aDlgiA~DgDa 279 (542)
+..++.. +.+..++.||.+.|=|
T Consensus 47 a~~~a~~-v~~~~~~~GIliCGtG 69 (149)
T 2vvr_A 47 ASQVALA-VAGGEVDGGILICGTG 69 (149)
T ss_dssp HHHHHHH-HHTTSSSEEEEEESSS
T ss_pred HHHHHHH-HCCCCCCEEEEECCCC
T ss_conf 9999998-6057754258955898
No 26
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=27.48 E-value=23 Score=13.46 Aligned_cols=18 Identities=28% Similarity=0.506 Sum_probs=10.6
Q ss_pred EEEECCCCCCCCCCCCCEEE
Q ss_conf 99957657989887773587
Q gi|254781107|r 107 IILTASHNPAGATQDFGIKY 126 (542)
Q Consensus 107 ImITASHNP~eyN~dnGiK~ 126 (542)
|+=|=-|+|.-|-| |+.|
T Consensus 33 v~~~~phd~~~ftq--GL~~ 50 (262)
T 3nol_A 33 IVHSYPHDTKAFTE--GFFY 50 (262)
T ss_dssp EEEEEECCTTCEEE--EEEE
T ss_pred EEEECCCCCCCCCC--EEEE
T ss_conf 98978899976675--5998
No 27
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=26.83 E-value=23 Score=13.38 Aligned_cols=36 Identities=19% Similarity=-0.074 Sum_probs=28.0
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 883899964767868999999999997898799967
Q gi|254781107|r 49 EKTLVVGGDGRFYNHIVIQKIIKIAAANGFARIIIG 84 (542)
Q Consensus 49 ~~~VvIG~D~R~~S~~~a~~~a~~l~~~Gi~V~~~~ 84 (542)
+++|+|-|-++=+++.+++++++++.+.|+.|.++.
T Consensus 4 ~~kvliiy~S~GnT~~la~ai~~Ga~~~G~ev~~~~ 39 (199)
T 2zki_A 4 KPNILVLFYGYGSIVELAKEIGKGAEEAGAEVKIRR 39 (199)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 986999981835899999999998876498899997
No 28
>1o1x_A Ribose-5-phosphate isomerase RPIB; TM1080, structural genomics, JCSG, PSI, protein structure initiative; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=26.11 E-value=24 Score=13.30 Aligned_cols=67 Identities=22% Similarity=0.198 Sum_probs=28.3
Q ss_pred CCCEEEEEECCCCCHHH---HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 78469985035544012---211123105850123320157875476446854222104788861225860789864887
Q gi|254781107|r 203 FGFRIDIDCMNAVTGPY---AKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDG 279 (542)
Q Consensus 203 ~~l~IvvD~~nGa~~~~---~~~il~~~lg~~~~~~~~~~pd~~F~~~~PnP~~~~~~~l~~~~~~~~~aDlgiA~DgDa 279 (542)
..+||++-+=|. |... +...| +..|..+..+ -+..+-+.-+| ..+..++..+ .+..+|.||.+.|=|
T Consensus 11 ~~MKI~igsDHa-G~~lK~~l~~~L-~~~g~ev~D~---G~~~~~~~DYp----d~a~~va~~V-~~~~~~~GIliCGtG 80 (155)
T 1o1x_A 11 HHVKIAIASDHA-AFELKEKVKNYL-LGKGIEVEDH---GTYSEESVDYP----DYAKKVVQSI-LSNEADFGILLCGTG 80 (155)
T ss_dssp CCCEEEEEECST-THHHHHHHHHHH-HHTTCEEEEC---CCCSSSCCCHH----HHHHHHHHHH-HTTSCSEEEEEESSS
T ss_pred CCEEEEEEECCH-HHHHHHHHHHHH-HHCCCEEEEC---CCCCCCCCCCH----HHHHHHHHHH-HCCCCCEEEEECCCC
T ss_conf 763999974871-799999999999-9879989978---99987777831----7899999997-347763479964898
No 29
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=24.58 E-value=26 Score=13.12 Aligned_cols=33 Identities=12% Similarity=0.177 Sum_probs=19.8
Q ss_pred EEEEECCCCCH--HHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 89996476786--8999999999997898799967
Q gi|254781107|r 52 LVVGGDGRFYN--HIVIQKIIKIAAANGFARIIIG 84 (542)
Q Consensus 52 VvIG~D~R~~S--~~~a~~~a~~l~~~Gi~V~~~~ 84 (542)
++|..=.|..| ..+++.+++.+...|++|.+++
T Consensus 38 l~i~GS~R~~S~~~~La~~~~~~l~~~g~ev~iid 72 (247)
T 2q62_A 38 LILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFD 72 (247)
T ss_dssp EEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 99979999988899999999998876798799975
No 30
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=23.72 E-value=27 Score=13.02 Aligned_cols=18 Identities=33% Similarity=0.355 Sum_probs=8.7
Q ss_pred EEEEECCCCCCCCCCCCCEE
Q ss_conf 79995765798988777358
Q gi|254781107|r 106 GIILTASHNPAGATQDFGIK 125 (542)
Q Consensus 106 GImITASHNP~eyN~dnGiK 125 (542)
-|+=|=.|+|..|-| |+-
T Consensus 44 ~v~~~~phd~~aFtq--GL~ 61 (268)
T 3nok_A 44 HIIREYPHATNAFTQ--GLV 61 (268)
T ss_dssp EEEEEEECCTTCCEE--EEE
T ss_pred EEEEEECCCCHHCCC--CEE
T ss_conf 797960689122476--269
No 31
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi strain cl brener} PDB: 3k7s_A* 3k7o_A* 3k8c_A*
Probab=22.93 E-value=28 Score=12.92 Aligned_cols=67 Identities=19% Similarity=0.206 Sum_probs=28.7
Q ss_pred CEEEEEECCCCCHH---HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 46998503554401---2211123105850123320157875476446854222104788861225860789864887
Q gi|254781107|r 205 FRIDIDCMNAVTGP---YAKEILERKLGAPTGSVRNFIPLEDFGGCHPDPNLIHAKDLYDRMMMHDSADFGAACDGDG 279 (542)
Q Consensus 205 l~IvvD~~nGa~~~---~~~~il~~~lg~~~~~~~~~~pd~~F~~~~PnP~~~~~~~l~~~~~~~~~aDlgiA~DgDa 279 (542)
.||++-+=|. |.. .+...| +..|.++..+ .+-+..+-+.-+|+ .+..++. .+.+..+|.||.+.|=|
T Consensus 23 kkI~IgsDHa-G~~lK~~l~~~L-~~~g~ev~D~-~~G~~~~~~~DYpd----~a~~va~-~V~~~~~~~GIliCGtG 92 (179)
T 3k7p_A 23 RRVAIGTDHP-AFAIHENLILYV-KEAGDEFVPV-YCGPKTAESVDYPD----FASRVAE-MVARKEVEFGVLAAGSG 92 (179)
T ss_dssp EEEEEEECTG-GGGGHHHHHHHH-HHTCTTEEEE-ECSCSSSSCCCHHH----HHHHHHH-HHHTTSSSEEEEEESSS
T ss_pred CCEEEEECCH-HHHHHHHHHHHH-HHCCCEEEEC-CCCCCCCCCCCCHH----HHHHHHH-HHHHCCCEEEEEECCCC
T ss_conf 8189982862-899999999999-9869979975-88777456678378----9999999-98740440689966996
No 32
>1pya_B Pyruvoyl-dependent histidine decarboxylase (L- histidine carboxylase); carboxy-lyase; 2.50A {Lactobacillus SP} SCOP: d.155.1.1 PDB: 1hq6_B 1ibu_B 1ibt_B 1ibv_B* 1ibw_B*
Probab=21.42 E-value=6.2 Score=17.11 Aligned_cols=65 Identities=15% Similarity=0.249 Sum_probs=36.7
Q ss_pred EEEEEECCCCCEEEEECC-CCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHH
Q ss_conf 078986488745688538-8722746599999999987202047871687531083799998404761599828632665
Q gi|254781107|r 270 DFGAACDGDGDRSMILGK-GIFVNPSDSLAIMVANAGLIPGYATGLVGVARSMPTSAALDRVAEKLNLKLFETPTGWKFF 348 (542)
Q Consensus 270 DlgiA~DgDaDR~~ivd~-g~~i~~~d~l~ll~~~~~~~~~~~~~~~~vv~t~~sS~~i~~ia~~~g~~~~~t~vGfk~I 348 (542)
-|.|+-|.+-|-.++++. |.+=++++- =+.+|+..+++ .|+++++ +-.+..++.+.|+-+||||.
T Consensus 100 aisi~~dr~~~A~lFiEDAG~w~~~ne~--el~~~L~~~rk------~ia~Siv------~CG~Dq~v~y~ri~IGfay~ 165 (229)
T 1pya_B 100 AISFAKDPTKDSSMFVEDAGVWETPNED--ELLEYLEGRRK------AMAKSIA------ECGQDAHASFESSWIGFAYT 165 (229)
T ss_dssp EEEEESSTTTSCBEEEEEEEEECSSCHH--HHHHHHHHHHH------HHHHHHH------HHHHHHTCCEEEEEEEEEEE
T ss_pred EEEEECCCCCCCCEEEECCCCCCCCCHH--HHHHHHHHHHH------HHHHHHH------HHCCCCCCEEEEEEEEEEEE
T ss_conf 9986137776751476216734799879--99999999999------9999999------85466784477788777888
No 33
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=20.90 E-value=30 Score=12.65 Aligned_cols=15 Identities=40% Similarity=0.694 Sum_probs=5.9
Q ss_pred EEEECCCCCEEEEEC
Q ss_conf 898648874568853
Q gi|254781107|r 272 GAACDGDGDRSMILG 286 (542)
Q Consensus 272 giA~DgDaDR~~ivd 286 (542)
|||+||+.+|+-|-+
T Consensus 208 GIA~d~~~~~l~VTG 222 (243)
T 3mbr_X 208 GIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEECCCCCEEEEEE
T ss_conf 898828999899996
No 34
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, complex with N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=20.14 E-value=26 Score=13.09 Aligned_cols=29 Identities=17% Similarity=0.217 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999999998506688378999
Q gi|254781107|r 510 KNTQEMLSDLVEVSQRISCLRHYIGHTNP 538 (542)
Q Consensus 510 ~~~~~~l~~li~~~~~~~~~~~~~~~~~~ 538 (542)
+++...++.|++...++.++.---|+.+|
T Consensus 429 ed~~~g~~VL~~~~l~~d~~~~~~~~~~~ 457 (474)
T 2v8h_A 429 EEIENGFKVLLQAIINYDNYRVIRGHQFP 457 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999998413454256188
Done!