HHsearch alignment of GI: 254781108 and MMDB domain: 2vdr_B_110-351

>2vdr_B (B:110-351) Integrin beta-3; cell adhesion/immune system, alternative splicing, platelet integrin ALPHAIIBBETA3, polymorphism, glycoprotein, cell adhesion, calcium; HET: NAG MAN; 2.40A {Homo sapiens} PDB: 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=99.44  E-value=3.6e-14  Score=103.02  Aligned_cols=190  Identities=16%  Similarity=0.145  Sum_probs=106.8

Q ss_pred             CCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             54313575055666666766631012331023012688765403101343220112555333410002456655410220
Q gi|254781108|r  147 AISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQK  226 (398)
Q Consensus       147 ~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  226 (398)
                      |+|++||+|.||||...                                              ++.+|.++..+++.+..
T Consensus         2 PiDivfviD~SgSM~~~----------------------------------------------i~~~K~~i~~~~~~~~~   35 (242)
T 2vdr_B            2 PVDIYYLMDLSYSMKDD----------------------------------------------LWSIQNLGTKLATQMRK   35 (242)
T ss_dssp             CEEEEEEEECSGGGGGG----------------------------------------------HHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEECCCCHHHH----------------------------------------------HHHHHHHHHHHHHHHHH
T ss_conf             86679999468687999----------------------------------------------99999999999999985


Q ss_pred             CCCCCCCCCEEEEEEECCCCCC----------------------------CCCCCCCCCCHHHHHHHHHCCCCCCCCCHH
Q ss_conf             2768776521346541267765----------------------------431123568999999997357788874458
Q gi|254781108|r  227 AIQEKKNLSVRIGTIAYNIGIV----------------------------GNQCTPLSNNLNEVKSRLNKLNPYENTNTY  278 (398)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~lt~~~~~~~~~I~~l~~~G~T~~~  278 (398)
                      ...+     .|.+.+.|.+...                            .....+++.+...++..|+.+.+.|||...
T Consensus        36 ~~~~-----~r~~~v~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~i~~~~~~gGtd~~  110 (242)
T 2vdr_B           36 LTSN-----LRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAP  110 (242)
T ss_dssp             HCTT-----EEEEEEEECCCSSTTTSCCCSTHHHHCTTGGGTSCCCCCCSEEEEEEEESCHHHHHHHHHTCCCCCCSBSS
T ss_pred             HCCC-----CEEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHEECCCCCCCC
T ss_conf             2867-----36977650202456522346665505866566665667633010266778899999998622153789877


Q ss_pred             HHHHHHHHHHCCCCC-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCH--HHHHHHHHHHHCCCEEEEEEECCCCCHHH
Q ss_conf             899999996113466-666566766665169981588778777776631--48999999997898899999547975589
Q gi|254781108|r  279 PAMHHAYRELYNEKE-SSHNTIGSTRLKKFVIFITDGENSGASAYQNTL--NTLQICEYMRNAGMKIYSVAVSAPPEGQD  355 (398)
Q Consensus       279 ~gl~~a~~~l~~~~~-~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~--~~~~~c~~~K~~gi~IytIg~~~~~~~~~  355 (398)
                      +++.+|.+.+..... ..    ..++.+|+|||+|||..+.........  ........+...++.+++++++.+ ....
T Consensus       111 e~~~~a~~~~~~~~~~~~----~r~~~~k~iilitD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  185 (242)
T 2vdr_B          111 EGGFDAIMQATVCDEKIG----WRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYP-SLGL  185 (242)
T ss_dssp             BCHHHHHHHHHHCHHHHT----CCTTSEEEEEEEESSCBCCTTGGGGGTCCSCCCCCCCCCTTSBCTTTTTSCCC-CHHH
T ss_pred             CCHHHHHHHHHHHHCCCC----CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC-CHHH
T ss_conf             339999999986110167----78796699999886874435676533331478875032678864544547788-9999


Q ss_pred             HHHHHHCCCCC-EEEECCHHHHHHHHHHHHHHHHHCEEEE
Q ss_conf             99998519981-8994698999999999999875124573
Q gi|254781108|r  356 LLRKCTDSSGQ-FFAVNDSRELLESFDKITDKIQEQSVRI  394 (398)
Q Consensus       356 ~l~~cAs~~~~-yy~a~~~~~L~~aF~~I~~~i~~~r~~~  394 (398)
                      +++..+....+ ++.+++  +..++|+.|.+.+....+.+
T Consensus       186 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~  223 (242)
T 2vdr_B          186 MTEKLSQKNINLIFAVTE--NVVNLYQNYSELIPGTTVGV  223 (242)
T ss_dssp             HHHHHHHTTCEEEEEEEG--GGHHHHHHHHTTSTTCEEEE
T ss_pred             HHHHHHHCCCEEEEEECH--HHHHHHHHHHHHCCCCEEEE
T ss_conf             999998629379999457--88889999987567654433