HHsearch results for GI: 254781108 and protein with PDBid: 1atz_A
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 2adf_A 1fe8_A 1ao3_A
Probab=99.70 E-value=6.9e-16 Score=112.39 Aligned_cols=177 Identities=11% Similarity=0.132 Sum_probs=125.5
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 65431357505566666676663101233102301268876540310134322011255533341000245665541022
Q gi|254781108|r 146 LAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQ 225 (398)
Q Consensus 146 ~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 225 (398)
.++|+++++|.|+||.... .+..+..+..++..+.
T Consensus 4 ~~~DivfllD~S~s~~~~~---------------------------------------------~~~~k~fv~~~i~~~~ 38 (189)
T 1atz_A 4 QPLDVILLLDGSSSFPASY---------------------------------------------FDEMKSFAKAFISKAN 38 (189)
T ss_dssp CCEEEEEEEECSSSSCHHH---------------------------------------------HHHHHHHHHHHHHHSC
T ss_pred CCEEEEEEEECCCCCCHHH---------------------------------------------HHHHHHHHHHHHHHCC
T ss_conf 8578999994879988689---------------------------------------------9999999999999707
Q ss_pred HCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCC-CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 027687765213465412677654311235689999999973577-8887445889999999611346666656676666
Q gi|254781108|r 226 KAIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNKLN-PYENTNTYPAMHHAYRELYNEKESSHNTIGSTRL 304 (398)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~l~-~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~~ 304 (398)
- .....|.+.+.|..............+...+...|+.+. ++|+|+++.+|.++.+.++....+.+ ++.
T Consensus 39 i-----~~~~~rv~vv~y~~~~~~~~~l~~~~~~~~~~~~i~~l~~~gg~t~~~~al~~a~~~~~~~~~g~R-----~~a 108 (189)
T 1atz_A 39 I-----GPRLTQVSVLQYGSITTIDVPWNVVPEKAHLLSLVDVMQREGGPSQIGDALGFAVRYLTSEMHGAR-----PGA 108 (189)
T ss_dssp B-----STTSEEEEEEEESSSEEEEECTTCCCCHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHHSCCTTCC-----TTS
T ss_pred C-----CCCCCEEEEEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC-----CCC
T ss_conf 5-----888748999997501389998523675899999999887437787632578999999740102799-----988
Q ss_pred CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCC--CCEEEECCHHHHHHHHHH
Q ss_conf 516998158877877777663148999999997898899999547975589999985199--818994698999999999
Q gi|254781108|r 305 KKFVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPPEGQDLLRKCTDSS--GQFFAVNDSRELLESFDK 382 (398)
Q Consensus 305 ~k~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~~~~~~l~~cAs~~--~~yy~a~~~~~L~~aF~~ 382 (398)
.|++|++|||..+. ....+++.+|+.||+||+||+|. ..+...|+..|+.| ++.|.+.+.++|.. +..
T Consensus 109 ~k~vvlltdg~~~~--------~~~~~~~~lk~~~i~v~~igig~-~~~~~~l~~ia~~~~~~~~~~~~~~~~l~~-l~~ 178 (189)
T 1atz_A 109 SKAVVILVTDVSVD--------SVDAAADAARSNRVTVFPIGIGD-RYDAAQLRILAGPAGDSNVVKLQRIEDLPT-MVT 178 (189)
T ss_dssp EEEEEEEECSCCSS--------CCHHHHHHHHHTTEEEEEEEESS-SSCHHHHHHHTGGGGGGGCEEESSTTHHHH-HHH
T ss_pred EEEEEEEECCCCCC--------CHHHHHHHHHHCCCEEEEEEECC-CCCHHHHHHHHCCCCCCCEEEECCHHHHHH-HHH
T ss_conf 05899992599865--------18999999998899999999588-699999999857888775899468766888-999
Q ss_pred HHHHH
Q ss_conf 99987
Q gi|254781108|r 383 ITDKI 387 (398)
Q Consensus 383 I~~~i 387 (398)
|.++|
T Consensus 179 ~~~~~ 183 (189)
T 1atz_A 179 LGNSF 183 (189)
T ss_dssp SCSHH
T ss_pred HHHHH
T ss_conf 99999