HHsearch alignment of GI: 254781108 and MMDB domain: 1mf7_A_

>1mf7_A (A:) Integrin alpha M; cell adhesion; 1.25A {Homo sapiens}
Probab=99.50  E-value=2.2e-13  Score=98.32  Aligned_cols=184  Identities=17%  Similarity=0.190  Sum_probs=129.1

Q ss_pred             CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             56543135750556666667666310123310230126887654031013432201125553334100024566554102
Q gi|254781108|r  145 NLAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSI  224 (398)
Q Consensus       145 ~~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  224 (398)
                      ..++|+++|+|.||||...                                             +....+.++..+++.+
T Consensus         3 ~~~~di~fviD~SgSM~~~---------------------------------------------~~~~~k~~~~~~~~~l   37 (194)
T 1mf7_A            3 QEDSDIAFLIDGSGSIIPH---------------------------------------------DFRRMKEFVSTVMEQL   37 (194)
T ss_dssp             CCCEEEEEEEECCTTSCHH---------------------------------------------HHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEEECCCCCCHH---------------------------------------------HHHHHHHHHHHHHHHC
T ss_conf             9881699999388998868---------------------------------------------9999999999999970


Q ss_pred             HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH-HCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             202768776521346541267765431123568999999997-3577888744588999999961134666665667666
Q gi|254781108|r  225 QKAIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRL-NKLNPYENTNTYPAMHHAYRELYNEKESSHNTIGSTR  303 (398)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I-~~l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~  303 (398)
                      ...       ..+.+.+.|..............+...+...+ +...++|+|+.+.++..+.+.+.......+     ..
T Consensus        38 ~~~-------~~~v~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~~~l~~~~~~~~~~~~~~~-----~~  105 (194)
T 1mf7_A           38 KKS-------KTLFSLMQYSEEFRIHFTFKEFQNNPNPRSLVKPITQLLGRTHTATGIRKVVRELFNITNGAR-----KN  105 (194)
T ss_dssp             CCT-------TEEEEEEEESSSEEEEECHHHHHHSCCHHHHHTTCCCCCSCBCHHHHHHHHHHTTTSGGGTCC-----TT
T ss_pred             CCC-------CCEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC-----CC
T ss_conf             768-------836999999621057630455454899999985010135996420799999998864542676-----78


Q ss_pred             CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC---CCHHHHHHHHHCCCC--CEEEECCHHHHHH
Q ss_conf             65169981588778777776631489999999978988999995479---755899999851998--1899469899999
Q gi|254781108|r  304 LKKFVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAP---PEGQDLLRKCTDSSG--QFFAVNDSRELLE  378 (398)
Q Consensus       304 ~~k~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~---~~~~~~l~~cAs~~~--~yy~a~~~~~L~~  378 (398)
                      ..+++||+|||+.+......     ..+.+.+++.+++++.+.+..+   ..+.++|+.+|..++  ++|.+.+.++|.+
T Consensus       106 ~~~~iiliTDG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~~ia~~~~g~~~~~~~~~~~l~~  180 (194)
T 1mf7_A          106 AFKILVVITDGEKFGDPLGY-----EDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNFEALKT  180 (194)
T ss_dssp             SEEEEEEEESSCCBSCSSCG-----GGTHHHHHHTTEEEEEEEESGGGCSHHHHHHHHHHSCSSHHHHEEEESSGGGGGG
T ss_pred             CEEEEEEEECCCCCCCCHHH-----HHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHH
T ss_conf             50389998369988980329-----9999999978999999997887666357999999866998661899389999999


Q ss_pred             HHHHHHHHHHHC
Q ss_conf             999999987512
Q gi|254781108|r  379 SFDKITDKIQEQ  390 (398)
Q Consensus       379 aF~~I~~~i~~~  390 (398)
                      +|++|...|...
T Consensus       181 ~~~~i~~~i~~~  192 (194)
T 1mf7_A          181 IQNQLREKIFCI  192 (194)
T ss_dssp             GHHHHHHHHHTT
T ss_pred             HHHHHHHHHCCC
T ss_conf             999998764027