HHsearch alignment for GI: 254781108 and conserved domain: TIGR02442

>TIGR02442 Cob-chelat-sub cobaltochelatase subunit; InterPro: IPR012804 Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in Salmonella typhimurium) , . The corresponding cobalt chelatases are not homologous. Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (IPR010388 from INTERPRO). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis, (IPR011953 from INTERPRO, IPR006537 from INTERPRO, IPR006538 from INTERPRO) . The two pathways differ in the point of cobalt insertion during corrin ring formation . There are apparently a number of variations on these two pathways, where the major differences seem to be concerned with the process of ring contraction . Cobaltochelatase shows similarities with magnesium chelatase, which is also a complex ATP-dependent enzyme made up of two separable components. However, unlike the situation in cobaltochelatase, one of these two components is membrane bound in magnesium chelatase . .
Probab=98.76  E-value=1.2e-07  Score=64.28  Aligned_cols=165  Identities=17%  Similarity=0.176  Sum_probs=116.9

Q ss_pred             CCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             54313575055666666766631012331023012688765403101343220112555333410002456655410220
Q gi|254781108|r  147 AISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQK  226 (398)
Q Consensus       147 ~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  226 (398)
T Consensus       508 G~LviFvVDASGSM~ar~--------------------------------------------RM~~~KGavLsLL~DA--  541 (688)
T TIGR02442       508 GNLVIFVVDASGSMAARG--------------------------------------------RMAAAKGAVLSLLRDA--  541 (688)
T ss_pred             CCCEEEEEECCHHHHHHH--------------------------------------------HHHHHHHHHHHHHHHH--
T ss_conf             152223533532044235--------------------------------------------7899899999988888--


Q ss_pred             CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf             27687765213465412677654311235689999999973577888744588999999961134666665667666651
Q gi|254781108|r  227 AIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNKLNPYENTNTYPAMHHAYRELYNEKESSHNTIGSTRLKK  306 (398)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~~~k  306 (398)
T Consensus       542 -----Yq~RDkValI~Fr-G~~AevlLPPT~sv~~A~r~L~~lPtGGrTPLa~gL~~A~~v~~~~~~~~------~~~~p  609 (688)
T TIGR02442       542 -----YQKRDKVALITFR-GEEAEVLLPPTSSVELAARRLEELPTGGRTPLAAGLLKAAEVLSNELLRD------DDRRP  609 (688)
T ss_pred             -----HHHCCEEEEEECC-CCEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC------CCCCE
T ss_conf             -----8627768886236-73435765878848999999972889898745899999999999986116------89942


Q ss_pred             EEEECCCCCCCCCC---CCCC--CHHHHHHHHHHHHC-------CCEEEEEEECC-CCCHHHHHHHHHCC-CCCEEE
Q ss_conf             69981588778777---7766--31489999999978-------98899999547-97558999998519-981899
Q gi|254781108|r  307 FVIFITDGENSGAS---AYQN--TLNTLQICEYMRNA-------GMKIYSVAVSA-PPEGQDLLRKCTDS-SGQFFA  369 (398)
Q Consensus       307 ~iillTDG~~~~~~---~~~~--~~~~~~~c~~~K~~-------gi~IytIg~~~-~~~~~~~l~~cAs~-~~~yy~  369 (398)
T Consensus       610 l~V~iTDGRaNv~L~~~~g~~qp~~~~~~~a~~L~~~~~R~R~Lg~~~vV~DTE~~~~v~lGlA~~~A~~lgg~~~~  686 (688)
T TIGR02442       610 LVVVITDGRANVALDVSLGEPQPLDDARTIASKLAARASRIRSLGIKFVVIDTENPGFVRLGLAEDLASALGGEYLR  686 (688)
T ss_pred             EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEC
T ss_conf             89987078635426667888415778999999988750430111622789972688754222389999982983224