HHsearch alignment for GI: 254781108 and conserved domain: pfam11443

>pfam11443 DUF2828 Domain of unknown function (DUF2828). This is a uncharacterized domain found in eukaryotes and viruses.

Probab=90.50  E-value=1.1  Score=22.49  Aligned_cols=103  Identities=15%  Similarity=0.082  Sum_probs=64.1

Q ss_pred             EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf             34654126776543112356899999999735778887445889999999611346666656676666516998158877
Q gi|254781108|r  237 RIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNKLNPYENTNTYPAMHHAYRELYNEKESSHNTIGSTRLKKFVIFITDGEN  316 (398)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~~~k~iillTDG~~  316 (398)
T Consensus       368 k~~~iTFs~~P~~~~l~g--~~l~ekv~~~~~~~wg~nTnf~~vf~lIL~~av~~~------l~~eempk~l~VfSDMqF  439 (524)
T pfam11443       368 KGKVITFSSNPQLHHIKG--DSLREKVSFVRRMPWGMSTNFQKVFDLILETAVENK------LPQEDMPKRLFVFSDMEF  439 (524)
T ss_pred             CCCEEEECCCCEEEECCC--CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC------CCHHHCCCEEEEEECCCH
T ss_conf             581898449975897079--889999999995867635339999999999999869------997886773899845423


Q ss_pred             CCCCCC--CCCHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf             877777--6631489999999978988999995
Q gi|254781108|r  317 SGASAY--QNTLNTLQICEYMRNAGMKIYSVAV  347 (398)
Q Consensus       317 ~~~~~~--~~~~~~~~~c~~~K~~gi~IytIg~  347 (398)
T Consensus       440 D~a~~~~~~~~t~~e~i~~~f~~aGY~~P~IVF  472 (524)
T pfam11443       440 DQASTGTSGWETDYEAIQRKFKEAGYEVPELVF  472 (524)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE
T ss_conf             120379987623899999999983999983889