HHsearch results for GI: 254781108 and protein with PDBid: 3ibs_A

>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for structural genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=99.68  E-value=2.9e-15  Score=108.70  Aligned_cols=175  Identities=17%  Similarity=0.303  Sum_probs=128.7

Q ss_pred             CCCCCEEEECCCCCCCCCCCCCCCCHHHHHCCCEECCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             65431357505566666676663101233102301268876540310134322011255533341000245665541022
Q gi|254781108|r  146 LAISICMVLDVSRSMEDLYLQKHNDNNNMTSNKYLLPPPPKKSFWSKNTTKSKYAPAPAPANRKIDVLIESAGNLVNSIQ  225 (398)
Q Consensus       146 ~~~di~lvlD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  225 (398)
                      ..+|++||+|.||||.....                                        ..+|++.++.++..+++.+.
T Consensus        10 ~g~divlvvD~SgSM~~~D~----------------------------------------~~~R~~~ak~~~~~~l~~~~   49 (218)
T 3ibs_A           10 KGVEVIIALDISNSMLAQDV----------------------------------------QPSRLEKAKRLISRLVDELD   49 (218)
T ss_dssp             CCCEEEEEEECSGGGGCCSS----------------------------------------SSCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEEEECCCCCCCCCC----------------------------------------CCCHHHHHHHHHHHHHHHCC
T ss_conf             79589999979857788777----------------------------------------84899999999999995099


Q ss_pred             HCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCC----CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             027687765213465412677654311235689999999973577----8887445889999999611346666656676
Q gi|254781108|r  226 KAIQEKKNLSVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNKLN----PYENTNTYPAMHHAYRELYNEKESSHNTIGS  301 (398)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~l~----~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~  301 (398)
                               ..+.+.+.|....  ....+++.+.......+..+.    +.|||++..+|.++...|...          
T Consensus        50 ---------~~rvglv~F~~~~--~~~~~~t~~~~~~~~~~~~~~~~~~~~~gT~~~~al~~a~~~l~~~----------  108 (218)
T 3ibs_A           50 ---------NDKVGMIVFAGDA--FTQLPITSDYISAKMFLESISPSLISKQGTAIGEAINLATRSFTPQ----------  108 (218)
T ss_dssp             ---------SCEEEEEEESSSE--EEEEEEESCHHHHHHHHHTCCGGGCCSCSCCHHHHHHHHHTTSCSC----------
T ss_pred             ---------CCEEEEEEECCCC--CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH----------
T ss_conf             ---------9769999976844--2011243067788888875221456689963789999999874120----------


Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCC------------------------HHHHH
Q ss_conf             666516998158877877777663148999999997898899999547975------------------------58999
Q gi|254781108|r  302 TRLKKFVIFITDGENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAPPE------------------------GQDLL  357 (398)
Q Consensus       302 ~~~~k~iillTDG~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~~~------------------------~~~~l  357 (398)
                      ....|+|||+|||+++...       .......++..++.+|+++++.+..                        +..+|
T Consensus       109 ~~~~~~iillSDG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~L  181 (218)
T 3ibs_A          109 EGVGRAIIVITDGENHEGG-------AVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMC  181 (218)
T ss_dssp             SSCCEEEEEEECCTTCCSC-------HHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHH
T ss_pred             CCCCCEEEEECCCCCCCCC-------HHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             2677679996589988761-------389999998769879999862687862112267752214677624332699999


Q ss_pred             HHHHC-CCCCEEEECCHHHHHHHHHHHHHHHH
Q ss_conf             99851-99818994698999999999999875
Q gi|254781108|r  358 RKCTD-SSGQFFAVNDSRELLESFDKITDKIQ  388 (398)
Q Consensus       358 ~~cAs-~~~~yy~a~~~~~L~~aF~~I~~~i~  388 (398)
                      +.+|. ++|.||.+++.++|.++|.+.-+++.
T Consensus       182 ~~iA~~tgG~y~~~~~~~~~~~~i~~~I~~l~  213 (218)
T 3ibs_A          182 QEIAKDGKGIYVRVDNSNSAQKAISQEISKMA  213 (218)
T ss_dssp             HHHHHHTEEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHC
T ss_conf             99999649189995287999999999997542