HHsearch results for GI: 254781108 and protein with PDBid: 1q0p_A
>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=99.79 E-value=1.3e-18 Score=128.85 Aligned_cols=191 Identities=21% Similarity=0.244 Sum_probs=135.3
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 56543135750556666667666310123310230126887654031013432201125553334100024566554102
Q gi|254781108|r 145 NLAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSI 224 (398)
Q Consensus 145 ~~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 224 (398)
..++|++++||.||||... +.+..+.++..++..+
T Consensus 13 ~~~~DivfvlD~SgSm~~~---------------------------------------------~~~~~k~~~~~li~~~ 47 (223)
T 1q0p_A 13 SGSMNIYLVLDGSDSIGAS---------------------------------------------NFTGAKKSLVNLIEKV 47 (223)
T ss_dssp --CEEEEEEEECSTTTCHH---------------------------------------------HHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEECCCCCCHH---------------------------------------------HHHHHHHHHHHHHHHH
T ss_conf 8986189999488888828---------------------------------------------8999999999999973
Q ss_pred HHCCCCCCCCCEEEEEEECCCCCCCCCCCCC----CCCHHHHHHHHHCCC-----CCCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf 2027687765213465412677654311235----689999999973577-----8887445889999999611346666
Q gi|254781108|r 225 QKAIQEKKNLSVRIGTIAYNIGIVGNQCTPL----SNNLNEVKSRLNKLN-----PYENTNTYPAMHHAYRELYNEKESS 295 (398)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----t~~~~~~~~~I~~l~-----~~G~T~~~~gl~~a~~~l~~~~~~~ 295 (398)
.... ...+.+.+.|++.... ..++ ..+...+...++.+. .+|+|++..+|..+.+.+.......
T Consensus 48 ~~~~-----~~~rvgvv~fs~~~~~--~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~g~T~~~~Al~~a~~~~~~~~~~~ 120 (223)
T 1q0p_A 48 ASYG-----VKPRYGLVTYATYPKI--WVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVP 120 (223)
T ss_dssp HTTT-----CCCEEEEEEESSSEEE--EECTTSGGGGCHHHHHHHHHTCCTTSCSCTTCCCHHHHHHHHHHHHCCTTSSC
T ss_pred CCCC-----CCCEEEEEEECCCEEE--EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 3688-----7758999997593789--97078630245678999998545421668889759999999999986401146
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHH-------HHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCC---
Q ss_conf 65667666651699815887787777766314899-------99999978988999995479755899999851998---
Q gi|254781108|r 296 HNTIGSTRLKKFVIFITDGENSGASAYQNTLNTLQ-------ICEYMRNAGMKIYSVAVSAPPEGQDLLRKCTDSSG--- 365 (398)
Q Consensus 296 ~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~-------~c~~~K~~gi~IytIg~~~~~~~~~~l~~cAs~~~--- 365 (398)
. .......|++||+|||..+.+........... .+..++..|+.+|+||+|. ..+...|+.+|+.++
T Consensus 121 ~--~~~~~~~~~ivllTDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~igvg~-~~~~~~L~~iAs~~~~~~ 197 (223)
T 1q0p_A 121 P--EGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGP-LVNQVNINALASKKDNEQ 197 (223)
T ss_dssp C--TTGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSCBTTBCCGGGEEEEEEECSS-CCCHHHHHHHSCCCTTCC
T ss_pred C--CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC-CCCHHHHHHHHCCCCCCE
T ss_conf 6--6677774289997688767789828999999863346799999876796599973687-569999999974989974
Q ss_pred CEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 1899469899999999999987512
Q gi|254781108|r 366 QFFAVNDSRELLESFDKITDKIQEQ 390 (398)
Q Consensus 366 ~yy~a~~~~~L~~aF~~I~~~i~~~ 390 (398)
+||.+.+.++|.++|.+|.++...+
T Consensus 198 ~~~~~~d~~~L~~~~~~i~~e~~s~ 222 (223)
T 1q0p_A 198 HVFKVKDMENLEDVFYQMIDESQSL 222 (223)
T ss_dssp CEEETTC-----------------C
T ss_pred EEEECCCHHHHHHHHHHHHHHHCCC
T ss_conf 7999089999999999999861478