HHsearch alignment for GI: 254781108 and conserved domain: KOG2353
>KOG2353 consensus.
Probab=98.73 E-value=1.1e-07 Score=64.56 Aligned_cols=187 Identities=18% Similarity=0.270 Sum_probs=118.5
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHH
Q ss_conf 22223455654313575055666666766631012331023012688765403101343220112555333410002456
Q gi|254781108|r 138 IIERSSENLAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESA 217 (398)
Q Consensus 138 ~~~~~~~~~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 217 (398)
T Consensus 216 ~Wyi~aAt~pKdiviLlD~SgSm~g~---------------------------------------------~~~lak~tv 250 (1104)
T KOG2353 216 SWYIQAATSPKDIVILLDVSGSMSGL---------------------------------------------RLDLAKQTV 250 (1104)
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCCH---------------------------------------------HHHHHHHHH
T ss_conf 53000467866459999656555443---------------------------------------------169999999
Q ss_pred HHHHHHHHHCCCCCCCCCEEEEEEECCC------CCC-CCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 6554102202768776521346541267------765-431123568999999997357788874458899999996113
Q gi|254781108|r 218 GNLVNSIQKAIQEKKNLSVRIGTIAYNI------GIV-GNQCTPLSNNLNEVKSRLNKLNPYENTNTYPAMHHAYRELYN 290 (398)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~lt~~~~~~~~~I~~l~~~G~T~~~~gl~~a~~~l~~ 290 (398)
T Consensus 251 ~~iLdtLs~~Df------vn--i~tf~~~~~~v~pc~~~~lvqAt~~nk~~~~~~i~~l~~k~~a~~~~~~e~aF~lL~~ 322 (1104)
T KOG2353 251 NEILDTLSDNDF------VN--ILTFNSEVNPVSPCFNGTLVQATMRNKKVFKEAIETLDAKGIANYTAALEYAFSLLRD 322 (1104)
T ss_pred HHHHHHCCCCCE------EE--EEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999976154776------87--8762135675652025852204567799999998641412541243557789999987
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH-H-HCCCEEEEEEECCCCC--HHHHHHHHHCCCCC
Q ss_conf 466666566766665169981588778777776631489999999-9-7898899999547975--58999998519981
Q gi|254781108|r 291 EKESSHNTIGSTRLKKFVIFITDGENSGASAYQNTLNTLQICEYM-R-NAGMKIYSVAVSAPPE--GQDLLRKCTDSSGQ 366 (398)
Q Consensus 291 ~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~c~~~-K-~~gi~IytIg~~~~~~--~~~~l~~cAs~~~~ 366 (398)
T Consensus 323 ~n~s~~~~~~~-~C~~~iml~tdG~~~~~~---------~If~~yn~~~~~Vrvftflig~~~~~~~~~~wmac~n-~gy 391 (1104)
T KOG2353 323 YNDSRANTQRS-PCNQAIMLITDGVDENAK---------EIFEKYNWPDKKVRVFTFLIGDEVYDLDEIQWMACAN-KGY 391 (1104)
T ss_pred HCCCCCCCCCC-CCCEEEEEEECCCCCCHH---------HHHHHHCCCCCCEEEEEEEECCCCCCCCCCHHHHHHC-CCC
T ss_conf 44455443225-001045776247751089---------9998603677735999999244213454121225407-885
Q ss_pred EEEECCHHHHHHHHHHHHHHHH
Q ss_conf 8994698999999999999875
Q gi|254781108|r 367 FFAVNDSRELLESFDKITDKIQ 388 (398)
Q Consensus 367 yy~a~~~~~L~~aF~~I~~~i~ 388 (398)
T Consensus 392 y~~I~~~~~v~~~~~~y~~vls 413 (1104)
T KOG2353 392 YVHIISIADVRENVLEYLDVLS 413 (1104)
T ss_pred EEECCCHHHCCHHHHHHHHHHC
T ss_conf 5864665645867655664532