HHsearch alignment for GI: 254781108 and conserved domain: PRK13685
>PRK13685 hypothetical protein; Provisional.
Probab=99.92 E-value=4.9e-23 Score=156.59 Aligned_cols=195 Identities=18% Similarity=0.302 Sum_probs=150.5
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 54313575055666666766631012331023012688765403101343220112555333410002456655410220
Q gi|254781108|r 147 AISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQK 226 (398)
Q Consensus 147 ~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 226 (398)
T Consensus 88 ~~~i~l~lD~S~SM~a~D~----------------------------------------~p~Rl~~ak~~~~~fi~~~~~ 127 (326)
T PRK13685 88 RAVVMLVIDVSQSMRATDV----------------------------------------EPNRLAAAQEAAKQFADQLTP 127 (326)
T ss_pred CCCEEEEEECCCCCCCCCC----------------------------------------CCCHHHHHHHHHHHHHHHCCC
T ss_conf 8867999989756558788----------------------------------------956899999999999973798
Q ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf 27687765213465412677654311235689999999973577888744588999999961134666665667666651
Q gi|254781108|r 227 AIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNKLNPYENTNTYPAMHHAYRELYNEKESSHNTIGSTRLKK 306 (398)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~~~k 306 (398)
T Consensus 128 --------~driGlv~Fa~~a--~~~~plT~D~~~~~~~l~~l~~~~~taiG~ai~~Al~~l~~~~~~~--~~~~~~~~~ 195 (326)
T PRK13685 128 --------GINLGLIAFAGTA--TVLVSPTTNREATKNALDKLQLADRTATGEGIFTALQAIATVGAVI--GGGDTPPPA 195 (326)
T ss_pred --------CCEEEEEEECCCC--EECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC--CCCCCCCCC
T ss_conf --------8828999965872--0148987539999999984687888864068999999998633201--456777886
Q ss_pred EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCC-------------CHHHHHHHHHC-CCCCEEEECC
Q ss_conf 699815887787777766314899999999789889999954797-------------55899999851-9981899469
Q gi|254781108|r 307 FVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPP-------------EGQDLLRKCTD-SSGQFFAVND 372 (398)
Q Consensus 307 ~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~-------------~~~~~l~~cAs-~~~~yy~a~~ 372 (398)
T Consensus 196 ~IILLTDG~~n~g~~~~~p~~~~~AA~~A~~~gi~IyTIgvGt~~g~~~~~g~~~~~~lDe~~L~~IA~~TGG~yfrA~d 275 (326)
T PRK13685 196 RIVLFSDGKETVPTNPDNPKGAYTAARTAKDQGVPISTISFGTPYGFVEINGQRQPVPVDDETLKKIAQLSGGEFYTAAS 275 (326)
T ss_pred EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCC
T ss_conf 79997489977788988730299999999985994899997799884354784034568999999999972987997199
Q ss_pred HHHHHHHHHHHHHHHHHCEEE
Q ss_conf 899999999999987512457
Q gi|254781108|r 373 SRELLESFDKITDKIQEQSVR 393 (398)
Q Consensus 373 ~~~L~~aF~~I~~~i~~~r~~ 393 (398)
T Consensus 276 ~~~L~~Iy~~i~~~i~~~~~~ 296 (326)
T PRK13685 276 LEELRAVYATLQQQIGYETIK 296 (326)
T ss_pred HHHHHHHHHHHHHHHCCEEEC
T ss_conf 999999999963331603311