HHsearch alignment of GI: 254781108 and MMDB domain: 1mf7_A_
>1mf7_A (A:) Integrin alpha M; cell adhesion; 1.25A {Homo sapiens}
Probab=99.50 E-value=2.2e-13 Score=98.32 Aligned_cols=184 Identities=17% Similarity=0.190 Sum_probs=129.1
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 56543135750556666667666310123310230126887654031013432201125553334100024566554102
Q gi|254781108|r 145 NLAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSI 224 (398)
Q Consensus 145 ~~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 224 (398)
..++|+++|+|.||||... +....+.++..+++.+
T Consensus 3 ~~~~di~fviD~SgSM~~~---------------------------------------------~~~~~k~~~~~~~~~l 37 (194)
T 1mf7_A 3 QEDSDIAFLIDGSGSIIPH---------------------------------------------DFRRMKEFVSTVMEQL 37 (194)
T ss_dssp CCCEEEEEEEECCTTSCHH---------------------------------------------HHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEECCCCCCHH---------------------------------------------HHHHHHHHHHHHHHHC
T ss_conf 9881699999388998868---------------------------------------------9999999999999970
Q ss_pred HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH-HCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 202768776521346541267765431123568999999997-3577888744588999999961134666665667666
Q gi|254781108|r 225 QKAIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRL-NKLNPYENTNTYPAMHHAYRELYNEKESSHNTIGSTR 303 (398)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I-~~l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~ 303 (398)
... ..+.+.+.|..............+...+...+ +...++|+|+.+.++..+.+.+.......+ ..
T Consensus 38 ~~~-------~~~v~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~~~~~l~~~~~~~~~~~~~~~-----~~ 105 (194)
T 1mf7_A 38 KKS-------KTLFSLMQYSEEFRIHFTFKEFQNNPNPRSLVKPITQLLGRTHTATGIRKVVRELFNITNGAR-----KN 105 (194)
T ss_dssp CCT-------TEEEEEEEESSSEEEEECHHHHHHSCCHHHHHTTCCCCCSCBCHHHHHHHHHHTTTSGGGTCC-----TT
T ss_pred CCC-------CCEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC-----CC
T ss_conf 768-------836999999621057630455454899999985010135996420799999998864542676-----78
Q ss_pred CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC---CCHHHHHHHHHCCCC--CEEEECCHHHHHH
Q ss_conf 65169981588778777776631489999999978988999995479---755899999851998--1899469899999
Q gi|254781108|r 304 LKKFVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAP---PEGQDLLRKCTDSSG--QFFAVNDSRELLE 378 (398)
Q Consensus 304 ~~k~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~---~~~~~~l~~cAs~~~--~yy~a~~~~~L~~ 378 (398)
..+++||+|||+.+...... ..+.+.+++.+++++.+.+..+ ..+.++|+.+|..++ ++|.+.+.++|.+
T Consensus 106 ~~~~iiliTDG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~~ia~~~~g~~~~~~~~~~~l~~ 180 (194)
T 1mf7_A 106 AFKILVVITDGEKFGDPLGY-----EDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNFEALKT 180 (194)
T ss_dssp SEEEEEEEESSCCBSCSSCG-----GGTHHHHHHTTEEEEEEEESGGGCSHHHHHHHHHHSCSSHHHHEEEESSGGGGGG
T ss_pred CEEEEEEEECCCCCCCCHHH-----HHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHH
T ss_conf 50389998369988980329-----9999999978999999997887666357999999866998661899389999999
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999987512
Q gi|254781108|r 379 SFDKITDKIQEQ 390 (398)
Q Consensus 379 aF~~I~~~i~~~ 390 (398)
+|++|...|...
T Consensus 181 ~~~~i~~~i~~~ 192 (194)
T 1mf7_A 181 IQNQLREKIFCI 192 (194)
T ss_dssp GHHHHHHHHHTT
T ss_pred HHHHHHHHHCCC
T ss_conf 999998764027