HHsearch alignment of GI: 254781108 and MMDB domain: 1n3y_A_
>1n3y_A (A:) Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens}
Probab=99.53 E-value=9e-14 Score=100.64 Aligned_cols=185 Identities=16% Similarity=0.226 Sum_probs=128.7
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 55654313575055666666766631012331023012688765403101343220112555333410002456655410
Q gi|254781108|r 144 ENLAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNS 223 (398)
Q Consensus 144 ~~~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 223 (398)
...++++++|+|.||||... ++...+.++..+++.
T Consensus 6 ~~~~~di~~viD~SgSM~~~---------------------------------------------~~~~~k~~~~~~~~~ 40 (198)
T 1n3y_A 6 SRQEQDIVFLIDGSGSISSR---------------------------------------------NFATMMNFVRAVISQ 40 (198)
T ss_dssp --CCEEEEEEEECCTTSCHH---------------------------------------------HHHHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEECCCCCCHH---------------------------------------------HHHHHHHHHHHHHHH
T ss_conf 78887589999798998989---------------------------------------------999999999999996
Q ss_pred HHHCCCCCCCCCEEEEEEECCCCCCCCCCC-CCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 220276877652134654126776543112-3568999999997357788874458899999996113466666566766
Q gi|254781108|r 224 IQKAIQEKKNLSVRIGTIAYNIGIVGNQCT-PLSNNLNEVKSRLNKLNPYENTNTYPAMHHAYRELYNEKESSHNTIGST 302 (398)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~I~~l~~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~ 302 (398)
+... ..+.+.+.|.......... ............++.+...++|....++..+...+.......+ .
T Consensus 41 l~~~-------~~~~~iv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 108 (198)
T 1n3y_A 41 FQRP-------STQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGAR-----R 108 (198)
T ss_dssp SCTT-------TEEEEEEEESSSEEEEECHHHHHHCSSGGGGGTTCCCCCSCBCHHHHHHHHHTTTTSGGGTCC-----T
T ss_pred CCCC-------CCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHCCCC-----C
T ss_conf 3988-------858999998435220367765110789999998766235997088999999998614310798-----7
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC---CCHHHHHHHHHCCC-C-CEEEECCHHHHH
Q ss_conf 665169981588778777776631489999999978988999995479---75589999985199-8-189946989999
Q gi|254781108|r 303 RLKKFVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAP---PEGQDLLRKCTDSS-G-QFFAVNDSRELL 377 (398)
Q Consensus 303 ~~~k~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~---~~~~~~l~~cAs~~-~-~yy~a~~~~~L~ 377 (398)
..+|++||+|||+.+.... ....+.+.+++.||.+|+|+++.. ......|+..|+.+ | ++|.+.+.++|.
T Consensus 109 ~~~~~iiliTDG~~~~~~~-----~~~~~~~~~~~~~i~i~~i~i~~~~~~~~~~~~l~~ia~~~~g~~~~~~~~~~~l~ 183 (198)
T 1n3y_A 109 DAAKILIVITDGKKEGDSL-----DYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALK 183 (198)
T ss_dssp TSEEEEEEEESSCCBSCSS-----CHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGGG
T ss_pred CCCCEEEEEECCCCCCCHH-----HHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHH
T ss_conf 7630599994589888622-----19999999997898899999777656744599999985699865089828999999
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 9999999987512
Q gi|254781108|r 378 ESFDKITDKIQEQ 390 (398)
Q Consensus 378 ~aF~~I~~~i~~~ 390 (398)
.+|++|.+.|...
T Consensus 184 ~~~~~i~~~l~~v 196 (198)
T 1n3y_A 184 DIQNQLKEKIFAI 196 (198)
T ss_dssp GGHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCC
T ss_conf 9999999875057