HHsearch alignment for GI: 254781108 and conserved domain: pfam00092

Probab=99.66  E-value=1.4e-14  Score=105.85  Aligned_cols=172  Identities=21%  Similarity=0.281  Sum_probs=120.1

Q ss_pred             CCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             31357505566666676663101233102301268876540310134322011255533341000245665541022027
Q gi|254781108|r  149 SICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQKAI  228 (398)
Q Consensus       149 di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  228 (398)
T Consensus         1 Di~fvlD~S~Sm~~~---------------------------------------------~~~~~k~~~~~~i~~~~~--   33 (177)
T pfam00092         1 DIVFLLDGSGSIGEA---------------------------------------------NFEKVKEFIKKLVENLDI--   33 (177)
T ss_pred             CEEEEEECCCCCCHH---------------------------------------------HHHHHHHHHHHHHHHHCC--
T ss_conf             989999687998868---------------------------------------------899999999999998365--


Q ss_pred             CCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH--CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf             687765213465412677654311235689999999973--577888744588999999961134666665667666651
Q gi|254781108|r  229 QEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLN--KLNPYENTNTYPAMHHAYRELYNEKESSHNTIGSTRLKK  306 (398)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~--~l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~~~k  306 (398)
T Consensus        34 ---~~~~~rv~lv~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~t~~~~al~~a~~~~~~~~~~------r~~~~k  104 (177)
T pfam00092        34 ---GPDGTRVGLVQYSSDVTTEFSLNDYKSKDDLLSAVLRNIYYLGGGTNTGKALKYALENLFRSAGS------RPNAPK  104 (177)
T ss_pred             ---CCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC------CCCCEE
T ss_conf             ---88752899999458458996178868999999998643157899565999999999998635478------878726


Q ss_pred             EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCC---CCCEEEECCHHHHHHHHHHH
Q ss_conf             699815887787777766314899999999789889999954797558999998519---98189946989999999999
Q gi|254781108|r  307 FVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPPEGQDLLRKCTDS---SGQFFAVNDSRELLESFDKI  383 (398)
Q Consensus       307 ~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~~~~~~l~~cAs~---~~~yy~a~~~~~L~~aF~~I  383 (398)
T Consensus       105 ~vvllTDG~~~~~~~-----~~~~~~~~~~~~gI~v~~vG~g-~-~~~~~L~~ia~~~~~~~~~~~~~~~~~l~~~~~~i  177 (177)
T pfam00092       105 VVILLTDGKSNDGGL-----VPAAAAALRRKVGIIVFGVGVG-D-VDEEELRLIASEPCSEGHVFYVTDFDALSDIQEEL  177 (177)
T ss_pred             EEEEEECCCCCCCCC-----CHHHHHHHHHHCCCEEEEEECC-C-CCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHC
T ss_conf             899983698788864-----6999999999789589999747-4-48999999968999898599958989999999619