HHsearch results for GI: 254781108 and protein with PDBid: 2iue_A
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=99.20 E-value=1.1e-09 Score=75.27 Aligned_cols=162 Identities=13% Similarity=0.105 Sum_probs=105.2
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 65431357505566666676663101233102301268876540310134322011255533341000245665541022
Q gi|254781108|r 146 LAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQ 225 (398)
Q Consensus 146 ~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 225 (398)
.|+|++||+|.||||.. ++..+|.++..++..+.
T Consensus 2 ~pvDl~fviD~SgSM~~----------------------------------------------~i~~~k~~~~~l~~~l~ 35 (212)
T 2iue_A 2 NSVDLYFLMGLSGSAQG----------------------------------------------HLSNVQTLGSDLLKALN 35 (212)
T ss_dssp CCEEEEEEEECCGGGTT----------------------------------------------THHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCHHH----------------------------------------------HHHHHHHHHHHHHHHHH
T ss_conf 84689999988805267----------------------------------------------99999999999999997
Q ss_pred HCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC----CHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 02768776521346541267765431123568999999997357788874----45889999999611346666656676
Q gi|254781108|r 226 KAIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNKLNPYENT----NTYPAMHHAYRELYNEKESSHNTIGS 301 (398)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~l~~~G~T----~~~~gl~~a~~~l~~~~~~~~~~~~~ 301 (398)
... ...|.+.+.|.+... ....+++.+...++.+|+.+.+.||+ +...||.++...+...+ .
T Consensus 36 ~~~-----~~~r~g~v~f~d~~~-~~~~~~t~~~~~~~~~i~~~~~~gg~d~~e~~~~al~~a~~~~~~~~--------~ 101 (212)
T 2iue_A 36 EIS-----RSGRIGFGSIVNMTF-QHILKLTADSSQFQRELRKQLVSGKLATPKGQLDAVVQVAICLGEIG--------W 101 (212)
T ss_dssp HHC-----SCEEEEEEEESSSCE-EEEEEEESCHHHHHHHHHTCCCCCCSSSSBCHHHHHHHHHHCHHHHT--------C
T ss_pred HCC-----CCEEEEEEECCCCCC-CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC--------C
T ss_conf 269-----870899997056434-33465576399999998630214898885069999999998766437--------7
Q ss_pred CCCCEEEEECCCCCCCCCCCCC-------------------------CCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH
Q ss_conf 6665169981588778777776-------------------------631489999999978988999995479755899
Q gi|254781108|r 302 TRLKKFVIFITDGENSGASAYQ-------------------------NTLNTLQICEYMRNAGMKIYSVAVSAPPEGQDL 356 (398)
Q Consensus 302 ~~~~k~iillTDG~~~~~~~~~-------------------------~~~~~~~~c~~~K~~gi~IytIg~~~~~~~~~~ 356 (398)
....|+|||+|||......... +......++..+++++|..+... .....+.
T Consensus 102 ~~~~~~ivl~tD~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~~i~~~---~~~~~~~ 178 (212)
T 2iue_A 102 RNGTRFLVLVTDNDFHLAKDKTLGTRQNTSDGRCHLDDGMYRSRGEPDYQSVVQLASKLAENNIQPIFVV---PSRMVKT 178 (212)
T ss_dssp CSSEEEEEEECSSCBCCTTGGGGGTCCSCCCSSCCBSSSBBGGGGSSCCCCHHHHHHHHHHHTCEEEEEE---EHHHHHH
T ss_pred CCCCEEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE---CCCHHHH
T ss_conf 7773599999689865566302444531158715752565356777677779999999986397589997---4532789
Q ss_pred HHHHHC-CCCCEEEE
Q ss_conf 999851-99818994
Q gi|254781108|r 357 LRKCTD-SSGQFFAV 370 (398)
Q Consensus 357 l~~cAs-~~~~yy~a 370 (398)
++..+. .++.++..
T Consensus 179 ~~~l~~~~~g~~v~~ 193 (212)
T 2iue_A 179 YEKLTTFIPKLTIGE 193 (212)
T ss_dssp HHHHHHHSTTCEEEE
T ss_pred HHHHHHHCCCCCHHH
T ss_conf 999999738741266