HHsearch alignment for GI: 254781108 and conserved domain: pfam06707
>pfam06707 DUF1194 Protein of unknown function (DUF1194). This family consists of several hypothetical Rhizobiales specific proteins of around 270 residues in length. The function of this family is unknown.
Probab=97.11 E-value=0.018 Score=33.20 Aligned_cols=141 Identities=16% Similarity=0.180 Sum_probs=83.9
Q ss_pred CEEEEEEECCCCCCCCCCCCCC--CCHHH---HHHHHHCCC--CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf 2134654126776543112356--89999---999973577--8887445889999999611346666656676666516
Q gi|254781108|r 235 SVRIGTIAYNIGIVGNQCTPLS--NNLNE---VKSRLNKLN--PYENTNTYPAMHHAYRELYNEKESSHNTIGSTRLKKF 307 (398)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~lt--~~~~~---~~~~I~~l~--~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~~~k~ 307 (398)
T Consensus 48 ~Iava~~eWsg~~~q~~vv~Wt~I~~~~da~a~A~~i~~~~r~~~~~Taig~Al~~a~~l~~~~~~--------~~~Rrv 119 (206)
T pfam06707 48 RIAVTYVEWSGPDDQRVVVPWTLIDSAEDAEAFAARLAAAPRRAGRRTAIGGALGFAAALLAQNPY--------ECLRRV 119 (206)
T ss_pred EEEEEEEEECCCCCCEEEECCEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC--------CCCEEE
T ss_conf 189999980278874488699895899999999999975887889997699999999999982998--------761799
Q ss_pred EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCC-----HHHHHHHHHC-CCCCE-EEECCHHHHHHHH
Q ss_conf 998158877877777663148999999997898899999547975-----5899999851-99818-9946989999999
Q gi|254781108|r 308 VIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPPE-----GQDLLRKCTD-SSGQF-FAVNDSRELLESF 380 (398)
Q Consensus 308 iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~~-----~~~~l~~cAs-~~~~y-y~a~~~~~L~~aF 380 (398)
T Consensus 120 IDiSGDG~nN~G~~p~-----~~ard~~~~~GitINgL~I~~~~~~~~~~L~~yy~~~VIgGpgAFV~~a~~~~df~~Ai 194 (206)
T pfam06707 120 IDVSGDGPNNQGFPPV-----TAARDAAVAAGVTINGLAIMGAEAPTSDDLDAYYRDCVIGGPGAFVEPANGFEDFAEAI 194 (206)
T ss_pred EEEECCCCCCCCCCCH-----HHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHH
T ss_conf 9960799888999813-----78987677759289667774789876236999997320238984499738879999999
Q ss_pred H-HHHHHHH
Q ss_conf 9-9999875
Q gi|254781108|r 381 D-KITDKIQ 388 (398)
Q Consensus 381 ~-~I~~~i~ 388 (398)
T Consensus 195 rrKL~rEIa 203 (206)
T pfam06707 195 RRKLVREIA 203 (206)
T ss_pred HHHHHHHHH
T ss_conf 999999873