HHsearch results for GI: 254781108 and protein with PDBid: 3fcs_B
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, alternative splicing, cell adhesion, disease mutation, glycoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.58 E-value=1.7e-06 Score=56.11 Aligned_cols=135 Identities=12% Similarity=0.186 Sum_probs=77.9
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCC------------
Q ss_conf 3112356899999999735778887445889-999999611346666656676666516998158877------------
Q gi|254781108|r 250 NQCTPLSNNLNEVKSRLNKLNPYENTNTYPA-MHHAYRELYNEKESSHNTIGSTRLKKFVIFITDGEN------------ 316 (398)
Q Consensus 250 ~~~~~lt~~~~~~~~~I~~l~~~G~T~~~~g-l~~a~~~l~~~~~~~~~~~~~~~~~k~iillTDG~~------------ 316 (398)
...++||.+...+..+|++...+|+-...+| |.-.++...-...-.|+ ...+|++||.||...
T Consensus 191 ~~~~~lt~~~~~f~~~v~~~~~s~n~d~pe~~~dal~q~~vc~~~igwr----~~~~~~~v~~tD~~~H~agDg~l~gi~ 266 (690)
T 3fcs_B 191 KHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWR----NDASHLLVFTTDAKTHIALDGRLAGIV 266 (690)
T ss_dssp EEEEEEESCHHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHCHHHHTCC----SSSEEEEEEEESSCBCCTTGGGGGTCC
T ss_pred EEECCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCC----CCCEEEEEEEECCCCCCCCCCCCEEEE
T ss_conf 4654566678999998752551168778750466787765231223567----897699999806731125665423563
Q ss_pred --CCCCCCC-----------CCH-HHHHHHHHHHHCCCE-EEEEEECCCCCHHHHHHHHHC-CCC-C-EEEECCHHHHHH
Q ss_conf --8777776-----------631-489999999978988-999995479755899999851-998-1-899469899999
Q gi|254781108|r 317 --SGASAYQ-----------NTL-NTLQICEYMRNAGMK-IYSVAVSAPPEGQDLLRKCTD-SSG-Q-FFAVNDSRELLE 378 (398)
Q Consensus 317 --~~~~~~~-----------~~~-~~~~~c~~~K~~gi~-IytIg~~~~~~~~~~l~~cAs-~~~-~-yy~a~~~~~L~~ 378 (398)
|.+.-+. ..+ ....+..++++++|. ||.|.-. ...+.+..+. -++ . .-...+++.|.+
T Consensus 267 ~pnd~~chl~~~~~y~~~~~~dyPs~~q~~~~l~~~~i~~ifavt~~----~~~~y~~l~~~~~~~~~~~l~~dssnv~~ 342 (690)
T 3fcs_B 267 QPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTEN----VVNLYQNYSELIPGTTVGVLSMDSSNVLQ 342 (690)
T ss_dssp SCCCCCCCBCTTCBBGGGGTSCCCCHHHHHHHHHHTTCEEEEEEEGG----GHHHHHHHHHHSTTCEEEEECTTCTTHHH
T ss_pred CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCC----CCCHHHHHHHHCCCCEEEECCCCCHHHHH
T ss_conf 16776114079885255676778999999999987296799997665----40068999975487526870578615999
Q ss_pred HHHHHHHHHHHCEE
Q ss_conf 99999998751245
Q gi|254781108|r 379 SFDKITDKIQEQSV 392 (398)
Q Consensus 379 aF~~I~~~i~~~r~ 392 (398)
..++..++|.+.+.
T Consensus 343 li~~~y~~~~s~v~ 356 (690)
T 3fcs_B 343 LIVDAYGKIRSKVE 356 (690)
T ss_dssp HHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHCEEE
T ss_conf 99999987526467