HHsearch results for GI: 254781108 and protein with PDBid: 3k6s_A
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=99.14 E-value=1.5e-11 Score=86.30 Aligned_cols=149 Identities=18% Similarity=0.217 Sum_probs=104.3
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCC-CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 213465412677654311235689999999973577-8887445889999999611346666656676666516998158
Q gi|254781108|r 235 SVRIGTIAYNIGIVGNQCTPLSNNLNEVKSRLNKLN-PYENTNTYPAMHHAYRELYNEKESSHNTIGSTRLKKFVIFITD 313 (398)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~I~~l~-~~G~T~~~~gl~~a~~~l~~~~~~~~~~~~~~~~~k~iillTD 313 (398)
..+.+.+.|.....................+++.+. .+|.|++..|+..+...++....+. .++.+|++|++||
T Consensus 166 ~~qvg~vqys~~~~~~f~l~d~~~~~~~~~~v~~i~~~~g~T~Ta~ai~~~~~~~f~~~~g~-----r~~a~kv~IviTD 240 (1095)
T 3k6s_A 166 STQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGA-----RRDAAKILIVITD 240 (1095)
T ss_dssp SEEEEEEEESSSEEEEECSHHHHSCSCGGGGTTTCCCCCSCBCHHHHHHHHHTTTTSTTTTC-----CSSSEEEEEEEES
T ss_pred CEEEEEEEECCCEEEEEEHHHCCCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCC-----CCCCCEEEEEEEC
T ss_conf 54999996137325888703433330267875414613674307888999999763164268-----8898417999926
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC---CCHHHHHHHHHCCCC--CEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 8778777776631489999999978988999995479---755899999851998--18994698999999999999875
Q gi|254781108|r 314 GENSGASAYQNTLNTLQICEYMRNAGMKIYSVAVSAP---PEGQDLLRKCTDSSG--QFFAVNDSRELLESFDKITDKIQ 388 (398)
Q Consensus 314 G~~~~~~~~~~~~~~~~~c~~~K~~gi~IytIg~~~~---~~~~~~l~~cAs~~~--~yy~a~~~~~L~~aF~~I~~~i~ 388 (398)
|+-.... .......+.++.+||.+|.||++.. ......|+.+|++|+ ++|.+++.++|.++...+.++|.
T Consensus 241 G~s~~d~-----~~l~~~i~~~~~~gI~~~aIGvg~~~~~~~~~~eL~~iAs~p~~~~~f~v~~~~aL~~i~~~L~~~i~ 315 (1095)
T 3k6s_A 241 GKKEGDS-----LDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIF 315 (1095)
T ss_dssp SCCBSCS-----SCHHHHHHHHHHHCEEECCEEBSSGGGSTTSSHHHHTTSCSSTTTSCCCBSCSGGGGSSTTTHHHHHH
T ss_pred CCCCCCC-----CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCE
T ss_conf 8645673-----20344444586489289999725432564335354212058874038993555776677776416525
Q ss_pred HCEEE
Q ss_conf 12457
Q gi|254781108|r 389 EQSVR 393 (398)
Q Consensus 389 ~~r~~ 393 (398)
.+...
T Consensus 316 ~ieg~ 320 (1095)
T 3k6s_A 316 AIEGT 320 (1095)
T ss_dssp TCCCC
T ss_pred EEECC
T ss_conf 64545