HHsearch alignment of GI: 254781108 and MMDB domain: 2vdr_B_110-351
>2vdr_B (B:110-351) Integrin beta-3; cell adhesion/immune system, alternative splicing, platelet integrin ALPHAIIBBETA3, polymorphism, glycoprotein, cell adhesion, calcium; HET: NAG MAN; 2.40A {Homo sapiens} PDB: 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=99.44 E-value=3.6e-14 Score=103.02 Aligned_cols=190 Identities=16% Similarity=0.145 Sum_probs=106.8
Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 54313575055666666766631012331023012688765403101343220112555333410002456655410220
Q gi|254781108|r 147 AISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQK 226 (398)
Q Consensus 147 ~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 226 (398)
|+|++||+|.||||... ++.+|.++..+++.+..
T Consensus 2 PiDivfviD~SgSM~~~----------------------------------------------i~~~K~~i~~~~~~~~~ 35 (242)
T 2vdr_B 2 PVDIYYLMDLSYSMKDD----------------------------------------------LWSIQNLGTKLATQMRK 35 (242)
T ss_dssp CEEEEEEEECSGGGGGG----------------------------------------------HHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHH----------------------------------------------HHHHHHHHHHHHHHHHH
T ss_conf 86679999468687999----------------------------------------------99999999999999985
Q ss_pred CCCCCCCCCEEEEEEECCCCCC----------------------------CCCCCCCCCCHHHHHHHHHCCCCCCCCCHH
Q ss_conf 2768776521346541267765----------------------------431123568999999997357788874458
Q gi|254781108|r 227 AIQEKKNLSVRIGTIAYNIGIV----------------------------GNQCTPLSNNLNEVKSRLNKLNPYENTNTY 278 (398)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~lt~~~~~~~~~I~~l~~~G~T~~~ 278 (398)
...+ .|.+.+.|.+... .....+++.+...++..|+.+.+.|||...
T Consensus 36 ~~~~-----~r~~~v~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~i~~~~~~gGtd~~ 110 (242)
T 2vdr_B 36 LTSN-----LRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAP 110 (242)
T ss_dssp HCTT-----EEEEEEEECCCSSTTTSCCCSTHHHHCTTGGGTSCCCCCCSEEEEEEEESCHHHHHHHHHTCCCCCCSBSS
T ss_pred HCCC-----CEEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHEECCCCCCCC
T ss_conf 2867-----36977650202456522346665505866566665667633010266778899999998622153789877
Q ss_pred HHHHHHHHHHCCCCC-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCH--HHHHHHHHHHHCCCEEEEEEECCCCCHHH
Q ss_conf 899999996113466-666566766665169981588778777776631--48999999997898899999547975589
Q gi|254781108|r 279 PAMHHAYRELYNEKE-SSHNTIGSTRLKKFVIFITDGENSGASAYQNTL--NTLQICEYMRNAGMKIYSVAVSAPPEGQD 355 (398)
Q Consensus 279 ~gl~~a~~~l~~~~~-~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~--~~~~~c~~~K~~gi~IytIg~~~~~~~~~ 355 (398)
+++.+|.+.+..... .. ..++.+|+|||+|||..+......... ........+...++.+++++++.+ ....
T Consensus 111 e~~~~a~~~~~~~~~~~~----~r~~~~k~iilitD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 185 (242)
T 2vdr_B 111 EGGFDAIMQATVCDEKIG----WRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP-SLGL 185 (242)
T ss_dssp BCHHHHHHHHHHCHHHHT----CCTTSEEEEEEEESSCBCCTTGGGGGTCCSCCCCCCCCCTTSBCTTTTTSCCC-CHHH
T ss_pred CCHHHHHHHHHHHHCCCC----CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC-CHHH
T ss_conf 339999999986110167----78796699999886874435676533331478875032678864544547788-9999
Q ss_pred HHHHHHCCCCC-EEEECCHHHHHHHHHHHHHHHHHCEEEE
Q ss_conf 99998519981-8994698999999999999875124573
Q gi|254781108|r 356 LLRKCTDSSGQ-FFAVNDSRELLESFDKITDKIQEQSVRI 394 (398)
Q Consensus 356 ~l~~cAs~~~~-yy~a~~~~~L~~aF~~I~~~i~~~r~~~ 394 (398)
+++..+....+ ++.+++ +..++|+.|.+.+....+.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~ 223 (242)
T 2vdr_B 186 MTEKLSQKNINLIFAVTE--NVVNLYQNYSELIPGTTVGV 223 (242)
T ss_dssp HHHHHHHTTCEEEEEEEG--GGHHHHHHHHTTSTTCEEEE
T ss_pred HHHHHHHCCCEEEEEECH--HHHHHHHHHHHHCCCCEEEE
T ss_conf 999998629379999457--88889999987567654433