HHsearch results for GI: 254781108 and protein with PDBid: 3k6s_A

>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=99.14  E-value=1.5e-11  Score=86.30  Aligned_cols=149  Identities=18%  Similarity=0.217  Sum_probs=104.3

Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCC-CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf             213465412677654311235689999999973577-8887445889999999611346666656676666516998158
Q gi|254781108|r  235 SVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNKLN-PYENTNTYPAMHHAYRELYNEKESSHNTIGSTRLKKFVIFITD  313 (398)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~l~-~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~~~k~iillTD  313 (398)
                      ..+.+.+.|.....................+++.+. .+|.|++..|+..+...++....+.     .++.+|++|++||
T Consensus       166 ~~qvg~vqys~~~~~~f~l~d~~~~~~~~~~v~~i~~~~g~T~Ta~ai~~~~~~~f~~~~g~-----r~~a~kv~IviTD  240 (1095)
T 3k6s_A          166 STQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGA-----RRDAAKILIVITD  240 (1095)
T ss_dssp             SEEEEEEEESSSEEEEECSHHHHSCSCGGGGTTTCCCCCSCBCHHHHHHHHHTTTTSTTTTC-----CSSSEEEEEEEES
T ss_pred             CEEEEEEEECCCEEEEEEHHHCCCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCC-----CCCCCEEEEEEEC
T ss_conf             54999996137325888703433330267875414613674307888999999763164268-----8898417999926


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC---CCHHHHHHHHHCCCC--CEEEECCHHHHHHHHHHHHHHHH
Q ss_conf             8778777776631489999999978988999995479---755899999851998--18994698999999999999875
Q gi|254781108|r  314 GENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAP---PEGQDLLRKCTDSSG--QFFAVNDSRELLESFDKITDKIQ  388 (398)
Q Consensus       314 G~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~---~~~~~~l~~cAs~~~--~yy~a~~~~~L~~aF~~I~~~i~  388 (398)
                      |+-....     .......+.++.+||.+|.||++..   ......|+.+|++|+  ++|.+++.++|.++...+.++|.
T Consensus       241 G~s~~d~-----~~l~~~i~~~~~~gI~~~aIGvg~~~~~~~~~~eL~~iAs~p~~~~~f~v~~~~aL~~i~~~L~~~i~  315 (1095)
T 3k6s_A          241 GKKEGDS-----LDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIF  315 (1095)
T ss_dssp             SCCBSCS-----SCHHHHHHHHHHHCEEECCEEBSSGGGSTTSSHHHHTTSCSSTTTSCCCBSCSGGGGSSTTTHHHHHH
T ss_pred             CCCCCCC-----CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCE
T ss_conf             8645673-----20344444586489289999725432564335354212058874038993555776677776416525


Q ss_pred             HCEEE
Q ss_conf             12457
Q gi|254781108|r  389 EQSVR  393 (398)
Q Consensus       389 ~~r~~  393 (398)
                      .+...
T Consensus       316 ~ieg~  320 (1095)
T 3k6s_A          316 AIEGT  320 (1095)
T ss_dssp             TCCCC
T ss_pred             EEECC
T ss_conf             64545