HHsearch alignment for GI: 254781108 and conserved domain: cd01464

>cd01464 vWA_subfamily VWA subfamily: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if
Probab=99.61  E-value=2.7e-14  Score=104.11  Aligned_cols=173  Identities=20%  Similarity=0.242  Sum_probs=115.9

Q ss_pred             CCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             54313575055666666766631012331023012688765403101343220112555333410002456655410220
Q gi|254781108|r  147 AISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQK  226 (398)
Q Consensus       147 ~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  226 (398)
T Consensus         3 rlpvvlvlD~SGSM~G~---------------------------------------------~i~~~k~al~~~~~~L~~   37 (176)
T cd01464           3 RLPIYLLLDTSGSMAGE---------------------------------------------PIEALNQGLQMLQSELRQ   37 (176)
T ss_pred             CCCEEEEEECCCCCCCH---------------------------------------------HHHHHHHHHHHHHHHHHC
T ss_conf             35789999789999984---------------------------------------------799999999999999711


Q ss_pred             CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf             27687765213465412677654311235689999999973577888744588999999961134666665667666651
Q gi|254781108|r  227 AIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNKLNPYENTNTYPAMHHAYRELYNEKESSHNTIGSTRLKK  306 (398)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~~~k  306 (398)
T Consensus        38 d~~--a~~~~~vsVItF~s~a~--~~~pl~~-~~--~~~~~~L~a~G~T~~g~al~~a~~~l~~~~~~~~-~~~~~~~~P  109 (176)
T cd01464          38 DPY--ALESVEISVITFDSAAR--VIVPLTP-LE--SFQPPRLTASGGTSMGAALELALDCIDRRVQRYR-ADQKGDWRP  109 (176)
T ss_pred             CCC--CHHEEEEEEEEECCCEE--EECCCCC-HH--HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCE
T ss_conf             831--01132699999789517--8058634-76--6475547778998199999999999998652236-556677531


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHH
Q ss_conf             699815887787777766314899999999789889999954797558999998519981899469899999999
Q gi|254781108|r  307 FVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPPEGQDLLRKCTDSSGQFFAVNDSRELLESFD  381 (398)
Q Consensus       307 ~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~~~~~~l~~cAs~~~~yy~a~~~~~L~~aF~  381 (398)
T Consensus       110 ~I~LlTDG~PtD~-~----~~~~~~~~~~~~~~~~i~a~giG~d-ad~~~L~~is~~---~~~~~~~~~f~~ff~  175 (176)
T cd01464         110 WVFLLTDGEPTDD-L----TAAIERIKEARDSKGRIVACAVGPK-ADLDTLKQITEG---VPLLDDALSGLNFFK  175 (176)
T ss_pred             EEEEECCCCCCCC-H----HHHHHHHHHHHHCCCEEEEEEEECC-CCHHHHHHHHCC---CCCCCCHHHHHHHHC
T ss_conf             7999668998875-8----9999999988863976999997387-189999988577---745345345888508