HHsearch alignment for GI: 254781108 and conserved domain: pfam06707

>pfam06707 DUF1194 Protein of unknown function (DUF1194). This family consists of several hypothetical Rhizobiales specific proteins of around 270 residues in length. The function of this family is unknown.
Probab=97.11  E-value=0.018  Score=33.20  Aligned_cols=141  Identities=16%  Similarity=0.180  Sum_probs=83.9

Q ss_pred             CEEEEEEECCCCCCCCCCCCCC--CCHHH---HHHHHHCCC--CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf             2134654126776543112356--89999---999973577--8887445889999999611346666656676666516
Q gi|254781108|r  235 SVRIGTIAYNIGIVGNQCTPLS--NNLNE---VKSRLNKLN--PYENTNTYPAMHHAYRELYNEKESSHNTIGSTRLKKF  307 (398)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~lt--~~~~~---~~~~I~~l~--~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~~~k~  307 (398)
T Consensus        48 ~Iava~~eWsg~~~q~~vv~Wt~I~~~~da~a~A~~i~~~~r~~~~~Taig~Al~~a~~l~~~~~~--------~~~Rrv  119 (206)
T pfam06707        48 RIAVTYVEWSGPDDQRVVVPWTLIDSAEDAEAFAARLAAAPRRAGRRTAIGGALGFAAALLAQNPY--------ECLRRV  119 (206)
T ss_pred             EEEEEEEEECCCCCCEEEECCEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC--------CCCEEE
T ss_conf             189999980278874488699895899999999999975887889997699999999999982998--------761799


Q ss_pred             EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCC-----HHHHHHHHHC-CCCCE-EEECCHHHHHHHH
Q ss_conf             998158877877777663148999999997898899999547975-----5899999851-99818-9946989999999
Q gi|254781108|r  308 VIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPPE-----GQDLLRKCTD-SSGQF-FAVNDSRELLESF  380 (398)
Q Consensus       308 iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~~-----~~~~l~~cAs-~~~~y-y~a~~~~~L~~aF  380 (398)
T Consensus       120 IDiSGDG~nN~G~~p~-----~~ard~~~~~GitINgL~I~~~~~~~~~~L~~yy~~~VIgGpgAFV~~a~~~~df~~Ai  194 (206)
T pfam06707       120 IDVSGDGPNNQGFPPV-----TAARDAAVAAGVTINGLAIMGAEAPTSDDLDAYYRDCVIGGPGAFVEPANGFEDFAEAI  194 (206)
T ss_pred             EEEECCCCCCCCCCCH-----HHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHH
T ss_conf             9960799888999813-----78987677759289667774789876236999997320238984499738879999999


Q ss_pred             H-HHHHHHH
Q ss_conf             9-9999875
Q gi|254781108|r  381 D-KITDKIQ  388 (398)
Q Consensus       381 ~-~I~~~i~  388 (398)
T Consensus       195 rrKL~rEIa  203 (206)
T pfam06707       195 RRKLVREIA  203 (206)
T ss_pred             HHHHHHHHH
T ss_conf             999999873